RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 TXKP42681 527 aa20.13■□□□□ 0.81
COL16A1-203ENST00000373672 TPD52P55327 224 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-203ENST00000373672 KRT25Q7Z3Z0 450 aa20.13■□□□□ 0.81
COL16A1-203ENST00000373672 IFT20Q8IY31 132 aa20.13■□□□□ 0.81
COL16A1-203ENST00000373672 IFT74Q96LB3 600 aa20.13■□□□□ 0.81
COL16A1-203ENST00000373672 FAM227BQ96M60 508 aa20.13■□□□□ 0.81
COL16A1-203ENST00000373672 B4GALNT4Q76KP1 1039 aa20.12■□□□□ 0.81
COL16A1-203ENST00000373672 VIMP08670 466 aaKnown RBP20.12■□□□□ 0.81
COL16A1-203ENST00000373672 POLD1P28340 1107 aa20.12■□□□□ 0.81
COL16A1-203ENST00000373672 UAP1Q16222 522 aaPredicted RBP20.12■□□□□ 0.81
COL16A1-203ENST00000373672 CLUL1Q15846 466 aa20.12■□□□□ 0.81
COL16A1-203ENST00000373672 TMTC1Q8IUR5 882 aa20.12■□□□□ 0.81
COL16A1-203ENST00000373672 PPFIBP2Q8ND30 876 aa20.12■□□□□ 0.81
COL16A1-203ENST00000373672 DKC1O60832 514 aaKnown RBP eCLIP20.12■□□□□ 0.81
COL16A1-203ENST00000373672 IL13P35225 146 aa20.12■□□□□ 0.81
COL16A1-203ENST00000373672 FYB2Q5VWT5 728 aa20.12■□□□□ 0.81
COL16A1-203ENST00000373672 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.12■□□□□ 0.819e-7■■■■□ 22.5
COL16A1-203ENST00000373672 HARSP12081 509 aaKnown RBP20.11■□□□□ 0.81
COL16A1-203ENST00000373672 U2AF2P26368 475 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL16A1-203ENST00000373672 ADCY7P51828 1080 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 SLC8A3P57103 927 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 STRN3Q13033 797 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 FCHSD1Q86WN1 690 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 SMC1BQ8NDV3 1235 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 ZBTB9Q96C00 473 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 E7EVH7 732 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 ZNF202O95125 648 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 KRT9P35527 623 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 NONOQ15233 471 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL16A1-203ENST00000373672 SLC9C1Q4G0N8 1177 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 KBTBD3Q8NAB2 608 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 TRAPPC8Q9Y2L5 1435 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 UBAP1LF5GYI3 381 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 EDC4Q6P2E9 1401 aaKnown RBP20.11■□□□□ 0.81
COL16A1-203ENST00000373672 KIFC2Q96AC6 838 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 ARHGEF35A5YM69 484 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 HPDP32754 393 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-203ENST00000373672 TAF12Q16514 161 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 ZNF365Q70YC5 407 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 LZTS2Q9BRK4 669 aa20.11■□□□□ 0.81
COL16A1-203ENST00000373672 ABCC10Q5T3U5 1492 aa20.1■□□□□ 0.81
COL16A1-203ENST00000373672 STMN2Q93045 179 aa20.1■□□□□ 0.81
COL16A1-203ENST00000373672 UHRF1BP1Q6BDS2 1440 aa20.1■□□□□ 0.81
COL16A1-203ENST00000373672 GIGYF1O75420 1035 aaPredicted RBP20.1■□□□□ 0.81
COL16A1-203ENST00000373672 CDCA7Q9BWT1 371 aaPredicted RBP20.1■□□□□ 0.81
COL16A1-203ENST00000373672 MAPK8IP1Q9UQF2 711 aa20.1■□□□□ 0.81
COL16A1-203ENST00000373672 NCAPH2Q6IBW4 605 aa20.1■□□□□ 0.81
COL16A1-203ENST00000373672 SHANK2Q9UPX8 1470 aa20.1■□□□□ 0.81
COL16A1-203ENST00000373672 A6NNZ2 444 aa20.1■□□□□ 0.81
COL16A1-203ENST00000373672 TRPC3Q13507 836 aa20.1■□□□□ 0.81
COL16A1-203ENST00000373672 TUBB8Q3ZCM7 444 aa20.1■□□□□ 0.81
COL16A1-203ENST00000373672 RSRC1Q96IZ7 334 aaKnown RBP20.1■□□□□ 0.81
COL16A1-203ENST00000373672 LRWD1Q9UFC0 647 aa20.1■□□□□ 0.81
COL16A1-203ENST00000373672 GGA1Q9UJY5 639 aa20.1■□□□□ 0.81
COL16A1-203ENST00000373672 ZNF445P59923 1031 aa20.09■□□□□ 0.81
COL16A1-203ENST00000373672 CROCCP2Q86T23 111 aa20.09■□□□□ 0.81
COL16A1-203ENST00000373672 CCDC117Q8IWD4 279 aaPredicted RBP20.09■□□□□ 0.81
COL16A1-203ENST00000373672 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.09■□□□□ 0.81
COL16A1-203ENST00000373672 POSTNQ15063 836 aa20.09■□□□□ 0.81
COL16A1-203ENST00000373672 WDR66Q8TBY9 1149 aa20.09■□□□□ 0.81
COL16A1-203ENST00000373672 LPIN2Q92539 896 aa20.09■□□□□ 0.81
COL16A1-203ENST00000373672 KLHDC4Q8TBB5 520 aa20.09■□□□□ 0.81
COL16A1-203ENST00000373672 SNX29Q8TEQ0 813 aa20.09■□□□□ 0.81
COL16A1-203ENST00000373672 IBTKQ9P2D0 1353 aaPredicted RBP20.09■□□□□ 0.81
COL16A1-203ENST00000373672 USP19O94966 1318 aa20.09■□□□□ 0.81
COL16A1-203ENST00000373672 ARHGAP6O43182 974 aa20.09■□□□□ 0.81
COL16A1-203ENST00000373672 GMNNO75496 209 aa20.09■□□□□ 0.81
COL16A1-203ENST00000373672 EIF6P56537 245 aaKnown RBP20.09■□□□□ 0.81
COL16A1-203ENST00000373672 SUCLG2Q96I99 432 aa20.09■□□□□ 0.81
COL16A1-203ENST00000373672 TMOD4Q9NZQ9 345 aa20.08■□□□□ 0.81
COL16A1-203ENST00000373672 NPC1L1Q9UHC9 1359 aa20.08■□□□□ 0.81
COL16A1-203ENST00000373672 CHL1O00533 1208 aa20.08■□□□□ 0.81
COL16A1-203ENST00000373672 CTDSPL2Q05D32 466 aa20.08■□□□□ 0.81
COL16A1-203ENST00000373672 KRT40Q6A162 431 aa20.08■□□□□ 0.81
COL16A1-203ENST00000373672 PPP1R21Q6ZMI0 780 aa20.08■□□□□ 0.81
COL16A1-203ENST00000373672 ZNF594Q96JF6 807 aaPredicted RBP20.08■□□□□ 0.81
COL16A1-203ENST00000373672 CARD6Q9BX69 1037 aa20.08■□□□□ 0.81
COL16A1-203ENST00000373672 TSKSQ9UJT2 592 aa20.08■□□□□ 0.81
COL16A1-203ENST00000373672 KRBA2Q6ZNG9 492 aa20.08■□□□□ 0.8
COL16A1-203ENST00000373672 PICK1Q9NRD5 415 aa20.08■□□□□ 0.8
COL16A1-203ENST00000373672 RASA3Q14644 834 aa20.08■□□□□ 0.8
COL16A1-203ENST00000373672 OTUD7BQ6GQQ9 843 aa20.08■□□□□ 0.8
COL16A1-203ENST00000373672 RIOK3O14730 519 aaKnown RBP20.07■□□□□ 0.8
COL16A1-203ENST00000373672 ATP11AP98196 1134 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 GOLGA6CA6NDK9 693 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 GOLGA6DP0CG33 693 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 GOLGA6AQ9NYA3 693 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 TAB2Q9NYJ8 693 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 FAM184BQ9ULE4 1060 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 MROH5Q6ZUA9 1318 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 SYCE1Q8N0S2 351 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 NELFBQ8WX92 580 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 SLC52A2Q9HAB3 445 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 AATFQ9NY61 560 aaKnown RBP eCLIP20.07■□□□□ 0.8
COL16A1-203ENST00000373672 PRDM1O75626 825 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 STK10O94804 968 aaKnown RBP20.07■□□□□ 0.8
COL16A1-203ENST00000373672 CCT6BQ92526 530 aa20.07■□□□□ 0.8
COL16A1-203ENST00000373672 MKRN1Q9UHC7 482 aaKnown RBP20.07■□□□□ 0.8
COL16A1-203ENST00000373672 RNASE9P60153 205 aaKnown RBP20.06■□□□□ 0.8
COL16A1-203ENST00000373672 FAM173BQ6P4H8 233 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms