RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 POSTNQ15063 836 aa13.08□□□□□ -0.31
PTPN20-204ENST00000374346 PPP2R5BQ15173 497 aa13.08□□□□□ -0.31
PTPN20-204ENST00000374346 CCDC93Q567U6 631 aa13.08□□□□□ -0.31
PTPN20-204ENST00000374346 FBXO38Q6PIJ6 1188 aa13.08□□□□□ -0.31
PTPN20-204ENST00000374346 DIS3L2Q8IYB7 885 aaKnown RBP13.08□□□□□ -0.31
PTPN20-204ENST00000374346 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.31
PTPN20-204ENST00000374346 STAG1Q8WVM7 1258 aa13.08□□□□□ -0.31
PTPN20-204ENST00000374346 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.31
PTPN20-204ENST00000374346 TMX1Q9H3N1 280 aa13.08□□□□□ -0.31
PTPN20-204ENST00000374346 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.08□□□□□ -0.31
PTPN20-204ENST00000374346 TPM1P09493 284 aa13.08□□□□□ -0.32
PTPN20-204ENST00000374346 CYP19A1P11511 503 aaPredicted RBP13.08□□□□□ -0.32
PTPN20-204ENST00000374346 FGFR2P21802 821 aa13.08□□□□□ -0.32
PTPN20-204ENST00000374346 CTDSPL2Q05D32 466 aa13.08□□□□□ -0.32
PTPN20-204ENST00000374346 SMARCE1Q969G3 411 aa13.08□□□□□ -0.32
PTPN20-204ENST00000374346 UTP14AQ9BVJ6 771 aaKnown RBP13.08□□□□□ -0.32
PTPN20-204ENST00000374346 DNAI1Q9UI46 699 aa13.08□□□□□ -0.32
PTPN20-204ENST00000374346 TIAM2Q8IVF5 1701 aa13.08□□□□□ -0.32
PTPN20-204ENST00000374346 BTBD18B2RXH4 712 aa13.07□□□□□ -0.32
PTPN20-204ENST00000374346 PTPREP23469 700 aa13.07□□□□□ -0.32
PTPN20-204ENST00000374346 IL6STP40189 918 aaPredicted RBP13.07□□□□□ -0.32
PTPN20-204ENST00000374346 RRP12Q5JTH9 1297 aaKnown RBP13.07□□□□□ -0.32
PTPN20-204ENST00000374346 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
PTPN20-204ENST00000374346 MNS1Q8NEH6 495 aa13.07□□□□□ -0.32
PTPN20-204ENST00000374346 SLAIN2Q9P270 581 aa13.07□□□□□ -0.32
PTPN20-204ENST00000374346 PNPLA7Q6ZV29 1317 aa13.07□□□□□ -0.32
PTPN20-204ENST00000374346 XIRP1Q702N8 1843 aaKnown RBP13.07□□□□□ -0.32
PTPN20-204ENST00000374346 AKAP17AQ02040 695 aaKnown RBP13.07□□□□□ -0.32
PTPN20-204ENST00000374346 BMS1Q14692 1282 aaKnown RBP13.07□□□□□ -0.32
PTPN20-204ENST00000374346 NT5DC1Q5TFE4 455 aa13.07□□□□□ -0.32
PTPN20-204ENST00000374346 UBXN4Q92575 508 aa13.07□□□□□ -0.32
PTPN20-204ENST00000374346 UBAC1Q9BSL1 405 aa13.07□□□□□ -0.32
PTPN20-204ENST00000374346 ARMT1Q9H993 441 aa13.07□□□□□ -0.32
PTPN20-204ENST00000374346 EPB41L4AQ9HCS5 686 aaPredicted RBP13.07□□□□□ -0.32
PTPN20-204ENST00000374346 ZHX1Q9UKY1 873 aaPredicted RBP13.07□□□□□ -0.32
PTPN20-204ENST00000374346 SLC4A4Q9Y6R1 1079 aa13.07□□□□□ -0.32
PTPN20-204ENST00000374346 GSG1L2A8MUP6 293 aa13.06□□□□□ -0.32
PTPN20-204ENST00000374346 RASGRF1Q13972 1273 aa13.06□□□□□ -0.32
PTPN20-204ENST00000374346 CT47A1Q5JQC4 288 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-204ENST00000374346 ZNF771Q7L3S4 317 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-204ENST00000374346 NUTM2AQ8IVF1 878 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-204ENST00000374346 ENOX1Q8TC92 643 aaKnown RBP13.06□□□□□ -0.32
PTPN20-204ENST00000374346 DPF2Q92785 391 aa13.06□□□□□ -0.32
PTPN20-204ENST00000374346 BAG1Q99933 345 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-204ENST00000374346 LRP5O75197 1615 aa13.06□□□□□ -0.32
PTPN20-204ENST00000374346 POLR2DO15514 142 aaKnown RBP13.06□□□□□ -0.32
PTPN20-204ENST00000374346 STX10O60499 249 aa13.06□□□□□ -0.32
PTPN20-204ENST00000374346 MDM2Q00987 491 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-204ENST00000374346 ERCC6LQ2NKX8 1250 aa13.06□□□□□ -0.32
PTPN20-204ENST00000374346 SPECC1LQ69YQ0 1117 aa13.06□□□□□ -0.32
PTPN20-204ENST00000374346 STK11IPQ8N1F8 1099 aa13.06□□□□□ -0.32
PTPN20-204ENST00000374346 HELBQ8NG08 1087 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-204ENST00000374346 ZBTB1Q9Y2K1 713 aa13.06□□□□□ -0.32
PTPN20-204ENST00000374346 MYH6P13533 1939 aa13.06□□□□□ -0.32
PTPN20-204ENST00000374346 NPHP1O15259 732 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 FOXP4Q8IVH2 680 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-204ENST00000374346 ZNF34Q8IZ26 560 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 CRACR2BQ8N4Y2 399 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-204ENST00000374346 NKX2-3Q8TAU0 364 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 LRP2BPQ9P2M1 347 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 FBXO2Q9UK22 296 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-204ENST00000374346 MAN1B1Q9UKM7 699 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 NFE2L3Q9Y4A8 694 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 SRPRBQ9Y5M8 271 aaKnown RBP13.05□□□□□ -0.32
PTPN20-204ENST00000374346 BCL9O00512 1426 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 IGHMBP2P38935 993 aaKnown RBP13.05□□□□□ -0.32
PTPN20-204ENST00000374346 FAM193AP78312 1265 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 PDILTQ8N807 584 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 FANCBQ8NB91 859 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 INCENPQ9NQS7 918 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 KCNJ14Q9UNX9 436 aa13.05□□□□□ -0.32
PTPN20-204ENST00000374346 EFCAB8A8MWE9 144 aa13.04□□□□□ -0.32
PTPN20-204ENST00000374346 URI1O94763 535 aaPredicted RBP13.04□□□□□ -0.32
PTPN20-204ENST00000374346 H2AFXP16104 143 aaPredicted RBP13.04□□□□□ -0.32
PTPN20-204ENST00000374346 ERCC5P28715 1186 aaPredicted RBP13.04□□□□□ -0.32
PTPN20-204ENST00000374346 TOB1P50616 345 aaPredicted RBP13.04□□□□□ -0.32
PTPN20-204ENST00000374346 CCDC152Q4G0S7 254 aa13.04□□□□□ -0.32
PTPN20-204ENST00000374346 ARHGAP29Q52LW3 1261 aa13.04□□□□□ -0.32
PTPN20-204ENST00000374346 SPECC1Q5M775 1068 aa13.04□□□□□ -0.32
PTPN20-204ENST00000374346 ESR2Q92731 530 aa13.04□□□□□ -0.32
PTPN20-204ENST00000374346 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
PTPN20-204ENST00000374346 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.04□□□□□ -0.32
PTPN20-204ENST00000374346 BMP15O95972 392 aa13.04□□□□□ -0.32
PTPN20-204ENST00000374346 SARSP49591 514 aaKnown RBP13.04□□□□□ -0.32
PTPN20-204ENST00000374346 MORC3Q14149 939 aa13.04□□□□□ -0.32
PTPN20-204ENST00000374346 ZNF654Q8IZM8 581 aa13.04□□□□□ -0.32
PTPN20-204ENST00000374346 ZKSCAN3Q9BRR0 538 aa13.04□□□□□ -0.32
PTPN20-204ENST00000374346 RNF26Q9BY78 433 aaPredicted RBP13.04□□□□□ -0.32
PTPN20-204ENST00000374346 SERTAD1Q9UHV2 236 aa13.04□□□□□ -0.32
PTPN20-204ENST00000374346 CASQ1P31415 396 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 TRIM65Q6PJ69 517 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 REXO1L1PQ8IX06 675 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 SYTL4Q96C24 671 aaPredicted RBP13.03□□□□□ -0.32
PTPN20-204ENST00000374346 BRMS1Q9HCU9 246 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 BCORQ6W2J9 1755 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 TMEM232C9JQI7 657 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms