RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 FANCBQ8NB91 859 aa21.81■■□□□ 1.08
PPP1R3F-202ENST00000376188 KIAA1468Q9P260 1216 aa21.81■■□□□ 1.08
PPP1R3F-202ENST00000376188 TNKSO95271 1327 aa21.81■■□□□ 1.08
PPP1R3F-202ENST00000376188 KIAA1551Q9HCM1 1747 aa21.81■■□□□ 1.08
PPP1R3F-202ENST00000376188 PFKFB1P16118 471 aa21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 PTPAQ15257 358 aa21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 SEC23AQ15436 765 aa21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 STK11IPQ8N1F8 1099 aa21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 NSUN4Q96CB9 384 aaKnown RBP21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 TIGD1Q96MW7 591 aa21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 MAP3K14Q99558 947 aa21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 MMP1P03956 469 aa21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 DRC7Q8IY82 874 aa21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 KCNF1Q9H3M0 494 aa21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 SPTLC3Q9NUV7 552 aa21.8■■□□□ 1.08
PPP1R3F-202ENST00000376188 WDHD1O75717 1129 aaPredicted RBP21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 DYNLL1P63167 89 aaKnown RBP21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 NBPF11Q86T75 865 aa21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 NOSTRINQ8IVI9 506 aa21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 CRACR2BQ8N4Y2 399 aaPredicted RBP21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 ZNF384Q8TF68 577 aa21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 ARHGEF1Q92888 912 aaKnown RBP21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 FGRP09769 529 aa21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 KLRK1P26718 216 aa21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 MARCKSP29966 332 aaPredicted RBP21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 NUP133Q8WUM0 1156 aa21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 TNRC6CQ9HCJ0 1690 aaKnown RBP21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 MROH7-TTC4A0A0A0MT08 1334 aa21.79■■□□□ 1.08
PPP1R3F-202ENST00000376188 SLC3A2P08195 630 aaKnown RBP21.78■■□□□ 1.08
PPP1R3F-202ENST00000376188 KIAA1524Q8TCG1 905 aa21.78■■□□□ 1.08
PPP1R3F-202ENST00000376188 FOXP1Q9H334 677 aaPredicted RBP21.78■■□□□ 1.08
PPP1R3F-202ENST00000376188 FAM237AA0A1B0GTK4 181 aa21.78■■□□□ 1.08
PPP1R3F-202ENST00000376188 DHX40Q8IX18 779 aaKnown RBP21.78■■□□□ 1.08
PPP1R3F-202ENST00000376188 MRFAP1L1Q96HT8 127 aa21.78■■□□□ 1.08
PPP1R3F-202ENST00000376188 ZSCAN10Q96SZ4 725 aaPredicted RBP21.78■■□□□ 1.08
PPP1R3F-202ENST00000376188 MECOMQ03112 1051 aa21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 IQCA1Q86XH1 822 aa21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 BPIFA3Q9BQP9 254 aa21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 RNF26Q9BY78 433 aaPredicted RBP21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 HPSEQ9Y251 543 aa21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 UBE2Q2LH0YL09 131 aa21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 CUTAO60888 179 aa21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 IGSF3O75054 1194 aa21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 PTGS1P23219 599 aa21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 GUCY1A2P33402 732 aa21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 SYKP43405 635 aa21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 RBM6P78332 1123 aaKnown RBP21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 DIS3L2Q8IYB7 885 aaKnown RBP21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 CRNKL1Q9BZJ0 848 aaKnown RBP21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 TAOK2Q9UL54 1235 aa21.77■■□□□ 1.08
PPP1R3F-202ENST00000376188 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 NPHP1O15259 732 aa21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 TM4SF1P30408 202 aa21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 ENAHQ8N8S7 591 aaPredicted RBP21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 TFCP2L1Q9NZI6 479 aa21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 CLIP2Q9UDT6 1046 aa21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 RFC4P35249 363 aa21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 RILPL1Q5EBL4 403 aa21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 DNTTIP2Q5QJE6 756 aaKnown RBP21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 CTR9Q6PD62 1173 aa21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 CCDC186Q7Z3E2 898 aa21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 ERCC4Q92889 916 aaPredicted RBP21.76■■□□□ 1.07
PPP1R3F-202ENST00000376188 BTBD18B2RXH4 712 aa21.75■■□□□ 1.07
PPP1R3F-202ENST00000376188 IFIT1BQ5T764 474 aaKnown RBP21.75■■□□□ 1.07
PPP1R3F-202ENST00000376188 RESP18Q5W5W9 173 aa21.75■■□□□ 1.07
PPP1R3F-202ENST00000376188 CATIPQ7Z7H3 387 aa21.75■■□□□ 1.07
PPP1R3F-202ENST00000376188 ATP8A2Q9NTI2 1148 aa21.75■■□□□ 1.07
PPP1R3F-202ENST00000376188 CALM1P0DP23 149 aa21.75■■□□□ 1.07
PPP1R3F-202ENST00000376188 CALM2P0DP24 149 aa21.75■■□□□ 1.07
PPP1R3F-202ENST00000376188 CALM3P0DP25 149 aa21.75■■□□□ 1.07
PPP1R3F-202ENST00000376188 TRAPPC3LQ5T215 181 aa21.75■■□□□ 1.07
PPP1R3F-202ENST00000376188 SHC4Q6S5L8 630 aa21.75■■□□□ 1.07
PPP1R3F-202ENST00000376188 RBM28Q9NW13 759 aaKnown RBP21.75■■□□□ 1.07
PPP1R3F-202ENST00000376188 AKAP17AQ02040 695 aaKnown RBP21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 SPTY2D1Q68D10 685 aaPredicted RBP21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 CCDC24Q8N4L8 307 aa21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 AOPEPQ8N6M6 819 aa21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 USP17L12C9JPN9 530 aa21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 USP17L21D6R901 530 aa21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 ORC4O43929 436 aa21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 XBP1P17861 261 aa21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 NLRP12P59046 1061 aa21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 CHAF1AQ13111 956 aaPredicted RBP21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 AMIGO3Q86WK7 504 aa21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 AATFQ9NY61 560 aaKnown RBP eCLIP21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 ARPP21Q9UBL0 812 aaPredicted RBP21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 PYCARDQ9ULZ3 195 aa21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 KCNJ14Q9UNX9 436 aa21.74■■□□□ 1.07
PPP1R3F-202ENST00000376188 A0A087WWV3 80 aa21.73■■□□□ 1.07
PPP1R3F-202ENST00000376188 CYP2D7A0A087X1C5 515 aa21.73■■□□□ 1.07
PPP1R3F-202ENST00000376188 FAM182BQ5T319 152 aa21.73■■□□□ 1.07
PPP1R3F-202ENST00000376188 CCDC82Q8N4S0 544 aa21.73■■□□□ 1.07
PPP1R3F-202ENST00000376188 KRI1Q8N9T8 703 aaKnown RBP21.73■■□□□ 1.07
PPP1R3F-202ENST00000376188 DCP1AQ9NPI6 582 aaPredicted RBP21.73■■□□□ 1.07
PPP1R3F-202ENST00000376188 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.73■■□□□ 1.07
PPP1R3F-202ENST00000376188 IRS2Q9Y4H2 1338 aa21.73■■□□□ 1.07
PPP1R3F-202ENST00000376188 SMIM22K7EJ46 135 aa21.72■■□□□ 1.07
PPP1R3F-202ENST00000376188 PRDX5P30044 214 aa21.72■■□□□ 1.07
PPP1R3F-202ENST00000376188 DPCR1Q3MIW9 517 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms