RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 FOXP1Q9H334 677 aaPredicted RBP20.6■□□□□ 0.89
PHF1-201ENST00000374512 DENND2AQ9ULE3 1009 aa20.6■□□□□ 0.89
PHF1-201ENST00000374512 PCDHA5Q9Y5H7 936 aa20.6■□□□□ 0.89
PHF1-201ENST00000374512 CHD4Q14839 1912 aa20.6■□□□□ 0.89
PHF1-201ENST00000374512 MAP3K12Q12852 859 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 KANK3Q6NY19 840 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 CREBRFQ8IUR6 639 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 TRIM22Q8IYM9 498 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 IFNL3Q8IZI9 196 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 TMTC2Q8N394 836 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 TRIML1Q8N9V2 468 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 MLKLQ8NB16 471 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 SPATA5Q8NB90 893 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 NAPBQ9H115 298 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 ZHX1Q9UKY1 873 aaPredicted RBP20.59■□□□□ 0.89
PHF1-201ENST00000374512 DOCK2Q92608 1830 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 IFIT3O14879 490 aaKnown RBP20.59■□□□□ 0.89
PHF1-201ENST00000374512 MMP1P03956 469 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 TPM1P09493 284 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 GNAT2P19087 354 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 BMS1Q14692 1282 aaKnown RBP20.59■□□□□ 0.89
PHF1-201ENST00000374512 SART3Q15020 963 aaKnown RBP20.59■□□□□ 0.89
PHF1-201ENST00000374512 ISM2Q6H9L7 571 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 HELBQ8NG08 1087 aaPredicted RBP20.59■□□□□ 0.89
PHF1-201ENST00000374512 CLIC6Q96NY7 704 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 SLC26A6Q9BXS9 759 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 ZSWIM5Q9P217 1185 aa20.59■□□□□ 0.89
PHF1-201ENST00000374512 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.59■□□□□ 0.89
PHF1-201ENST00000374512 V9GYY5 206 aaPredicted RBP20.59■□□□□ 0.89
PHF1-201ENST00000374512 CCDC196A0A1B0GTZ2 297 aa20.58■□□□□ 0.89
PHF1-201ENST00000374512 RXRAP19793 462 aa20.58■□□□□ 0.89
PHF1-201ENST00000374512 EIF5P55010 431 aaKnown RBP20.58■□□□□ 0.89
PHF1-201ENST00000374512 CT47A1Q5JQC4 288 aaPredicted RBP20.58■□□□□ 0.89
PHF1-201ENST00000374512 AKNAD1Q5T1N1 836 aa20.58■□□□□ 0.89
PHF1-201ENST00000374512 SENP2Q9HC62 589 aa20.58■□□□□ 0.89
PHF1-201ENST00000374512 FANCLQ9NW38 375 aa20.58■□□□□ 0.89
PHF1-201ENST00000374512 PTPREP23469 700 aa20.58■□□□□ 0.88
PHF1-201ENST00000374512 TRIM65Q6PJ69 517 aa20.58■□□□□ 0.88
PHF1-201ENST00000374512 FOXP4Q8IVH2 680 aaPredicted RBP20.58■□□□□ 0.88
PHF1-201ENST00000374512 DPF2Q92785 391 aa20.58■□□□□ 0.88
PHF1-201ENST00000374512 MPHOSPH8Q99549 860 aa20.58■□□□□ 0.88
PHF1-201ENST00000374512 CEP131Q9UPN4 1083 aa20.58■□□□□ 0.88
PHF1-201ENST00000374512 SLIT2O94813 1529 aa20.58■□□□□ 0.88
PHF1-201ENST00000374512 TBX2Q13207 712 aaPredicted RBP20.57■□□□□ 0.88
PHF1-201ENST00000374512 NKX2-3Q8TAU0 364 aa20.57■□□□□ 0.88
PHF1-201ENST00000374512 ENOX1Q8TC92 643 aaKnown RBP20.57■□□□□ 0.88
PHF1-201ENST00000374512 CCDC87Q9NVE4 849 aa20.57■□□□□ 0.88
PHF1-201ENST00000374512 ERCC6LQ2NKX8 1250 aa20.57■□□□□ 0.88
PHF1-201ENST00000374512 SUSD4Q5VX71 490 aa20.57■□□□□ 0.88
PHF1-201ENST00000374512 INTS5Q6P9B9 1019 aaKnown RBP20.57■□□□□ 0.88
PHF1-201ENST00000374512 MFSD6Q6ZSS7 791 aa20.57■□□□□ 0.88
PHF1-201ENST00000374512 REXO1L1PQ8IX06 675 aa20.57■□□□□ 0.88
PHF1-201ENST00000374512 NACAP1Q9BZK3 213 aa20.57■□□□□ 0.88
PHF1-201ENST00000374512 ARGLU1Q9NWB6 273 aaPredicted RBP20.57■□□□□ 0.88
PHF1-201ENST00000374512 DNAI1Q9UI46 699 aa20.57■□□□□ 0.88
PHF1-201ENST00000374512 STX10O60499 249 aa20.56■□□□□ 0.88
PHF1-201ENST00000374512 DEXIO95424 95 aa20.56■□□□□ 0.88
PHF1-201ENST00000374512 SARSP49591 514 aaKnown RBP20.56■□□□□ 0.88
PHF1-201ENST00000374512 POSTNQ15063 836 aa20.56■□□□□ 0.88
PHF1-201ENST00000374512 PPP2R5BQ15173 497 aa20.56■□□□□ 0.88
PHF1-201ENST00000374512 STK11IPQ8N1F8 1099 aa20.56■□□□□ 0.88
PHF1-201ENST00000374512 STAG1Q8WVM7 1258 aa20.56■□□□□ 0.88
PHF1-201ENST00000374512 RASGRF1Q13972 1273 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 TAF3Q5VWG9 929 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 MAGEB6Q8N7X4 407 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 CCDC34Q96HJ3 373 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 UTP14AQ9BVJ6 771 aaKnown RBP20.55■□□□□ 0.88
PHF1-201ENST00000374512 EPB41L4AQ9HCS5 686 aaPredicted RBP20.55■□□□□ 0.88
PHF1-201ENST00000374512 FBXO2Q9UK22 296 aaPredicted RBP20.55■□□□□ 0.88
PHF1-201ENST00000374512 CICQ96RK0 1608 aaPredicted RBP20.55■□□□□ 0.88
PHF1-201ENST00000374512 SPATA31A5Q5VU36 1347 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 PNPLA7Q6ZV29 1317 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 SPATA31A7Q8IWB4 1347 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 SLFN14P0C7P3 912 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 ZNF18P17022 549 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 ATP6V1AP38606 617 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 TERF2Q15554 542 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 RTN1Q16799 776 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 DIS3L2Q8IYB7 885 aaKnown RBP20.55■□□□□ 0.88
PHF1-201ENST00000374512 MARCH10Q8NA82 808 aaPredicted RBP20.55■□□□□ 0.88
PHF1-201ENST00000374512 UBXN4Q92575 508 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 RREB1Q92766 1687 aa20.55■□□□□ 0.88
PHF1-201ENST00000374512 EFCAB8A8MWE9 144 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 MBD4O95243 580 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 TOB1P50616 345 aaPredicted RBP20.54■□□□□ 0.88
PHF1-201ENST00000374512 ZNF771Q7L3S4 317 aaPredicted RBP20.54■□□□□ 0.88
PHF1-201ENST00000374512 TMEM139Q8IV31 216 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 RNF41Q9H4P4 317 aaPredicted RBP20.54■□□□□ 0.88
PHF1-201ENST00000374512 MAN1B1Q9UKM7 699 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 ERICH2A1L162 156 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 BTBD18B2RXH4 712 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 BMP6P22004 513 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 CRKLP46109 303 aaKnown RBP20.54■□□□□ 0.88
PHF1-201ENST00000374512 MORC3Q14149 939 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 PARP10Q53GL7 1025 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 SPECC1LQ69YQ0 1117 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 NUTM2AQ8IVF1 878 aaPredicted RBP20.54■□□□□ 0.88
PHF1-201ENST00000374512 SMARCE1Q969G3 411 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 ACSBG1Q96GR2 724 aa20.54■□□□□ 0.88
PHF1-201ENST00000374512 SRPRBQ9Y5M8 271 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms