RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 SYT1P21579 422 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 TMEM67Q5HYA8 995 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 CLEC17AQ6ZS10 378 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 NSUN7Q8NE18 718 aaKnown RBP18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 MTA3Q9BTC8 594 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 SPON1Q9HCB6 807 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 TOMM22Q9NS69 142 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 USP40Q9NVE5 1235 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 ZNRF3Q9ULT6 936 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 IFIT3O14879 490 aaKnown RBP18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 NBR1Q14596 966 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 RSBN1LQ6PCB5 846 aaPredicted RBP18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 RAB11FIP4Q86YS3 637 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 ESR2Q92731 530 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 SERPINA10Q9UK55 444 aa18.46■□□□□ 0.55
NIPAL3-204ENST00000374399 APOA5Q6Q788 366 aa18.45■□□□□ 0.54
NIPAL3-204ENST00000374399 SLC44A5Q8NCS7 719 aa18.45■□□□□ 0.54
NIPAL3-204ENST00000374399 LLPHQ9BRT6 129 aaKnown RBP18.45■□□□□ 0.54
NIPAL3-204ENST00000374399 UTRNP46939 3433 aa18.44■□□□□ 0.54
NIPAL3-204ENST00000374399 LTBP3Q9NS15 1303 aa18.44■□□□□ 0.54
NIPAL3-204ENST00000374399 GOLGA8BA8MQT2 603 aa18.44■□□□□ 0.54
NIPAL3-204ENST00000374399 NFIAQ12857 509 aa18.44■□□□□ 0.54
NIPAL3-204ENST00000374399 SIPA1L1O43166 1804 aa18.44■□□□□ 0.54
NIPAL3-204ENST00000374399 RANBP6O60518 1105 aaKnown RBP18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 CXCL9Q07325 125 aa18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 NIM1KQ8IY84 436 aa18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 ENAHQ8N8S7 591 aaPredicted RBP18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 FAM217BQ9NTX9 383 aaPredicted RBP18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 TNKSO95271 1327 aa18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 POLR3DP05423 398 aaPredicted RBP18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 RASSF7Q02833 373 aa18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 PDE4BQ07343 736 aa18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 FAM47AQ5JRC9 791 aa18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 CHAMP1Q96JM3 812 aa18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 ZSCAN10Q96SZ4 725 aaPredicted RBP18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 ANP32EQ9BTT0 268 aa18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 NAP1L2Q9ULW6 460 aaPredicted RBP18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 MTMR6Q9Y217 621 aa18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
NIPAL3-204ENST00000374399 SRCAPQ6ZRS2 3230 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 NID2Q14112 1375 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 MYO3BQ8WXR4 1341 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 STX6O43752 255 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 NMT2O60551 498 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 SLC3A2P08195 630 aaKnown RBP18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 FDPSP14324 419 aaKnown RBP18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 RXRAP19793 462 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 CDC27P30260 824 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 MCM4P33991 863 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 PICALMQ13492 652 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 FOXD4L5Q5VV16 416 aaPredicted RBP18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 C16orf86Q6ZW13 317 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 ZFPM1Q8IX07 1006 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 FOXD4L4Q8WXT5 416 aaPredicted RBP18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 PRMT6Q96LA8 375 aaPredicted RBP18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 MYL10Q9BUA6 226 aa18.42■□□□□ 0.54
NIPAL3-204ENST00000374399 PTPDC1A2A3K4 754 aa18.41■□□□□ 0.54
NIPAL3-204ENST00000374399 BAG4O95429 457 aaKnown RBP18.41■□□□□ 0.54
NIPAL3-204ENST00000374399 RASA1P20936 1047 aa18.41■□□□□ 0.54
NIPAL3-204ENST00000374399 CACNB3P54284 484 aa18.41■□□□□ 0.54
NIPAL3-204ENST00000374399 GABPAQ06546 454 aa18.41■□□□□ 0.54
NIPAL3-204ENST00000374399 WTAPQ15007 396 aa18.41■□□□□ 0.54
NIPAL3-204ENST00000374399 CFAP100Q494V2 611 aa18.41■□□□□ 0.54
NIPAL3-204ENST00000374399 IDI2Q9BXS1 227 aa18.41■□□□□ 0.54
NIPAL3-204ENST00000374399 FHDC1Q9C0D6 1143 aaPredicted RBP18.41■□□□□ 0.54
NIPAL3-204ENST00000374399 OSBPL5Q9H0X9 879 aaPredicted RBP18.41■□□□□ 0.54
NIPAL3-204ENST00000374399 FAM198AQ9UFP1 575 aa18.41■□□□□ 0.54
NIPAL3-204ENST00000374399 CDK8P49336 464 aa18.4■□□□□ 0.54
NIPAL3-204ENST00000374399 RCSD1Q6JBY9 416 aa18.4■□□□□ 0.54
NIPAL3-204ENST00000374399 DDX11Q96FC9 970 aa18.4■□□□□ 0.54
NIPAL3-204ENST00000374399 UBAC1Q9BSL1 405 aa18.4■□□□□ 0.54
NIPAL3-204ENST00000374399 IL17RBQ9NRM6 502 aa18.4■□□□□ 0.54
NIPAL3-204ENST00000374399 WDR33Q9C0J8 1336 aaKnown RBP18.4■□□□□ 0.54
NIPAL3-204ENST00000374399 PPFIA3O75145 1194 aa18.4■□□□□ 0.54
NIPAL3-204ENST00000374399 ADD1P35611 737 aaKnown RBP18.4■□□□□ 0.54
NIPAL3-204ENST00000374399 SART3Q15020 963 aaKnown RBP18.4■□□□□ 0.54
NIPAL3-204ENST00000374399 NTRK3Q16288 839 aa18.4■□□□□ 0.54
NIPAL3-204ENST00000374399 ZBTB43O43298 467 aa18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 ZSCAN22P10073 491 aaPredicted RBP18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 RBM5P52756 815 aaKnown RBP eCLIP18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 TFAP4Q01664 338 aa18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 LARP1BQ659C4 914 aaKnown RBP18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 NFXL1Q6ZNB6 911 aa18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 SH3BP5LQ7L8J4 393 aa18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 MICU3Q86XE3 530 aa18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 AMOTL1Q8IY63 956 aa18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 TMTC2Q8N394 836 aa18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 AGBL3Q8NEM8 1001 aa18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 TDRD3Q9H7E2 651 aaKnown RBP18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 SLC12A7Q9Y666 1083 aa18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 TCHHQ07283 1943 aa18.39■□□□□ 0.53
NIPAL3-204ENST00000374399 CCDC69A6NI79 296 aa18.38■□□□□ 0.53
NIPAL3-204ENST00000374399 NPM3O75607 178 aaKnown RBP18.38■□□□□ 0.53
NIPAL3-204ENST00000374399 SLURP2P0DP57 97 aa18.38■□□□□ 0.53
NIPAL3-204ENST00000374399 METAP2P50579 478 aaKnown RBP eCLIP18.38■□□□□ 0.53
NIPAL3-204ENST00000374399 CCDC144CPQ8IYA2 1237 aa18.38■□□□□ 0.53
NIPAL3-204ENST00000374399 ZNF654Q8IZM8 581 aa18.38■□□□□ 0.53
NIPAL3-204ENST00000374399 MYH8P13535 1937 aa18.38■□□□□ 0.53
NIPAL3-204ENST00000374399 ERICH2A1L162 156 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 SPDYE2BA6NHP3 402 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms