RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 SPTLC3Q9NUV7 552 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 HSPA6P17066 643 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 POSTNQ15063 836 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 TOM1L2Q6ZVM7 507 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 UBLCP1Q8WVY7 318 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-204ENST00000375290 B4DLN1 442 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 CALUO43852 315 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-204ENST00000375290 MRPL12P52815 198 aaKnown RBP11.35□□□□□ -0.59
PTCH1-204ENST00000375290 SARM1Q6SZW1 724 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 LDHAL6AQ6ZMR3 332 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 NT5C3AQ9H0P0 336 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 PABPN1LA6NDY0 278 aaKnown RBP11.35□□□□□ -0.59
PTCH1-204ENST00000375290 SELENOSQ9BQE4 189 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 WDR7Q9Y4E6 1490 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 MACROD2A1Z1Q3 448 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 EPB41P11171 864 aaKnown RBP11.35□□□□□ -0.59
PTCH1-204ENST00000375290 BCRP11274 1271 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 NOC4LQ9BVI4 516 aaKnown RBP11.35□□□□□ -0.59
PTCH1-204ENST00000375290 I3L4J1 428 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 DNAJC8O75937 253 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-204ENST00000375290 STMN1P16949 149 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 ZNF131P52739 623 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 TBC1D8BQ0IIM8 1120 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 SEPT14Q6ZU15 432 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 LRRD1A4D1F6 860 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 NMIQ13287 307 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-204ENST00000375290 TRERF1Q96PN7 1200 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 HYOU1Q9Y4L1 999 aa11.35□□□□□ -0.59
PTCH1-204ENST00000375290 DRP2Q13474 957 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 RRP36Q96EU6 259 aaKnown RBP11.34□□□□□ -0.59
PTCH1-204ENST00000375290 MAGEA9P43362 315 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 EMBQ6PCB8 327 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 SRGAP1Q7Z6B7 1085 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 H7C1D1 291 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 GSTA5Q7RTV2 222 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 FAM81BQ96LP2 452 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 IWS1Q96ST2 819 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 MYO5CQ9NQX4 1742 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 UBE3BQ7Z3V4 1068 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 SLC17A8Q8NDX2 589 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 PRDM15P57071 1507 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-204ENST00000375290 ABCD1P33897 745 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 PHBP35232 272 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 ATP2B3Q16720 1220 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 OR8K1Q8NGG5 319 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 WHAMMQ8TF30 809 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 BICD1Q96G01 975 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 MYOM2P54296 1465 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 F6X3S4 739 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 SART1O43290 800 aaKnown RBP11.34□□□□□ -0.59
PTCH1-204ENST00000375290 EEF1GP26641 437 aaKnown RBP11.34□□□□□ -0.59
PTCH1-204ENST00000375290 CDC23Q9UJX2 597 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 TROVE2P10155 538 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTCH1-204ENST00000375290 MMRN2Q9H8L6 949 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 PUF60Q9UHX1 559 aaKnown RBP11.34□□□□□ -0.59
PTCH1-204ENST00000375290 LMNAP02545 664 aaKnown RBP11.34□□□□□ -0.59
PTCH1-204ENST00000375290 LMNB2Q03252 620 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 VSIG1Q86XK7 387 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
PTCH1-204ENST00000375290 POLR3EQ9NVU0 708 aa11.34□□□□□ -0.59
PTCH1-204ENST00000375290 SBNO1A3KN83 1393 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 DKC1O60832 514 aaKnown RBP eCLIP11.33□□□□□ -0.6
PTCH1-204ENST00000375290 CMA1P23946 247 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 TRAPPC10P48553 1259 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 GUCY1B3Q02153 619 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 TRMT2AQ8IZ69 625 aaKnown RBP11.33□□□□□ -0.6
PTCH1-204ENST00000375290 IFT81Q8WYA0 676 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 BPIFA3Q9BQP9 254 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 GSDMAQ96QA5 445 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 SSX2IPQ9Y2D8 614 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 LCMT1Q9UIC8 334 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 SOS2Q07890 1332 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-204ENST00000375290 CCDC160A6NGH7 325 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 TSC1Q92574 1164 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 IFIH1Q9BYX4 1025 aaKnown RBP11.33□□□□□ -0.6
PTCH1-204ENST00000375290 KDM3AQ9Y4C1 1321 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 THAP12O43422 761 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 TSPY3P0CV98 308 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 TSPY8P0CW00 308 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 CARD6Q9BX69 1037 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 LIN9Q5TKA1 542 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 ANTXR1Q9H6X2 564 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 TMEM63CQ9P1W3 806 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 EMILIN1Q9Y6C2 1016 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 FAM69CQ0P6D2 419 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 ANKRD20A3Q5VUR7 823 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 GBP5Q96PP8 586 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 NFE2L3Q9Y4A8 694 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 PBRM1Q86U86 1689 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 ATP5HO75947 161 aa11.33□□□□□ -0.6
PTCH1-204ENST00000375290 MMS22LQ6ZRQ5 1243 aa11.32□□□□□ -0.6
PTCH1-204ENST00000375290 TRIM42Q8IWZ5 723 aa11.32□□□□□ -0.6
PTCH1-204ENST00000375290 CRACR2BQ8N4Y2 399 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-204ENST00000375290 CEP120Q8N960 986 aa11.32□□□□□ -0.6
PTCH1-204ENST00000375290 PHACTR2O75167 634 aa11.32□□□□□ -0.6
PTCH1-204ENST00000375290 AFMP43652 599 aa11.32□□□□□ -0.6
PTCH1-204ENST00000375290 CCDC170Q8IYT3 715 aa11.32□□□□□ -0.6
PTCH1-204ENST00000375290 PRDM11Q9NQV5 511 aa11.32□□□□□ -0.6
PTCH1-204ENST00000375290 SAMD9LQ8IVG5 1584 aa11.32□□□□□ -0.6
PTCH1-204ENST00000375290 SEMA3EO15041 775 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms