RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 C9orf50Q5SZB4 431 aa11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 ZFPM1Q8IX07 1006 aa11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 ZNF280CQ8ND82 737 aa11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 IL27Q8NEV9 243 aa11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 GPRC5AQ8NFJ5 357 aa11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 PHIPQ8WWQ0 1821 aa11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 ATRNL1Q5VV63 1379 aa11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 DNM1LO00429 736 aa11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 TBC1D12O60347 775 aa11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 LDHBP07195 334 aaKnown RBP11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 RGS3P49796 1198 aa11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 RTP1P59025 263 aa11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 MRPS5P82675 430 aaKnown RBP11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 DIXDC1Q155Q3 683 aa11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 BEND3Q5T5X7 828 aa11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 ADAMTS19Q8TE59 1207 aa11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 LPAR1Q92633 364 aa11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 UHRF1Q96T88 793 aaPredicted RBP11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 HCN4Q9Y3Q4 1203 aa11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 PLXNB2O15031 1838 aa11.78□□□□□ -0.52
HLA-DOA-202ENST00000374813 HMGCS2P54868 508 aa11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 IRX3P78415 501 aaPredicted RBP11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 MFSD14CQ5VZR4 134 aa11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 USP38Q8NB14 1042 aa11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 ARRDC4Q8NCT1 418 aa11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 USP6NLQ92738 828 aa11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 BADQ92934 168 aa11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 OSBPL5Q9H0X9 879 aaPredicted RBP11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 THEGQ9P2T0 379 aa11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 ATP11BQ9Y2G3 1177 aa11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 MYBBP1AQ9BQG0 1328 aaKnown RBP11.77□□□□□ -0.53
HLA-DOA-202ENST00000374813 DOCK1Q14185 1865 aa11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 PUM3Q15397 648 aaKnown RBP11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 SH3D19Q5HYK7 790 aa11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 SLC39A5Q6ZMH5 540 aa11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 GTF3C2Q8WUA4 911 aaPredicted RBP11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 GAS2L1Q99501 681 aaPredicted RBP11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 APBA2Q99767 749 aa11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 AS3MTQ9HBK9 375 aa11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 PRDM5Q9NQX1 630 aaPredicted RBP11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 MAST2Q6P0Q8 1798 aa11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 LTBP2Q14767 1821 aa11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 DOCK2Q92608 1830 aa11.76□□□□□ -0.53
HLA-DOA-202ENST00000374813 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 DDTLA6NHG4 134 aaPredicted RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 GLRX3O76003 335 aaKnown RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 HOXA7P31268 230 aaPredicted RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 MORN1Q5T089 497 aa11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 AKNAD1Q5T1N1 836 aa11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 SH3BP5LQ7L8J4 393 aa11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 PLEKHH3Q7Z736 793 aa11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 SLF2Q8IX21 1173 aa11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 VGLL2Q8N8G2 317 aa11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 TSR2Q969E8 191 aaKnown RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 EDC3Q96F86 508 aaKnown RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 RNPC3Q96LT9 517 aaKnown RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 P2RX7Q99572 595 aaKnown RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 ZNF576Q9H609 170 aa11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 CWC22Q9HCG8 908 aaKnown RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 GNL3LQ9NVN8 582 aaKnown RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 DDX20Q9UHI6 824 aaKnown RBP11.75□□□□□ -0.53
HLA-DOA-202ENST00000374813 MYH13Q9UKX3 1938 aa11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 USP17L5A8MUK1 530 aa11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 ALDH1L1O75891 902 aa11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 CNGA1P29973 690 aa11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 PRDX5P30044 214 aa11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 CCL14Q16627 93 aa11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 LRRC24Q50LG9 513 aa11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 GPR142Q7Z601 462 aa11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 CCDC84Q86UT8 332 aaPredicted RBP11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 ZGPATQ8N5A5 531 aaKnown RBP11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 TMOD4Q9NZQ9 345 aa11.74□□□□□ -0.53
HLA-DOA-202ENST00000374813 KBTBD13C9JR72 458 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 LOC285556D6RIA3 1793 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 F6X3S4 739 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 UTYO14607 1347 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 SLC5A1P13866 664 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 FGFR2P21802 821 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 DNAJB2P25686 324 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 HERVK_113P62684 666 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 ERVK-9P63128 1117 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 ERVK-24P63145 666 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 MAP2K5Q13163 448 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 C1orf53Q5VUE5 145 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 MUC6Q6W4X9 2439 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 PPM1EQ8WY54 764 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 LPIN2Q92539 896 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 TACC3Q9Y6A5 838 aa11.73□□□□□ -0.53
HLA-DOA-202ENST00000374813 RLFQ13129 1914 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 MYH2Q9UKX2 1941 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 SALL1Q9NSC2 1324 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 C19orf81C9J6K1 198 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 CAP2P40123 477 aa11.72□□□□□ -0.53
HLA-DOA-202ENST00000374813 BACE1P56817 501 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms