RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 SHISA4Q96DD7 197 aa20.18■□□□□ 0.82
CLIC1-208ENST00000375784 MYH2Q9UKX2 1941 aa20.17■□□□□ 0.82
CLIC1-208ENST00000375784 TRIOBPQ9H2D6 2365 aa20.17■□□□□ 0.82
CLIC1-208ENST00000375784 IRF6O14896 467 aa20.17■□□□□ 0.82
CLIC1-208ENST00000375784 ATP5JP18859 108 aa20.17■□□□□ 0.82
CLIC1-208ENST00000375784 RHBDL3P58872 404 aa20.17■□□□□ 0.82
CLIC1-208ENST00000375784 PICALMQ13492 652 aa20.17■□□□□ 0.82
CLIC1-208ENST00000375784 MTFR1Q15390 333 aa20.17■□□□□ 0.82
CLIC1-208ENST00000375784 ANTXR1Q9H6X2 564 aa20.17■□□□□ 0.82
CLIC1-208ENST00000375784 NDUFB9Q9Y6M9 179 aa20.17■□□□□ 0.82
CLIC1-208ENST00000375784 CYP7A1P22680 504 aa20.16■□□□□ 0.82
CLIC1-208ENST00000375784 PPP4CP60510 307 aa20.16■□□□□ 0.82
CLIC1-208ENST00000375784 C17orf99Q6UX52 265 aa20.16■□□□□ 0.82
CLIC1-208ENST00000375784 MIGA2Q7L4E1 593 aa20.16■□□□□ 0.82
CLIC1-208ENST00000375784 ZKSCAN4Q969J2 545 aaPredicted RBP20.16■□□□□ 0.82
CLIC1-208ENST00000375784 GPATCH3Q96I76 525 aa20.16■□□□□ 0.82
CLIC1-208ENST00000375784 WRNIP1Q96S55 665 aa20.16■□□□□ 0.82
CLIC1-208ENST00000375784 DNAJC2Q99543 621 aaKnown RBP20.16■□□□□ 0.82
CLIC1-208ENST00000375784 ZNF341Q9BYN7 854 aa20.16■□□□□ 0.82
CLIC1-208ENST00000375784 AATFQ9NY61 560 aaKnown RBP eCLIP20.16■□□□□ 0.82
CLIC1-208ENST00000375784 ZBTB47Q9UFB7 747 aaPredicted RBP20.16■□□□□ 0.82
CLIC1-208ENST00000375784 SRRDQ9UH36 339 aa20.16■□□□□ 0.82
CLIC1-208ENST00000375784 CTGFP29279 349 aa20.15■□□□□ 0.82
CLIC1-208ENST00000375784 PPIL2Q13356 520 aa20.15■□□□□ 0.82
CLIC1-208ENST00000375784 CERS3Q8IU89 383 aa20.15■□□□□ 0.82
CLIC1-208ENST00000375784 ZFPM1Q8IX07 1006 aa20.15■□□□□ 0.82
CLIC1-208ENST00000375784 TEX11Q8IYF3 940 aa20.15■□□□□ 0.82
CLIC1-208ENST00000375784 NKX2-3Q8TAU0 364 aa20.15■□□□□ 0.82
CLIC1-208ENST00000375784 BOLA2Q9H3K6 86 aa20.15■□□□□ 0.82
CLIC1-208ENST00000375784 ZSWIM8A7E2V4 1837 aa20.15■□□□□ 0.82
CLIC1-208ENST00000375784 CEP290O15078 2479 aa20.15■□□□□ 0.82
CLIC1-208ENST00000375784 SZT2Q5T011 3432 aa20.15■□□□□ 0.82
CLIC1-208ENST00000375784 GOLIM4O00461 696 aa20.14■□□□□ 0.81
CLIC1-208ENST00000375784 ECM2O94769 699 aaPredicted RBP20.14■□□□□ 0.81
CLIC1-208ENST00000375784 PSMC4P43686 418 aa20.14■□□□□ 0.81
CLIC1-208ENST00000375784 HDAC1Q13547 482 aaPredicted RBP20.14■□□□□ 0.81
CLIC1-208ENST00000375784 UBE2Q1Q7Z7E8 422 aa20.14■□□□□ 0.81
CLIC1-208ENST00000375784 MAGEB6Q8N7X4 407 aa20.14■□□□□ 0.81
CLIC1-208ENST00000375784 SH3RF3Q8TEJ3 882 aaPredicted RBP20.14■□□□□ 0.81
CLIC1-208ENST00000375784 TRIM47Q96LD4 638 aa20.14■□□□□ 0.81
CLIC1-208ENST00000375784 DDX4Q9NQI0 724 aaKnown RBP20.14■□□□□ 0.81
CLIC1-208ENST00000375784 CPA4Q9UI42 421 aa20.14■□□□□ 0.81
CLIC1-208ENST00000375784 GJA8P48165 433 aa20.13■□□□□ 0.81
CLIC1-208ENST00000375784 PRO3102Q9H379 93 aa20.13■□□□□ 0.81
CLIC1-208ENST00000375784 ECHDC1Q9NTX5 307 aa20.13■□□□□ 0.81
CLIC1-208ENST00000375784 PAG1Q9NWQ8 432 aa20.13■□□□□ 0.81
CLIC1-208ENST00000375784 RFX7Q2KHR2 1363 aa20.12■□□□□ 0.81
CLIC1-208ENST00000375784 GJB1P08034 283 aa20.12■□□□□ 0.81
CLIC1-208ENST00000375784 OSBPP22059 807 aa20.12■□□□□ 0.81
CLIC1-208ENST00000375784 HOXD10P28358 340 aa20.12■□□□□ 0.81
CLIC1-208ENST00000375784 GRK4P32298 578 aa20.12■□□□□ 0.81
CLIC1-208ENST00000375784 PPATQ06203 517 aa20.12■□□□□ 0.81
CLIC1-208ENST00000375784 SLC9C2Q5TAH2 1124 aa20.12■□□□□ 0.81
CLIC1-208ENST00000375784 ADGRA1Q86SQ6 560 aa20.12■□□□□ 0.81
CLIC1-208ENST00000375784 RAET1EQ8TD07 263 aa20.12■□□□□ 0.81
CLIC1-208ENST00000375784 HAUS7Q99871 368 aa20.12■□□□□ 0.81
CLIC1-208ENST00000375784 HTATIP2Q9BUP3 242 aa20.12■□□□□ 0.81
CLIC1-208ENST00000375784 RWDD1Q9H446 243 aaPredicted RBP20.12■□□□□ 0.81
CLIC1-208ENST00000375784 DDTLA6NHG4 134 aaPredicted RBP20.11■□□□□ 0.81
CLIC1-208ENST00000375784 SH3BP5LQ7L8J4 393 aa20.11■□□□□ 0.81
CLIC1-208ENST00000375784 ANKRD23Q86SG2 305 aa20.11■□□□□ 0.81
CLIC1-208ENST00000375784 EXOC6Q8TAG9 804 aa20.11■□□□□ 0.81
CLIC1-208ENST00000375784 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.11■□□□□ 0.813e-6■□□□□ 10.3
CLIC1-208ENST00000375784 ZNF112Q9UJU3 913 aa20.11■□□□□ 0.81
CLIC1-208ENST00000375784 FMNL1O95466 1100 aaPredicted RBP20.1■□□□□ 0.81
CLIC1-208ENST00000375784 CCL5P13501 91 aa20.1■□□□□ 0.81
CLIC1-208ENST00000375784 MIGA1Q8NAN2 632 aa20.1■□□□□ 0.81
CLIC1-208ENST00000375784 TGFBRAP1Q8WUH2 860 aa20.1■□□□□ 0.81
CLIC1-208ENST00000375784 OSBPL5Q9H0X9 879 aaPredicted RBP20.1■□□□□ 0.81
CLIC1-208ENST00000375784 DHX36Q9H2U1 1008 aaKnown RBP20.1■□□□□ 0.81
CLIC1-208ENST00000375784 ADGRA2Q96PE1 1338 aa20.09■□□□□ 0.81
CLIC1-208ENST00000375784 PDHXO00330 501 aa20.09■□□□□ 0.81
CLIC1-208ENST00000375784 DLL1O00548 723 aa20.09■□□□□ 0.81
CLIC1-208ENST00000375784 DYNLL1P63167 89 aaKnown RBP20.09■□□□□ 0.81
CLIC1-208ENST00000375784 MAP3K10Q02779 954 aa20.09■□□□□ 0.81
CLIC1-208ENST00000375784 ANKRD45Q5TZF3 282 aa20.09■□□□□ 0.81
CLIC1-208ENST00000375784 SLC17A8Q8NDX2 589 aa20.09■□□□□ 0.81
CLIC1-208ENST00000375784 EDC3Q96F86 508 aaKnown RBP20.09■□□□□ 0.81
CLIC1-208ENST00000375784 RNF208Q9H0X6 261 aa20.09■□□□□ 0.81
CLIC1-208ENST00000375784 NR2E3Q9Y5X4 410 aa20.09■□□□□ 0.81
CLIC1-208ENST00000375784 ATRNL1Q5VV63 1379 aa20.08■□□□□ 0.81
CLIC1-208ENST00000375784 MYPNQ86TC9 1320 aa20.08■□□□□ 0.81
CLIC1-208ENST00000375784 AK9Q5TCS8 1911 aa20.08■□□□□ 0.81
CLIC1-208ENST00000375784 TBC1D12O60347 775 aa20.08■□□□□ 0.81
CLIC1-208ENST00000375784 PDE6AP16499 860 aa20.08■□□□□ 0.81
CLIC1-208ENST00000375784 INPP5BP32019 993 aa20.08■□□□□ 0.81
CLIC1-208ENST00000375784 MAPKAPK5Q8IW41 473 aa20.08■□□□□ 0.81
CLIC1-208ENST00000375784 BIN2Q9UBW5 565 aaPredicted RBP20.08■□□□□ 0.81
CLIC1-208ENST00000375784 KCNH4Q9UQ05 1017 aa20.08■□□□□ 0.81
CLIC1-208ENST00000375784 MAGEB6P1A0A0J9YX57 407 aa20.07■□□□□ 0.8
CLIC1-208ENST00000375784 ERC2O15083 957 aa20.07■□□□□ 0.8
CLIC1-208ENST00000375784 UBXN2AP68543 259 aa20.07■□□□□ 0.8
CLIC1-208ENST00000375784 ZSCAN25Q6NSZ9 544 aa20.07■□□□□ 0.8
CLIC1-208ENST00000375784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLIC1-208ENST00000375784 PI4KBQ9UBF8 816 aa20.07■□□□□ 0.8
CLIC1-208ENST00000375784 U3KPZ7 1027 aaPredicted RBP20.07■□□□□ 0.8
CLIC1-208ENST00000375784 TTC41PQ6P2S7 1318 aa20.06■□□□□ 0.8
CLIC1-208ENST00000375784 ZNF532Q9HCE3 1301 aa20.06■□□□□ 0.8
CLIC1-208ENST00000375784 COL2A1P02458 1487 aaPredicted RBP20.06■□□□□ 0.8
CLIC1-208ENST00000375784 CTNND1O60716 968 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms