RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 N4BP2L2Q92802 583 aaPredicted RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 LRGUKQ96M69 825 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 AP1S3Q96PC3 154 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 AGTPBP1Q9UPW5 1226 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 ZC3H12BQ5HYM0 836 aaKnown RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 HP1BP3Q5SSJ5 553 aaPredicted RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 TMTC4Q5T4D3 741 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 PIGUQ9H490 435 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 ZNF638Q14966 1978 aaKnown RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 IPO5O00410 1097 aaKnown RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 PSMC1P62191 440 aaKnown RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 HABP4Q5JVS0 413 aaKnown RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 CCDC149Q6ZUS6 474 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 MORC1Q86VD1 984 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 PASD1Q8IV76 773 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 GOLGA5Q8TBA6 731 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 TTC21AQ8NDW8 1320 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 TRPA1O75762 1119 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 CAVIN2O95810 425 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 IRX1P78414 480 aaPredicted RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 DSTYKQ6XUX3 929 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 NOSTRINQ8IVI9 506 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 NEK11Q8NG66 645 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 SNX29Q8TEQ0 813 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 CABS1Q96KC9 395 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 BRD8Q9H0E9 1235 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 SYCE1LA8MT33 242 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 S100A6P06703 90 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 TRIM27P14373 513 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 PHKA1P46020 1223 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 PLIN5Q00G26 463 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 GABPB1Q06547 395 aaPredicted RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 LARP1BQ659C4 914 aaKnown RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 ZNF428Q96B54 188 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 GDAP1L1Q96MZ0 367 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 LZTS1Q9Y250 596 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 LMNB1P20700 586 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 PSMA3P25788 255 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 GUCY1A3Q02108 690 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 BFSP1Q12934 665 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 CFAP221Q4G0U5 840 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 RILPQ96NA2 401 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 TRIM6Q9C030 488 aaPredicted RBP6.59□□□□□ -1.35
SCN2A-202ENST00000375427 CSRNP2Q9H175 543 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 ANO10Q9NW15 660 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 STK38LQ9Y2H1 464 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.59□□□□□ -1.35
SCN2A-202ENST00000375427 STMND1H3BQB6 276 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 TNFAIP2Q03169 654 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 LMBR1Q8WVP7 490 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 PHF21AQ96BD5 680 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 RBSNQ9H1K0 784 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 KLHL11Q9NVR0 708 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 CCDC7Q96M83 1385 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 MYH11P35749 1972 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 ADCY3O60266 1144 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 KRT14P02533 472 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 TCF3P15923 654 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 LAMC2Q13753 1193 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 EIF2S3LQ2VIR3 472 aaKnown RBP6.59□□□□□ -1.35
SCN2A-202ENST00000375427 TJAP1Q5JTD0 557 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 C1orf94Q6P1W5 598 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 CCDC13Q8IYE1 715 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 CCHCR1Q8TD31 782 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 PPWD1Q96BP3 646 aaKnown RBP6.59□□□□□ -1.35
SCN2A-202ENST00000375427 FHDC1Q9C0D6 1143 aaPredicted RBP6.59□□□□□ -1.35
SCN2A-202ENST00000375427 PDE6AP16499 860 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 BCAP31P51572 246 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 RMI1Q9H9A7 625 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 ATP2B1P20020 1258 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 DNAJC3Q13217 504 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 TUBA3CQ13748 450 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 ZC3H18Q86VM9 953 aaKnown RBP6.59□□□□□ -1.35
SCN2A-202ENST00000375427 ATP8B4Q8TF62 1192 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 TSC1Q92574 1164 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 FAM129BQ96TA1 746 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 A8MXQ7 604 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 ASAP2O43150 1006 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 SASH1O94885 1247 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 SERPINB2P05120 415 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 MYO1EQ12965 1108 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 TAF11Q15544 211 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 CCDC157Q569K6 752 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 PODNQ7Z5L7 613 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 CATSPER3Q86XQ3 398 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 OR9Q1Q8NGQ5 310 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 GATAD2BQ8WXI9 593 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 TMOD3Q9NYL9 352 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 PARP3Q9Y6F1 533 aa6.59□□□□□ -1.35
SCN2A-202ENST00000375427 KRT1P04264 644 aa6.59□□□□□ -1.36
SCN2A-202ENST00000375427 ABRQ12979 859 aa6.59□□□□□ -1.36
SCN2A-202ENST00000375427 C9orf78Q9NZ63 289 aaPredicted RBP6.59□□□□□ -1.36
SCN2A-202ENST00000375427 STXBP3O00186 592 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 KDM4AO75164 1064 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 CYTH1Q15438 398 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 CHERPQ8IWX8 916 aaKnown RBP6.58□□□□□ -1.36
SCN2A-202ENST00000375427 CASP10Q92851 521 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 TRAIPQ9BWF2 469 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 PAPOLBQ9NRJ5 636 aaKnown RBP6.58□□□□□ -1.36
SCN2A-202ENST00000375427 SYBUQ9NX95 663 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms