RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CYP2C8P10632 490 aa18.06■□□□□ 0.48
HDAC6-204ENST00000376643 TBC1D9Q6ZT07 1266 aa18.06■□□□□ 0.48
HDAC6-204ENST00000376643 ERC1Q8IUD2 1116 aa18.06■□□□□ 0.48
HDAC6-204ENST00000376643 BIN2Q9UBW5 565 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-204ENST00000376643 GCLCP48506 637 aaPredicted RBP18.05■□□□□ 0.48
HDAC6-204ENST00000376643 PI16Q6UXB8 463 aa18.05■□□□□ 0.48
HDAC6-204ENST00000376643 ZNF280CQ8ND82 737 aa18.05■□□□□ 0.48
HDAC6-204ENST00000376643 NOP58Q9Y2X3 529 aaKnown RBP18.05■□□□□ 0.48
HDAC6-204ENST00000376643 USP17L5A8MUK1 530 aa18.04■□□□□ 0.48
HDAC6-204ENST00000376643 TNPO2O14787 897 aaKnown RBP18.04■□□□□ 0.48
HDAC6-204ENST00000376643 CAP2P40123 477 aa18.04■□□□□ 0.48
HDAC6-204ENST00000376643 PPP4CP60510 307 aa18.04■□□□□ 0.48
HDAC6-204ENST00000376643 HSP90AB4PQ58FF6 505 aa18.04■□□□□ 0.48
HDAC6-204ENST00000376643 ZNF384Q8TF68 577 aa18.04■□□□□ 0.48
HDAC6-204ENST00000376643 COA7Q96BR5 231 aa18.04■□□□□ 0.48
HDAC6-204ENST00000376643 HLA-DOAP06340 250 aa18.03■□□□□ 0.48
HDAC6-204ENST00000376643 ASNSP08243 561 aa18.03■□□□□ 0.48
HDAC6-204ENST00000376643 FAM110CQ1W6H9 321 aa18.03■□□□□ 0.48
HDAC6-204ENST00000376643 FOXP4Q8IVH2 680 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-204ENST00000376643 CRACR2BQ8N4Y2 399 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-204ENST00000376643 PXYLP1Q8TE99 480 aa18.03■□□□□ 0.48
HDAC6-204ENST00000376643 DBNDD2Q9BQY9 259 aa18.03■□□□□ 0.48
HDAC6-204ENST00000376643 AATFQ9NY61 560 aaKnown RBP eCLIP18.03■□□□□ 0.48
HDAC6-204ENST00000376643 TNNQ9UQP3 1299 aa18.03■□□□□ 0.48
HDAC6-204ENST00000376643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-204ENST00000376643 MAST2Q6P0Q8 1798 aa18.03■□□□□ 0.48
HDAC6-204ENST00000376643 MYCP01106 439 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-204ENST00000376643 GJB1P08034 283 aa18.02■□□□□ 0.48
HDAC6-204ENST00000376643 PRKCZQ05513 592 aa18.02■□□□□ 0.48
HDAC6-204ENST00000376643 SPP2Q13103 211 aa18.02■□□□□ 0.48
HDAC6-204ENST00000376643 IRF5Q13568 498 aa18.02■□□□□ 0.48
HDAC6-204ENST00000376643 SH3RF3Q8TEJ3 882 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-204ENST00000376643 HTATIP2Q9BUP3 242 aa18.02■□□□□ 0.48
HDAC6-204ENST00000376643 CHMP4BQ9H444 224 aaKnown RBP18.02■□□□□ 0.48
HDAC6-204ENST00000376643 TMOD4Q9NZQ9 345 aa18.02■□□□□ 0.48
HDAC6-204ENST00000376643 ZBED9Q6R2W3 1325 aa18.01■□□□□ 0.47
HDAC6-204ENST00000376643 ZBTB7BO15156 539 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-204ENST00000376643 CTGFP29279 349 aa18.01■□□□□ 0.47
HDAC6-204ENST00000376643 GJA8P48165 433 aa18.01■□□□□ 0.47
HDAC6-204ENST00000376643 RNF208Q9H0X6 261 aa18.01■□□□□ 0.47
HDAC6-204ENST00000376643 SNRKQ9NRH2 765 aa18.01■□□□□ 0.47
HDAC6-204ENST00000376643 FLT1P17948 1338 aa18■□□□□ 0.47
HDAC6-204ENST00000376643 C19orf81C9J6K1 198 aa18■□□□□ 0.47
HDAC6-204ENST00000376643 ADCY3O60266 1144 aa18■□□□□ 0.47
HDAC6-204ENST00000376643 ECM2O94769 699 aaPredicted RBP18■□□□□ 0.47
HDAC6-204ENST00000376643 CYP2E1P05181 493 aaPredicted RBP18■□□□□ 0.47
HDAC6-204ENST00000376643 CCL5P13501 91 aa18■□□□□ 0.47
HDAC6-204ENST00000376643 SH3D19Q5HYK7 790 aa18■□□□□ 0.47
HDAC6-204ENST00000376643 GTF3C2Q8WUA4 911 aaPredicted RBP18■□□□□ 0.47
HDAC6-204ENST00000376643 TGFBRAP1Q8WUH2 860 aa18■□□□□ 0.47
HDAC6-204ENST00000376643 WDR18Q9BV38 432 aa18■□□□□ 0.47
HDAC6-204ENST00000376643 FLT3LGP49771 235 aa17.99■□□□□ 0.47
HDAC6-204ENST00000376643 IRX3P78415 501 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-204ENST00000376643 MAP3K12Q12852 859 aa17.99■□□□□ 0.47
HDAC6-204ENST00000376643 DIEXFQ68CQ4 756 aaKnown RBP17.99■□□□□ 0.47
HDAC6-204ENST00000376643 ANKRD13CQ8N6S4 541 aa17.99■□□□□ 0.47
HDAC6-204ENST00000376643 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
HDAC6-204ENST00000376643 DBNLQ9UJU6 430 aaKnown RBP17.99■□□□□ 0.47
HDAC6-204ENST00000376643 CENPFP49454 3210 aa17.98■□□□□ 0.47
HDAC6-204ENST00000376643 FAM196BA6NMK8 535 aa17.98■□□□□ 0.47
HDAC6-204ENST00000376643 HMMRO75330 724 aa17.98■□□□□ 0.47
HDAC6-204ENST00000376643 IDH1O75874 414 aaKnown RBP17.98■□□□□ 0.47
HDAC6-204ENST00000376643 ZAP70P43403 619 aa17.98■□□□□ 0.47
HDAC6-204ENST00000376643 HMGCS2P54868 508 aa17.98■□□□□ 0.47
HDAC6-204ENST00000376643 TTF1Q15361 905 aaPredicted RBP17.98■□□□□ 0.47
HDAC6-204ENST00000376643 MTFR1Q15390 333 aa17.98■□□□□ 0.47
HDAC6-204ENST00000376643 HABP4Q5JVS0 413 aaKnown RBP17.98■□□□□ 0.47
HDAC6-204ENST00000376643 METTL16Q86W50 562 aaKnown RBP17.98■□□□□ 0.47
HDAC6-204ENST00000376643 MAPKAPK5Q8IW41 473 aa17.98■□□□□ 0.47
HDAC6-204ENST00000376643 PTPRFP10586 1907 aa17.98■□□□□ 0.47
HDAC6-204ENST00000376643 ZSWIM8A7E2V4 1837 aa17.98■□□□□ 0.47
HDAC6-204ENST00000376643 CYP7A1P22680 504 aa17.97■□□□□ 0.47
HDAC6-204ENST00000376643 BACE1P56817 501 aa17.97■□□□□ 0.47
HDAC6-204ENST00000376643 TREML2Q5T2D2 321 aa17.97■□□□□ 0.47
HDAC6-204ENST00000376643 CEP85Q6P2H3 762 aa17.97■□□□□ 0.47
HDAC6-204ENST00000376643 PHIPQ8WWQ0 1821 aa17.97■□□□□ 0.47
HDAC6-204ENST00000376643 USP5P45974 858 aa17.96■□□□□ 0.47
HDAC6-204ENST00000376643 TTC6Q86TZ1 520 aa17.96■□□□□ 0.47
HDAC6-204ENST00000376643 MIER1Q8N108 512 aa17.96■□□□□ 0.47
HDAC6-204ENST00000376643 U2AF1L4Q8WU68 220 aaKnown RBP17.96■□□□□ 0.47
HDAC6-204ENST00000376643 CCDC8Q9H0W5 538 aaPredicted RBP17.96■□□□□ 0.47
HDAC6-204ENST00000376643 GABRQQ9UN88 632 aa17.96■□□□□ 0.47
HDAC6-204ENST00000376643 LOC285556D6RIA3 1793 aa17.96■□□□□ 0.47
HDAC6-204ENST00000376643 MGAMO43451 1857 aa17.95■□□□□ 0.46
HDAC6-204ENST00000376643 USP17L10C9JJH3 530 aa17.95■□□□□ 0.46
HDAC6-204ENST00000376643 INHAP05111 366 aa17.95■□□□□ 0.46
HDAC6-204ENST00000376643 RLBP1P12271 317 aa17.95■□□□□ 0.46
HDAC6-204ENST00000376643 HOXA7P31268 230 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-204ENST00000376643 MTMR2Q13614 643 aa17.95■□□□□ 0.46
HDAC6-204ENST00000376643 CCDC84Q86UT8 332 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-204ENST00000376643 AACSQ86V21 672 aa17.95■□□□□ 0.46
HDAC6-204ENST00000376643 CLASRPQ8N2M8 674 aaKnown RBP17.95■□□□□ 0.46
HDAC6-204ENST00000376643 DPF3Q92784 378 aa17.95■□□□□ 0.46
HDAC6-204ENST00000376643 EAF2Q96CJ1 260 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-204ENST00000376643 ASCC2Q9H1I8 757 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-204ENST00000376643 EHD4Q9H223 541 aa17.95■□□□□ 0.46
HDAC6-204ENST00000376643 PIH1D3Q9NQM4 214 aaKnown RBP17.95■□□□□ 0.46
HDAC6-204ENST00000376643 NR2E3Q9Y5X4 410 aa17.95■□□□□ 0.46
HDAC6-204ENST00000376643 FARP2O94887 1054 aaPredicted RBP17.94■□□□□ 0.46
HDAC6-204ENST00000376643 SGPL1O95470 568 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms