RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 MORC3Q14149 939 aa25.03■■□□□ 1.6
SYNDIG1-201ENST00000376862 C1orf141Q5JVX7 400 aa25.03■■□□□ 1.6
SYNDIG1-201ENST00000376862 MCTP2Q6DN12 878 aa25.03■■□□□ 1.6
SYNDIG1-201ENST00000376862 COPS6Q7L5N1 327 aa25.03■■□□□ 1.6
SYNDIG1-201ENST00000376862 FOXP2O15409 715 aa25.03■■□□□ 1.6
SYNDIG1-201ENST00000376862 RNF216Q9NWF9 866 aaPredicted RBP25.03■■□□□ 1.6
SYNDIG1-201ENST00000376862 DACH1Q9UI36 760 aa25.03■■□□□ 1.6
SYNDIG1-201ENST00000376862 AARSP49588 968 aaKnown RBP eCLIP25.02■■□□□ 1.6
SYNDIG1-201ENST00000376862 RABL6Q3YEC7 729 aaPredicted RBP25.02■■□□□ 1.6
SYNDIG1-201ENST00000376862 WDR93Q6P2C0 686 aa25.02■■□□□ 1.6
SYNDIG1-201ENST00000376862 RIN2Q8WYP3 895 aaPredicted RBP25.02■■□□□ 1.6
SYNDIG1-201ENST00000376862 SERTAD1Q9UHV2 236 aa25.02■■□□□ 1.6
SYNDIG1-201ENST00000376862 RXRAP19793 462 aa25.02■■□□□ 1.6
SYNDIG1-201ENST00000376862 IMMTQ16891 758 aaKnown RBP25.02■■□□□ 1.6
SYNDIG1-201ENST00000376862 APTXQ7Z2E3 356 aaKnown RBP25.02■■□□□ 1.6
SYNDIG1-201ENST00000376862 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.02■■□□□ 1.6
SYNDIG1-201ENST00000376862 MYH8P13535 1937 aa25.01■■□□□ 1.59
SYNDIG1-201ENST00000376862 GRIN1Q05586 938 aa25.01■■□□□ 1.59
SYNDIG1-201ENST00000376862 SEC31BQ9NQW1 1179 aa25.01■■□□□ 1.59
SYNDIG1-201ENST00000376862 DDX60Q8IY21 1712 aaKnown RBP25.01■■□□□ 1.59
SYNDIG1-201ENST00000376862 MFAP3LO75121 409 aa25.01■■□□□ 1.59
SYNDIG1-201ENST00000376862 CASP14P31944 242 aa25.01■■□□□ 1.59
SYNDIG1-201ENST00000376862 EIF5P55010 431 aaKnown RBP25.01■■□□□ 1.59
SYNDIG1-201ENST00000376862 AKAP17AQ02040 695 aaKnown RBP25.01■■□□□ 1.59
SYNDIG1-201ENST00000376862 KAT2BQ92831 832 aa25.01■■□□□ 1.59
SYNDIG1-201ENST00000376862 PHKBQ93100 1093 aa25.01■■□□□ 1.59
SYNDIG1-201ENST00000376862 VIPAS39Q9H9C1 493 aa25.01■■□□□ 1.59
SYNDIG1-201ENST00000376862 POLR2DO15514 142 aaKnown RBP25■■□□□ 1.59
SYNDIG1-201ENST00000376862 TUBBP07437 444 aa25■■□□□ 1.59
SYNDIG1-201ENST00000376862 SARSP49591 514 aaKnown RBP25■■□□□ 1.59
SYNDIG1-201ENST00000376862 HPCAL4Q9UM19 191 aa25■■□□□ 1.59
SYNDIG1-201ENST00000376862 NT5DC1Q5TFE4 455 aa25■■□□□ 1.59
SYNDIG1-201ENST00000376862 ANKLE2Q86XL3 938 aa25■■□□□ 1.59
SYNDIG1-201ENST00000376862 KRI1Q8N9T8 703 aaKnown RBP25■■□□□ 1.59
SYNDIG1-201ENST00000376862 MYO6Q9UM54 1294 aa25■■□□□ 1.59
SYNDIG1-201ENST00000376862 TTF2Q9UNY4 1162 aaKnown RBP25■■□□□ 1.59
SYNDIG1-201ENST00000376862 FGAP02671 866 aa24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 LIG3P49916 1009 aa24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 PLCD1P51178 756 aa24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 SWT1Q5T5J6 900 aaKnown RBP24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 CTCFLQ8NI51 663 aaPredicted RBP24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 CDHR2Q9BYE9 1310 aa24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 AFDNP55196 1824 aaKnown RBP24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 ECM29Q5VYK3 1845 aa24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 EXOC5O00471 708 aa24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 IFIT1P09914 478 aaKnown RBP24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 STK11IPQ8N1F8 1099 aa24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 NCOA7Q8NI08 942 aa24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 SECISBP2LQ93073 1101 aaKnown RBP24.99■■□□□ 1.59
SYNDIG1-201ENST00000376862 PBX1P40424 430 aa24.98■■□□□ 1.59
SYNDIG1-201ENST00000376862 ARHGAP25P42331 645 aa24.98■■□□□ 1.59
SYNDIG1-201ENST00000376862 AMPD2Q01433 879 aa24.98■■□□□ 1.59
SYNDIG1-201ENST00000376862 RALYLQ86SE5 291 aaKnown RBP24.98■■□□□ 1.59
SYNDIG1-201ENST00000376862 SMARCC1Q92922 1105 aaPredicted RBP24.98■■□□□ 1.59
SYNDIG1-201ENST00000376862 ZC3H4Q9UPT8 1303 aaKnown RBP24.98■■□□□ 1.59
SYNDIG1-201ENST00000376862 USP54Q70EL1 1684 aa24.98■■□□□ 1.59
SYNDIG1-201ENST00000376862 ERLIN2O94905 339 aa24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 PIP4K2AP48426 406 aaPredicted RBP24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 FXR1P51114 621 aaKnown RBP eCLIP24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 ELOA2Q8IYF1 753 aaPredicted RBP24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 CCDC148Q8NFR7 591 aa24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 GDAP1L1Q96MZ0 367 aa24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 ZMYM6O95789 1325 aa24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 ATP5J2-PTCD1G3V325 749 aa24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 PTCD1O75127 700 aaKnown RBP24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 STX17P56962 302 aa24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 HSP90AB3PQ58FF7 597 aa24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 LMBR1LQ6UX01 489 aa24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 CCDC91Q7Z6B0 441 aa24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 DENND2AQ9ULE3 1009 aa24.97■■□□□ 1.59
SYNDIG1-201ENST00000376862 UBE2Q2LH0YL09 131 aa24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 CCT5P48643 541 aa24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 MMP14P50281 582 aa24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 ERVK-24P63145 666 aa24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 SLC39A6Q13433 755 aa24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 ATG9AQ7Z3C6 839 aa24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 GYPCP04921 128 aa24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 METAP2P50579 478 aaKnown RBP eCLIP24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 WASHC4Q2M389 1173 aa24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 CEP89Q96ST8 783 aa24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 ADD3Q9UEY8 706 aaKnown RBP24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 PHF8Q9UPP1 1060 aa24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 C5P01031 1676 aa24.96■■□□□ 1.59
SYNDIG1-201ENST00000376862 USP14P54578 494 aa24.95■■□□□ 1.59
SYNDIG1-201ENST00000376862 TRDNQ13061 729 aa24.95■■□□□ 1.59
SYNDIG1-201ENST00000376862 KLHL10Q6JEL2 608 aa24.95■■□□□ 1.59
SYNDIG1-201ENST00000376862 ANKRD13DQ6ZTN6 518 aa24.95■■□□□ 1.59
SYNDIG1-201ENST00000376862 NKX2-3Q8TAU0 364 aa24.95■■□□□ 1.59
SYNDIG1-201ENST00000376862 CPDO75976 1380 aa24.95■■□□□ 1.58
SYNDIG1-201ENST00000376862 A0A087WZG4 1122 aa24.95■■□□□ 1.58
SYNDIG1-201ENST00000376862 GGCXP38435 758 aa24.95■■□□□ 1.58
SYNDIG1-201ENST00000376862 AMOTQ4VCS5 1084 aa24.95■■□□□ 1.58
SYNDIG1-201ENST00000376862 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.95■■□□□ 1.58
SYNDIG1-201ENST00000376862 PSEN1P49768 467 aa24.94■■□□□ 1.58
SYNDIG1-201ENST00000376862 STIM1Q13586 685 aa24.94■■□□□ 1.58
SYNDIG1-201ENST00000376862 FAM107BQ9H098 131 aa24.94■■□□□ 1.58
SYNDIG1-201ENST00000376862 KAT14Q9H8E8 782 aa24.94■■□□□ 1.58
SYNDIG1-201ENST00000376862 WWC3Q9ULE0 1092 aa24.94■■□□□ 1.58
SYNDIG1-201ENST00000376862 SIPA1L3O60292 1781 aaPredicted RBP24.94■■□□□ 1.58
SYNDIG1-201ENST00000376862 SHOX2O60902 331 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms