RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 GOLGA8BA8MQT2 603 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 ZBTB43O43298 467 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 VIL1P09327 827 aaKnown RBP13.02□□□□□ -0.33
PDPN-202ENST00000376057 PTGER2P43116 358 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 NOVP48745 357 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 STK3Q13188 491 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 AOC3Q16853 763 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 DALRD3Q5D0E6 543 aaKnown RBP13.02□□□□□ -0.33
PDPN-202ENST00000376057 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.33
PDPN-202ENST00000376057 IQCA1Q86XH1 822 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 UBAC1Q9BSL1 405 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 IDI2Q9BXS1 227 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 DBNDD1Q9H9R9 158 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 PLIN4Q96Q06 1357 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 CCDC196A0A1B0GTZ2 297 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 CCDC69A6NI79 296 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 DGKHQ86XP1 1220 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 TGFBRAP1Q8WUH2 860 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 ZSCAN16Q9H4T2 348 aaPredicted RBP13.02□□□□□ -0.33
PDPN-202ENST00000376057 INCENPQ9NQS7 918 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 GPHNQ9NQX3 736 aaPredicted RBP13.02□□□□□ -0.33
PDPN-202ENST00000376057 SLC12A7Q9Y666 1083 aa13.02□□□□□ -0.33
PDPN-202ENST00000376057 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
PDPN-202ENST00000376057 PPIP5K2O43314 1243 aa13.01□□□□□ -0.33
PDPN-202ENST00000376057 DDAH1O94760 285 aa13.01□□□□□ -0.33
PDPN-202ENST00000376057 ZBTB7AO95365 584 aa13.01□□□□□ -0.33
PDPN-202ENST00000376057 METAP2P50579 478 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDPN-202ENST00000376057 CPLX2Q6PUV4 134 aaKnown RBP13.01□□□□□ -0.33
PDPN-202ENST00000376057 EHD4Q9H223 541 aa13.01□□□□□ -0.33
PDPN-202ENST00000376057 USP17L8P0C7I0 530 aa13.01□□□□□ -0.33
PDPN-202ENST00000376057 CRKP46108 304 aa13.01□□□□□ -0.33
PDPN-202ENST00000376057 NTRK3Q16288 839 aa13.01□□□□□ -0.33
PDPN-202ENST00000376057 ATL3Q6DD88 541 aa13.01□□□□□ -0.33
PDPN-202ENST00000376057 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
PDPN-202ENST00000376057 GMLQ99445 158 aa13.01□□□□□ -0.33
PDPN-202ENST00000376057 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
PDPN-202ENST00000376057 ADAMTSL1Q8N6G6 1762 aa13□□□□□ -0.33
PDPN-202ENST00000376057 TNKSO95271 1327 aa13□□□□□ -0.33
PDPN-202ENST00000376057 YDJCA8MPS7 323 aa13□□□□□ -0.33
PDPN-202ENST00000376057 WDHD1O75717 1129 aaPredicted RBP13□□□□□ -0.33
PDPN-202ENST00000376057 FDPSP14324 419 aaKnown RBP13□□□□□ -0.33
PDPN-202ENST00000376057 TTC6Q86TZ1 520 aa13□□□□□ -0.33
PDPN-202ENST00000376057 ENAHQ8N8S7 591 aaPredicted RBP13□□□□□ -0.33
PDPN-202ENST00000376057 MTMR14Q8NCE2 650 aa13□□□□□ -0.33
PDPN-202ENST00000376057 COL4A5P29400 1685 aa13□□□□□ -0.33
PDPN-202ENST00000376057 CYP2D7A0A087X1C5 515 aa13□□□□□ -0.33
PDPN-202ENST00000376057 IFNAR1P17181 557 aa13□□□□□ -0.33
PDPN-202ENST00000376057 GABPAQ06546 454 aa13□□□□□ -0.33
PDPN-202ENST00000376057 R3HDM1Q15032 1099 aaKnown RBP13□□□□□ -0.33
PDPN-202ENST00000376057 LMBRD1Q9NUN5 540 aa13□□□□□ -0.33
PDPN-202ENST00000376057 RBM28Q9NW13 759 aaKnown RBP13□□□□□ -0.33
PDPN-202ENST00000376057 SWAP70Q9UH65 585 aa13□□□□□ -0.33
PDPN-202ENST00000376057 GREB1LQ9C091 1923 aaPredicted RBP13□□□□□ -0.33
PDPN-202ENST00000376057 JAK2O60674 1132 aa12.99□□□□□ -0.33
PDPN-202ENST00000376057 CDC42EP5Q6NZY7 148 aa12.99□□□□□ -0.33
PDPN-202ENST00000376057 RSBN1LQ6PCB5 846 aaPredicted RBP12.99□□□□□ -0.33
PDPN-202ENST00000376057 FAM184AQ8NB25 1140 aa12.99□□□□□ -0.33
PDPN-202ENST00000376057 AGBL3Q8NEM8 1001 aa12.99□□□□□ -0.33
PDPN-202ENST00000376057 ZNRF3Q9ULT6 936 aa12.99□□□□□ -0.33
PDPN-202ENST00000376057 CYP2D6P10635 497 aa12.99□□□□□ -0.33
PDPN-202ENST00000376057 IARSP41252 1262 aaKnown RBP12.99□□□□□ -0.33
PDPN-202ENST00000376057 CCT2P78371 535 aaKnown RBP12.99□□□□□ -0.33
PDPN-202ENST00000376057 CSPP1Q1MSJ5 1256 aa12.99□□□□□ -0.33
PDPN-202ENST00000376057 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
PDPN-202ENST00000376057 METTL16Q86W50 562 aaKnown RBP12.99□□□□□ -0.33
PDPN-202ENST00000376057 DHX36Q9H2U1 1008 aaKnown RBP12.99□□□□□ -0.33
PDPN-202ENST00000376057 ATF5Q9Y2D1 282 aaPredicted RBP12.99□□□□□ -0.33
PDPN-202ENST00000376057 POLR3DP05423 398 aaPredicted RBP12.98□□□□□ -0.33
PDPN-202ENST00000376057 RRP12Q5JTH9 1297 aaKnown RBP12.98□□□□□ -0.33
PDPN-202ENST00000376057 MAPKAPK5Q8IW41 473 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 ZNF654Q8IZM8 581 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 WASF1Q92558 559 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 NCOA5Q9HCD5 579 aaKnown RBP12.98□□□□□ -0.33
PDPN-202ENST00000376057 KCNQ5Q9NR82 932 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 USP40Q9NVE5 1235 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 CPLX1O14810 134 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 TRAK2O60296 914 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 FMNL1O95466 1100 aaPredicted RBP12.98□□□□□ -0.33
PDPN-202ENST00000376057 KLHL40Q2TBA0 621 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 FANCBQ8NB91 859 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 OSBPL5Q9H0X9 879 aaPredicted RBP12.98□□□□□ -0.33
PDPN-202ENST00000376057 SENP2Q9HC62 589 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 ATRNL1Q5VV63 1379 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 GOLGA8AA7E2F4 631 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 RANBP6O60518 1105 aaKnown RBP12.98□□□□□ -0.33
PDPN-202ENST00000376057 ENTPD3O75355 529 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 RASA1P20936 1047 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 PLCD1P51178 756 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 PPP4R3BQ5MIZ7 849 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 IFIT1BQ5T764 474 aaKnown RBP12.98□□□□□ -0.33
PDPN-202ENST00000376057 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 NEDD1Q8NHV4 660 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 TOMM22Q9NS69 142 aa12.98□□□□□ -0.33
PDPN-202ENST00000376057 ELP1O95163 1332 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 SIPA1L1O43166 1804 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 CDC27P30260 824 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 CDK8P49336 464 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 TROAPQ12815 778 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms