RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SLC45A1Q9Y2W3 748 aa25.75■■□□□ 1.71
VSX1-201ENST00000376707 SLC34A2O95436 690 aa25.74■■□□□ 1.71
VSX1-201ENST00000376707 BCRP11274 1271 aa25.74■■□□□ 1.71
VSX1-201ENST00000376707 OSBPP22059 807 aa25.74■■□□□ 1.71
VSX1-201ENST00000376707 EAF2Q96CJ1 260 aaPredicted RBP25.74■■□□□ 1.71
VSX1-201ENST00000376707 RBBP6Q7Z6E9 1792 aaKnown RBP25.74■■□□□ 1.71
VSX1-201ENST00000376707 IGSF3O75054 1194 aa25.73■■□□□ 1.71
VSX1-201ENST00000376707 PPP4CP60510 307 aa25.73■■□□□ 1.71
VSX1-201ENST00000376707 RAET1EQ8TD07 263 aa25.73■■□□□ 1.71
VSX1-201ENST00000376707 DHX36Q9H2U1 1008 aaKnown RBP25.73■■□□□ 1.71
VSX1-201ENST00000376707 PIH1D3Q9NQM4 214 aaKnown RBP25.73■■□□□ 1.71
VSX1-201ENST00000376707 HERC5Q9UII4 1024 aaKnown RBP25.73■■□□□ 1.71
VSX1-201ENST00000376707 MAST2Q6P0Q8 1798 aa25.72■■□□□ 1.71
VSX1-201ENST00000376707 CENPFP49454 3210 aa25.72■■□□□ 1.71
VSX1-201ENST00000376707 MYPNQ86TC9 1320 aa25.72■■□□□ 1.71
VSX1-201ENST00000376707 MS4A1P11836 297 aa25.72■■□□□ 1.71
VSX1-201ENST00000376707 FCGRTP55899 365 aa25.72■■□□□ 1.71
VSX1-201ENST00000376707 ADGRA1Q86SQ6 560 aa25.72■■□□□ 1.71
VSX1-201ENST00000376707 ERC1Q8IUD2 1116 aa25.72■■□□□ 1.71
VSX1-201ENST00000376707 SMCR8Q8TEV9 937 aaPredicted RBP25.72■■□□□ 1.71
VSX1-201ENST00000376707 TGFBRAP1Q8WUH2 860 aa25.72■■□□□ 1.71
VSX1-201ENST00000376707 PI4KBQ9UBF8 816 aa25.72■■□□□ 1.71
VSX1-201ENST00000376707 AGTPBP1Q9UPW5 1226 aa25.72■■□□□ 1.71
VSX1-201ENST00000376707 EXOC6BQ9Y2D4 811 aa25.72■■□□□ 1.71
VSX1-201ENST00000376707 CAP2P40123 477 aa25.71■■□□□ 1.71
VSX1-201ENST00000376707 MAPKAPK5Q8IW41 473 aa25.71■■□□□ 1.71
VSX1-201ENST00000376707 TBC1D2Q9BYX2 928 aa25.71■■□□□ 1.71
VSX1-201ENST00000376707 SPP2Q13103 211 aa25.7■■□□□ 1.7
VSX1-201ENST00000376707 ZNF280CQ8ND82 737 aa25.7■■□□□ 1.7
VSX1-201ENST00000376707 FLT1P17948 1338 aa25.69■■□□□ 1.7
VSX1-201ENST00000376707 IDH1O75874 414 aaKnown RBP25.69■■□□□ 1.7
VSX1-201ENST00000376707 CYP7A1P22680 504 aa25.69■■□□□ 1.7
VSX1-201ENST00000376707 GRK4P32298 578 aa25.69■■□□□ 1.7
VSX1-201ENST00000376707 TRIM34Q9BYJ4 488 aa25.69■■□□□ 1.7
VSX1-201ENST00000376707 PNMA3Q9UL41 463 aa25.69■■□□□ 1.7
VSX1-201ENST00000376707 KIAA0100Q14667 2235 aaKnown RBP25.68■■□□□ 1.7
VSX1-201ENST00000376707 USP17L5A8MUK1 530 aa25.68■■□□□ 1.7
VSX1-201ENST00000376707 PRKCZQ05513 592 aa25.68■■□□□ 1.7
VSX1-201ENST00000376707 RRP1BQ14684 758 aaKnown RBP25.68■■□□□ 1.7
VSX1-201ENST00000376707 HSP90AB4PQ58FF6 505 aa25.68■■□□□ 1.7
VSX1-201ENST00000376707 TREML2Q5T2D2 321 aa25.68■■□□□ 1.7
VSX1-201ENST00000376707 AACSQ86V21 672 aa25.68■■□□□ 1.7
VSX1-201ENST00000376707 PROCA1Q8NCQ7 364 aaPredicted RBP25.68■■□□□ 1.7
VSX1-201ENST00000376707 AS3MTQ9HBK9 375 aa25.68■■□□□ 1.7
VSX1-201ENST00000376707 PHIPQ8WWQ0 1821 aa25.67■■□□□ 1.7
VSX1-201ENST00000376707 CRACR2BQ8N4Y2 399 aaPredicted RBP25.67■■□□□ 1.7
VSX1-201ENST00000376707 HMGCS2P54868 508 aa25.66■■□□□ 1.7
VSX1-201ENST00000376707 DYNLL1P63167 89 aaKnown RBP25.66■■□□□ 1.7
VSX1-201ENST00000376707 FOXP4Q8IVH2 680 aaPredicted RBP25.66■■□□□ 1.7
VSX1-201ENST00000376707 BIN2Q9UBW5 565 aaPredicted RBP25.66■■□□□ 1.7
VSX1-201ENST00000376707 PALD1Q9ULE6 856 aa25.66■■□□□ 1.7
VSX1-201ENST00000376707 HLA-DOAP06340 250 aa25.65■■□□□ 1.7
VSX1-201ENST00000376707 PABPC4Q13310 644 aaKnown RBP eCLIP25.65■■□□□ 1.7
VSX1-201ENST00000376707 MTFR1Q15390 333 aa25.65■■□□□ 1.7
VSX1-201ENST00000376707 IL1RAPL2Q9NP60 686 aa25.65■■□□□ 1.7
VSX1-201ENST00000376707 SAP30BPQ9UHR5 308 aaKnown RBP25.65■■□□□ 1.7
VSX1-201ENST00000376707 NDUFB9Q9Y6M9 179 aa25.65■■□□□ 1.7
VSX1-201ENST00000376707 PTPRFP10586 1907 aa25.65■■□□□ 1.7
VSX1-201ENST00000376707 TNPO2O14787 897 aaKnown RBP25.64■■□□□ 1.7
VSX1-201ENST00000376707 ASNSP08243 561 aa25.64■■□□□ 1.7
VSX1-201ENST00000376707 MAP3K12Q12852 859 aa25.64■■□□□ 1.7
VSX1-201ENST00000376707 CERS3Q8IU89 383 aa25.64■■□□□ 1.7
VSX1-201ENST00000376707 ANKRD13CQ8N6S4 541 aa25.64■■□□□ 1.7
VSX1-201ENST00000376707 MAGEB6Q8N7X4 407 aa25.64■■□□□ 1.7
VSX1-201ENST00000376707 MIGA1Q8NAN2 632 aa25.64■■□□□ 1.7
VSX1-201ENST00000376707 RHPN1Q8TCX5 695 aa25.64■■□□□ 1.7
VSX1-201ENST00000376707 RCAN3Q9UKA8 241 aa25.64■■□□□ 1.7
VSX1-201ENST00000376707 GABRQQ9UN88 632 aa25.64■■□□□ 1.7
VSX1-201ENST00000376707 UBXN2AP68543 259 aa25.63■■□□□ 1.69
VSX1-201ENST00000376707 METTL16Q86W50 562 aaKnown RBP25.63■■□□□ 1.69
VSX1-201ENST00000376707 SLAIN1Q8ND83 568 aa25.63■■□□□ 1.69
VSX1-201ENST00000376707 ANTXR1Q9H6X2 564 aa25.63■■□□□ 1.69
VSX1-201ENST00000376707 DNAJC18Q9H819 358 aa25.63■■□□□ 1.69
VSX1-201ENST00000376707 DDX19BQ9UMR2 479 aa25.63■■□□□ 1.69
VSX1-201ENST00000376707 COG6Q9Y2V7 657 aa25.63■■□□□ 1.69
VSX1-201ENST00000376707 BRCA2P51587 3418 aa25.63■■□□□ 1.69
VSX1-201ENST00000376707 HMMRO75330 724 aa25.62■■□□□ 1.69
VSX1-201ENST00000376707 SH3D19Q5HYK7 790 aa25.62■■□□□ 1.69
VSX1-201ENST00000376707 RPAP2Q8IXW5 612 aaPredicted RBP25.62■■□□□ 1.69
VSX1-201ENST00000376707 WDR18Q9BV38 432 aa25.62■■□□□ 1.69
VSX1-201ENST00000376707 APBB1O00213 710 aa25.61■■□□□ 1.69
VSX1-201ENST00000376707 USP5P45974 858 aa25.61■■□□□ 1.69
VSX1-201ENST00000376707 FLT3LGP49771 235 aa25.61■■□□□ 1.69
VSX1-201ENST00000376707 MTMR2Q13614 643 aa25.61■■□□□ 1.69
VSX1-201ENST00000376707 FAM110CQ1W6H9 321 aa25.61■■□□□ 1.69
VSX1-201ENST00000376707 TMED8Q6PL24 325 aaPredicted RBP25.61■■□□□ 1.69
VSX1-201ENST00000376707 CLASRPQ8N2M8 674 aaKnown RBP25.61■■□□□ 1.69
VSX1-201ENST00000376707 GCC1Q96CN9 775 aa25.61■■□□□ 1.69
VSX1-201ENST00000376707 ATAD5Q96QE3 1844 aa25.6■■□□□ 1.69
VSX1-201ENST00000376707 ADCY3O60266 1144 aa25.6■■□□□ 1.69
VSX1-201ENST00000376707 GDF11O95390 407 aa25.6■■□□□ 1.69
VSX1-201ENST00000376707 CCL5P13501 91 aa25.6■■□□□ 1.69
VSX1-201ENST00000376707 GCLCP48506 637 aaPredicted RBP25.6■■□□□ 1.69
VSX1-201ENST00000376707 BACE1P56817 501 aa25.6■■□□□ 1.69
VSX1-201ENST00000376707 NKX2-3Q8TAU0 364 aa25.6■■□□□ 1.69
VSX1-201ENST00000376707 COA7Q96BR5 231 aa25.6■■□□□ 1.69
VSX1-201ENST00000376707 KIF1BPQ96EK5 621 aa25.6■■□□□ 1.69
VSX1-201ENST00000376707 GINM1Q9NU53 330 aa25.6■■□□□ 1.69
VSX1-201ENST00000376707 ZBTB40Q9NUA8 1239 aa25.6■■□□□ 1.69
VSX1-201ENST00000376707 TMOD4Q9NZQ9 345 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms