RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 PICK1Q9NRD5 415 aa17.31■□□□□ 0.36
CLCN6-203ENST00000376490 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.31■□□□□ 0.36
CLCN6-203ENST00000376490 PI4KBQ9UBF8 816 aa17.31■□□□□ 0.36
CLCN6-203ENST00000376490 KCNH4Q9UQ05 1017 aa17.31■□□□□ 0.36
CLCN6-203ENST00000376490 ZHX2Q9Y6X8 837 aa17.31■□□□□ 0.36
CLCN6-203ENST00000376490 ZNF532Q9HCE3 1301 aa17.3■□□□□ 0.36
CLCN6-203ENST00000376490 BAZ2AQ9UIF9 1905 aaKnown RBP17.3■□□□□ 0.36
CLCN6-203ENST00000376490 TCRBV5S4A2TA0A5A2 114 aa17.3■□□□□ 0.36
CLCN6-203ENST00000376490 RRP1BQ14684 758 aaKnown RBP17.3■□□□□ 0.36
CLCN6-203ENST00000376490 TAF1CQ15572 869 aaPredicted RBP17.3■□□□□ 0.36
CLCN6-203ENST00000376490 SLFNL1Q499Z3 407 aa17.3■□□□□ 0.36
CLCN6-203ENST00000376490 TMED8Q6PL24 325 aaPredicted RBP17.3■□□□□ 0.36
CLCN6-203ENST00000376490 CTU1Q7Z7A3 348 aaKnown RBP17.3■□□□□ 0.36
CLCN6-203ENST00000376490 RIOK1Q9BRS2 568 aaKnown RBP17.3■□□□□ 0.36
CLCN6-203ENST00000376490 ECHDC1Q9NTX5 307 aa17.3■□□□□ 0.36
CLCN6-203ENST00000376490 MAGEB6P1A0A0J9YX57 407 aa17.29■□□□□ 0.36
CLCN6-203ENST00000376490 USP5P45974 858 aa17.29■□□□□ 0.36
CLCN6-203ENST00000376490 SLC4A8Q2Y0W8 1093 aa17.29■□□□□ 0.36
CLCN6-203ENST00000376490 CCDC84Q86UT8 332 aaPredicted RBP17.29■□□□□ 0.36
CLCN6-203ENST00000376490 FOXP4Q8IVH2 680 aaPredicted RBP17.29■□□□□ 0.36
CLCN6-203ENST00000376490 HERC5Q9UII4 1024 aaKnown RBP17.29■□□□□ 0.36
CLCN6-203ENST00000376490 AFG3L2Q9Y4W6 797 aa17.29■□□□□ 0.36
CLCN6-203ENST00000376490 NAV1Q8NEY1 1877 aa17.29■□□□□ 0.36
CLCN6-203ENST00000376490 CXCL11O14625 94 aa17.28■□□□□ 0.36
CLCN6-203ENST00000376490 CHGBP05060 677 aa17.28■□□□□ 0.36
CLCN6-203ENST00000376490 CAP2P40123 477 aa17.28■□□□□ 0.36
CLCN6-203ENST00000376490 MOGSQ13724 837 aa17.28■□□□□ 0.36
CLCN6-203ENST00000376490 TSHZ3Q63HK5 1081 aa17.28■□□□□ 0.36
CLCN6-203ENST00000376490 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
CLCN6-203ENST00000376490 ZFYVE28Q9HCC9 887 aa17.28■□□□□ 0.36
CLCN6-203ENST00000376490 SUPT16HQ9Y5B9 1047 aaKnown RBP17.28■□□□□ 0.36
CLCN6-203ENST00000376490 CCDC85CA6NKD9 419 aa17.27■□□□□ 0.36
CLCN6-203ENST00000376490 ADD2P35612 726 aa17.27■□□□□ 0.36
CLCN6-203ENST00000376490 METTL16Q86W50 562 aaKnown RBP17.27■□□□□ 0.36
CLCN6-203ENST00000376490 DNAJC18Q9H819 358 aa17.27■□□□□ 0.36
CLCN6-203ENST00000376490 MYH8P13535 1937 aa17.27■□□□□ 0.35
CLCN6-203ENST00000376490 ZSWIM8A7E2V4 1837 aa17.26■□□□□ 0.35
CLCN6-203ENST00000376490 PDHXO00330 501 aa17.26■□□□□ 0.35
CLCN6-203ENST00000376490 JAG1P78504 1218 aa17.26■□□□□ 0.35
CLCN6-203ENST00000376490 SP3Q02447 781 aa17.26■□□□□ 0.35
CLCN6-203ENST00000376490 ANKRD23Q86SG2 305 aa17.26■□□□□ 0.35
CLCN6-203ENST00000376490 LCORLQ8N3X6 602 aa17.26■□□□□ 0.35
CLCN6-203ENST00000376490 CRACR2BQ8N4Y2 399 aaPredicted RBP17.26■□□□□ 0.35
CLCN6-203ENST00000376490 CD99L2Q8TCZ2 262 aa17.26■□□□□ 0.35
CLCN6-203ENST00000376490 OTUD7AQ8TE49 926 aaPredicted RBP17.26■□□□□ 0.35
CLCN6-203ENST00000376490 ZCCHC17Q9NP64 241 aaKnown RBP17.26■□□□□ 0.35
CLCN6-203ENST00000376490 A0A0G2JLL6 359 aaPredicted RBP17.25■□□□□ 0.35
CLCN6-203ENST00000376490 TRIM75PA6NK02 468 aa17.25■□□□□ 0.35
CLCN6-203ENST00000376490 HLA-DOAP06340 250 aa17.25■□□□□ 0.35
CLCN6-203ENST00000376490 ANKRD45Q5TZF3 282 aa17.25■□□□□ 0.35
CLCN6-203ENST00000376490 GPAT2Q6NUI2 795 aa17.25■□□□□ 0.35
CLCN6-203ENST00000376490 PRRT2Q7Z6L0 340 aaPredicted RBP17.25■□□□□ 0.35
CLCN6-203ENST00000376490 EXOC6Q8TAG9 804 aa17.25■□□□□ 0.35
CLCN6-203ENST00000376490 GPATCH3Q96I76 525 aa17.25■□□□□ 0.35
CLCN6-203ENST00000376490 TRIM34Q9BYJ4 488 aa17.25■□□□□ 0.35
CLCN6-203ENST00000376490 CRNKL1Q9BZJ0 848 aaKnown RBP17.25■□□□□ 0.35
CLCN6-203ENST00000376490 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.25■□□□□ 0.351e-6■■■■■ 31.5
CLCN6-203ENST00000376490 ARMT1Q9H993 441 aa17.25■□□□□ 0.35
CLCN6-203ENST00000376490 DDX60LQ5H9U9 1706 aaKnown RBP17.24■□□□□ 0.35
CLCN6-203ENST00000376490 TLR2O60603 784 aa17.24■□□□□ 0.35
CLCN6-203ENST00000376490 CAP1Q01518 475 aa17.24■□□□□ 0.35
CLCN6-203ENST00000376490 SPP2Q13103 211 aa17.24■□□□□ 0.35
CLCN6-203ENST00000376490 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
CLCN6-203ENST00000376490 PKN2Q16513 984 aaKnown RBP17.24■□□□□ 0.35
CLCN6-203ENST00000376490 SHROOM1Q2M3G4 852 aaPredicted RBP17.24■□□□□ 0.35
CLCN6-203ENST00000376490 GADL1Q6ZQY3 521 aa17.24■□□□□ 0.35
CLCN6-203ENST00000376490 SDR42E1Q8WUS8 393 aa17.24■□□□□ 0.35
CLCN6-203ENST00000376490 ERO1AQ96HE7 468 aa17.24■□□□□ 0.35
CLCN6-203ENST00000376490 MGAMO43451 1857 aa17.24■□□□□ 0.35
CLCN6-203ENST00000376490 USP17L5A8MUK1 530 aa17.23■□□□□ 0.35
CLCN6-203ENST00000376490 PRKAB2O43741 272 aa17.23■□□□□ 0.35
CLCN6-203ENST00000376490 GDF11O95390 407 aa17.23■□□□□ 0.35
CLCN6-203ENST00000376490 PLCD1P51178 756 aa17.23■□□□□ 0.35
CLCN6-203ENST00000376490 UBE3CQ15386 1083 aa17.23■□□□□ 0.35
CLCN6-203ENST00000376490 FASTKD5Q7L8L6 764 aaKnown RBP17.23■□□□□ 0.35
CLCN6-203ENST00000376490 TTC6Q86TZ1 520 aa17.23■□□□□ 0.35
CLCN6-203ENST00000376490 TRIM17Q9Y577 477 aa17.23■□□□□ 0.35
CLCN6-203ENST00000376490 MBD4O95243 580 aa17.22■□□□□ 0.35
CLCN6-203ENST00000376490 POLR3DP05423 398 aaPredicted RBP17.22■□□□□ 0.35
CLCN6-203ENST00000376490 EVX2Q03828 476 aa17.22■□□□□ 0.35
CLCN6-203ENST00000376490 AAMPQ13685 434 aa17.22■□□□□ 0.35
CLCN6-203ENST00000376490 ZSCAN25Q6NSZ9 544 aa17.22■□□□□ 0.35
CLCN6-203ENST00000376490 OTOP1Q7RTM1 612 aa17.22■□□□□ 0.35
CLCN6-203ENST00000376490 ZNF280CQ8ND82 737 aa17.22■□□□□ 0.35
CLCN6-203ENST00000376490 GCC1Q96CN9 775 aa17.22■□□□□ 0.35
CLCN6-203ENST00000376490 MCM9Q9NXL9 1143 aa17.22■□□□□ 0.35
CLCN6-203ENST00000376490 CPA4Q9UI42 421 aa17.22■□□□□ 0.35
CLCN6-203ENST00000376490 SERPINB13Q9UIV8 391 aa17.22■□□□□ 0.35
CLCN6-203ENST00000376490 TTC41PQ6P2S7 1318 aa17.21■□□□□ 0.35
CLCN6-203ENST00000376490 LOC285556D6RIA3 1793 aa17.21■□□□□ 0.35
CLCN6-203ENST00000376490 CYP2C8P10632 490 aa17.21■□□□□ 0.35
CLCN6-203ENST00000376490 TATDN1Q6P1N9 297 aa17.21■□□□□ 0.35
CLCN6-203ENST00000376490 C17orf99Q6UX52 265 aa17.21■□□□□ 0.35
CLCN6-203ENST00000376490 KBTBD3Q8NAB2 608 aa17.21■□□□□ 0.35
CLCN6-203ENST00000376490 PI4K2BQ8TCG2 481 aa17.21■□□□□ 0.35
CLCN6-203ENST00000376490 PUS7LQ9H0K6 701 aaKnown RBP17.21■□□□□ 0.35
CLCN6-203ENST00000376490 EHD4Q9H223 541 aa17.21■□□□□ 0.35
CLCN6-203ENST00000376490 DCP1AQ9NPI6 582 aaPredicted RBP17.21■□□□□ 0.35
CLCN6-203ENST00000376490 ZBTB47Q9UFB7 747 aaPredicted RBP17.21■□□□□ 0.35
CLCN6-203ENST00000376490 HPS5Q9UPZ3 1129 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms