RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 UBE2Q2LH0YL09 131 aa23.42■■□□□ 1.34
VSX1-202ENST00000376709 KIAA2012Q0VF49 1180 aa23.42■■□□□ 1.34
VSX1-202ENST00000376709 CCDC82Q8N4S0 544 aa23.42■■□□□ 1.34
VSX1-202ENST00000376709 TDRD7Q8NHU6 1098 aaKnown RBP23.42■■□□□ 1.34
VSX1-202ENST00000376709 MYH2Q9UKX2 1941 aa23.42■■□□□ 1.34
VSX1-202ENST00000376709 CYP2D7A0A087X1C5 515 aa23.41■■□□□ 1.34
VSX1-202ENST00000376709 SMIM22K7EJ46 135 aa23.41■■□□□ 1.34
VSX1-202ENST00000376709 U2AF2P26368 475 aaKnown RBP eCLIP23.41■■□□□ 1.34
VSX1-202ENST00000376709 RCAN1P53805 252 aa23.41■■□□□ 1.34
VSX1-202ENST00000376709 SLC39A14Q15043 492 aa23.41■■□□□ 1.34
VSX1-202ENST00000376709 FANCBQ8NB91 859 aa23.41■■□□□ 1.34
VSX1-202ENST00000376709 SPC24Q8NBT2 197 aa23.41■■□□□ 1.34
VSX1-202ENST00000376709 TTC12Q9H892 705 aaPredicted RBP23.41■■□□□ 1.34
VSX1-202ENST00000376709 AATFQ9NY61 560 aaKnown RBP eCLIP23.41■■□□□ 1.34
VSX1-202ENST00000376709 DUOX1Q9NRD9 1551 aa23.41■■□□□ 1.34
VSX1-202ENST00000376709 GOLGA6L6A8MZA4 724 aa23.41■■□□□ 1.34
VSX1-202ENST00000376709 GRAPQ13588 217 aa23.41■■□□□ 1.34
VSX1-202ENST00000376709 TXNRD3Q86VQ6 643 aa23.41■■□□□ 1.34
VSX1-202ENST00000376709 GRAPLQ8TC17 118 aaPredicted RBP23.41■■□□□ 1.34
VSX1-202ENST00000376709 ANKIB1Q9P2G1 1089 aa23.41■■□□□ 1.34
VSX1-202ENST00000376709 CCDC88AQ3V6T2 1871 aa23.4■■□□□ 1.34
VSX1-202ENST00000376709 MARCKSP29966 332 aaPredicted RBP23.4■■□□□ 1.34
VSX1-202ENST00000376709 PRDX5P30044 214 aa23.4■■□□□ 1.34
VSX1-202ENST00000376709 GOLGA6L19H0YKK7 550 aa23.4■■□□□ 1.34
VSX1-202ENST00000376709 GUCY1A2P33402 732 aa23.4■■□□□ 1.34
VSX1-202ENST00000376709 SAFBQ15424 915 aaKnown RBP eCLIP23.4■■□□□ 1.34
VSX1-202ENST00000376709 C11orf57Q6ZUT1 292 aaPredicted RBP23.4■■□□□ 1.34
VSX1-202ENST00000376709 CMTR1Q8N1G2 835 aaKnown RBP23.4■■□□□ 1.34
VSX1-202ENST00000376709 JMYQ8N9B5 988 aa23.4■■□□□ 1.34
VSX1-202ENST00000376709 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.4■■□□□ 1.34
VSX1-202ENST00000376709 CRNKL1Q9BZJ0 848 aaKnown RBP23.4■■□□□ 1.34
VSX1-202ENST00000376709 PCP11498 1178 aaKnown RBP23.39■■□□□ 1.33
VSX1-202ENST00000376709 SEC23AQ15436 765 aa23.39■■□□□ 1.33
VSX1-202ENST00000376709 AXDND1Q5T1B0 1012 aaPredicted RBP23.39■■□□□ 1.33
VSX1-202ENST00000376709 CTR9Q6PD62 1173 aa23.39■■□□□ 1.33
VSX1-202ENST00000376709 ZSCAN10Q96SZ4 725 aaPredicted RBP23.39■■□□□ 1.33
VSX1-202ENST00000376709 TRIM5Q9C035 493 aa23.39■■□□□ 1.33
VSX1-202ENST00000376709 ANO10Q9NW15 660 aa23.39■■□□□ 1.33
VSX1-202ENST00000376709 JAG2Q9Y219 1238 aa23.39■■□□□ 1.33
VSX1-202ENST00000376709 USP17L12C9JPN9 530 aa23.38■■□□□ 1.33
VSX1-202ENST00000376709 USP17L21D6R901 530 aa23.38■■□□□ 1.33
VSX1-202ENST00000376709 PRDM1O75626 825 aa23.38■■□□□ 1.33
VSX1-202ENST00000376709 DEXIO95424 95 aa23.38■■□□□ 1.33
VSX1-202ENST00000376709 CMA1P23946 247 aa23.38■■□□□ 1.33
VSX1-202ENST00000376709 IQCA1Q86XH1 822 aa23.38■■□□□ 1.33
VSX1-202ENST00000376709 PROM2Q8N271 834 aa23.38■■□□□ 1.33
VSX1-202ENST00000376709 CRACR2BQ8N4Y2 399 aaPredicted RBP23.38■■□□□ 1.33
VSX1-202ENST00000376709 ERCC4Q92889 916 aaPredicted RBP23.38■■□□□ 1.33
VSX1-202ENST00000376709 MAST2Q6P0Q8 1798 aa23.38■■□□□ 1.33
VSX1-202ENST00000376709 SERPINB2P05120 415 aa23.38■■□□□ 1.33
VSX1-202ENST00000376709 ENAHQ8N8S7 591 aaPredicted RBP23.38■■□□□ 1.33
VSX1-202ENST00000376709 IRS2Q9Y4H2 1338 aa23.38■■□□□ 1.33
VSX1-202ENST00000376709 WDHD1O75717 1129 aaPredicted RBP23.37■■□□□ 1.33
VSX1-202ENST00000376709 MMP1P03956 469 aa23.37■■□□□ 1.33
VSX1-202ENST00000376709 TPM3P06753 285 aa23.37■■□□□ 1.33
VSX1-202ENST00000376709 ZRSR1Q15695 479 aaKnown RBP23.37■■□□□ 1.33
VSX1-202ENST00000376709 TXNRD1Q16881 649 aa23.37■■□□□ 1.33
VSX1-202ENST00000376709 IFIT1BQ5T764 474 aaKnown RBP23.37■■□□□ 1.33
VSX1-202ENST00000376709 NBPF11Q86T75 865 aa23.37■■□□□ 1.33
VSX1-202ENST00000376709 DZIP1Q86YF9 867 aaKnown RBP23.37■■□□□ 1.33
VSX1-202ENST00000376709 NOSTRINQ8IVI9 506 aa23.37■■□□□ 1.33
VSX1-202ENST00000376709 PPP6R2O75170 966 aa23.37■■□□□ 1.33
VSX1-202ENST00000376709 ZNF202O95125 648 aa23.37■■□□□ 1.33
VSX1-202ENST00000376709 PFKFB1P16118 471 aa23.37■■□□□ 1.33
VSX1-202ENST00000376709 PPP2R5BQ15173 497 aa23.37■■□□□ 1.33
VSX1-202ENST00000376709 RPGRQ92834 1020 aaKnown RBP23.37■■□□□ 1.33
VSX1-202ENST00000376709 BECN2A8MW95 431 aa23.36■■□□□ 1.33
VSX1-202ENST00000376709 ST5P78524 1137 aa23.36■■□□□ 1.33
VSX1-202ENST00000376709 IQCB1Q15051 598 aa23.36■■□□□ 1.33
VSX1-202ENST00000376709 SPTY2D1Q68D10 685 aaPredicted RBP23.36■■□□□ 1.33
VSX1-202ENST00000376709 DIS3L2Q8IYB7 885 aaKnown RBP23.36■■□□□ 1.33
VSX1-202ENST00000376709 MAP3K14Q99558 947 aa23.36■■□□□ 1.33
VSX1-202ENST00000376709 DCP1AQ9NPI6 582 aaPredicted RBP23.36■■□□□ 1.33
VSX1-202ENST00000376709 KCNJ14Q9UNX9 436 aa23.36■■□□□ 1.33
VSX1-202ENST00000376709 MROH7-TTC4A0A0A0MT08 1334 aa23.36■■□□□ 1.33
VSX1-202ENST00000376709 MYH6P13533 1939 aa23.36■■□□□ 1.33
VSX1-202ENST00000376709 BTBD18B2RXH4 712 aa23.35■■□□□ 1.33
VSX1-202ENST00000376709 PTPAQ15257 358 aa23.35■■□□□ 1.33
VSX1-202ENST00000376709 CATIPQ7Z7H3 387 aa23.35■■□□□ 1.33
VSX1-202ENST00000376709 DRC7Q8IY82 874 aa23.35■■□□□ 1.33
VSX1-202ENST00000376709 CEP57L1Q8IYX8 460 aa23.35■■□□□ 1.33
VSX1-202ENST00000376709 ATP8A2Q9NTI2 1148 aa23.35■■□□□ 1.33
VSX1-202ENST00000376709 A0A087WWV3 80 aa23.35■■□□□ 1.33
VSX1-202ENST00000376709 AKAP17AQ02040 695 aaKnown RBP23.35■■□□□ 1.33
VSX1-202ENST00000376709 DDR1Q08345 913 aa23.35■■□□□ 1.33
VSX1-202ENST00000376709 TMED8Q6PL24 325 aaPredicted RBP23.35■■□□□ 1.33
VSX1-202ENST00000376709 NAT10Q9H0A0 1025 aaKnown RBP23.35■■□□□ 1.33
VSX1-202ENST00000376709 KIAA1468Q9P260 1216 aa23.35■■□□□ 1.33
VSX1-202ENST00000376709 LAMB1P07942 1786 aa23.34■■□□□ 1.33
VSX1-202ENST00000376709 FGRP09769 529 aa23.34■■□□□ 1.33
VSX1-202ENST00000376709 ZNF75DP51815 510 aa23.34■■□□□ 1.33
VSX1-202ENST00000376709 PLA2G4DQ86XP0 818 aa23.34■■□□□ 1.33
VSX1-202ENST00000376709 FBXW7Q969H0 707 aa23.34■■□□□ 1.33
VSX1-202ENST00000376709 LEMD3Q9Y2U8 911 aa23.34■■□□□ 1.33
VSX1-202ENST00000376709 SLC3A2P08195 630 aaKnown RBP23.34■■□□□ 1.33
VSX1-202ENST00000376709 PIBF1Q8WXW3 757 aa23.34■■□□□ 1.33
VSX1-202ENST00000376709 GPR101Q96P66 508 aaPredicted RBP23.34■■□□□ 1.33
VSX1-202ENST00000376709 R3HCC1Q9Y3T6 440 aaKnown RBP23.34■■□□□ 1.33
VSX1-202ENST00000376709 CRY2Q49AN0 593 aa23.33■■□□□ 1.33
VSX1-202ENST00000376709 RNF26Q9BY78 433 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms