RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 TRIM34Q9BYJ4 488 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 PICK1Q9NRD5 415 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 STAP2Q9UGK3 403 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 SAP30BPQ9UHR5 308 aaKnown RBP14.5□□□□□ -0.09
HDAC8-201ENST00000373554 HERC5Q9UII4 1024 aaKnown RBP14.5□□□□□ -0.09
HDAC8-201ENST00000373554 PALD1Q9ULE6 856 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 FAM196BA6NMK8 535 aa14.49□□□□□ -0.09
HDAC8-201ENST00000373554 PHF20L1A8MW92 1017 aa14.49□□□□□ -0.09
HDAC8-201ENST00000373554 TRPA1O75762 1119 aa14.49□□□□□ -0.09
HDAC8-201ENST00000373554 GTF2A2P52657 109 aa14.49□□□□□ -0.09
HDAC8-201ENST00000373554 LBX1P52954 281 aa14.49□□□□□ -0.09
HDAC8-201ENST00000373554 FSD1Q9BTV5 496 aa14.49□□□□□ -0.09
HDAC8-201ENST00000373554 ARMT1Q9H993 441 aa14.49□□□□□ -0.09
HDAC8-201ENST00000373554 RNF186Q9NXI6 227 aa14.49□□□□□ -0.09
HDAC8-201ENST00000373554 TSKSQ9UJT2 592 aa14.49□□□□□ -0.09
HDAC8-201ENST00000373554 NAV1Q8NEY1 1877 aa14.48□□□□□ -0.09
HDAC8-201ENST00000373554 CTNND1O60716 968 aaKnown RBP14.48□□□□□ -0.09
HDAC8-201ENST00000373554 PPATQ06203 517 aa14.48□□□□□ -0.09
HDAC8-201ENST00000373554 PPIL2Q13356 520 aa14.48□□□□□ -0.09
HDAC8-201ENST00000373554 SLC4A8Q2Y0W8 1093 aa14.48□□□□□ -0.09
HDAC8-201ENST00000373554 SLFNL1Q499Z3 407 aa14.48□□□□□ -0.09
HDAC8-201ENST00000373554 TTC6Q86TZ1 520 aa14.48□□□□□ -0.09
HDAC8-201ENST00000373554 FOXP4Q8IVH2 680 aaPredicted RBP14.48□□□□□ -0.09
HDAC8-201ENST00000373554 APPBP2Q92624 585 aa14.48□□□□□ -0.09
HDAC8-201ENST00000373554 DDRGK1Q96HY6 314 aa14.48□□□□□ -0.09
HDAC8-201ENST00000373554 PRDM10Q9NQV6 1147 aa14.48□□□□□ -0.09
HDAC8-201ENST00000373554 DOCK1Q14185 1865 aa14.48□□□□□ -0.09
HDAC8-201ENST00000373554 DDX60LQ5H9U9 1706 aaKnown RBP14.47□□□□□ -0.09
HDAC8-201ENST00000373554 IRF6O14896 467 aa14.47□□□□□ -0.09
HDAC8-201ENST00000373554 RNF113AO15541 343 aaKnown RBP14.47□□□□□ -0.09
HDAC8-201ENST00000373554 ALDH1A1P00352 501 aa14.47□□□□□ -0.09
HDAC8-201ENST00000373554 CHGBP05060 677 aa14.47□□□□□ -0.09
HDAC8-201ENST00000373554 SLURP2P0DP57 97 aa14.47□□□□□ -0.09
HDAC8-201ENST00000373554 SNAPC2Q13487 334 aa14.47□□□□□ -0.09
HDAC8-201ENST00000373554 OTUD7BQ6GQQ9 843 aa14.47□□□□□ -0.09
HDAC8-201ENST00000373554 SDR42E1Q8WUS8 393 aa14.47□□□□□ -0.09
HDAC8-201ENST00000373554 MCM9Q9NXL9 1143 aa14.47□□□□□ -0.09
HDAC8-201ENST00000373554 SIPA1L1O43166 1804 aa14.47□□□□□ -0.09
HDAC8-201ENST00000373554 CCL15-CCL14A0A0B4J2E2 113 aa14.46□□□□□ -0.09
HDAC8-201ENST00000373554 POLR3DP05423 398 aaPredicted RBP14.46□□□□□ -0.09
HDAC8-201ENST00000373554 CETPP11597 493 aa14.46□□□□□ -0.09
HDAC8-201ENST00000373554 CCL15Q16663 113 aa14.46□□□□□ -0.09
HDAC8-201ENST00000373554 METTL16Q86W50 562 aaKnown RBP14.46□□□□□ -0.09
HDAC8-201ENST00000373554 IFNL1Q8IU54 200 aa14.46□□□□□ -0.09
HDAC8-201ENST00000373554 AMOTL1Q8IY63 956 aa14.46□□□□□ -0.09
HDAC8-201ENST00000373554 EVI5LQ96CN4 794 aa14.46□□□□□ -0.09
HDAC8-201ENST00000373554 MS4A4AQ96JQ5 239 aa14.46□□□□□ -0.09
HDAC8-201ENST00000373554 PUS7LQ9H0K6 701 aaKnown RBP14.46□□□□□ -0.09
HDAC8-201ENST00000373554 EHD4Q9H223 541 aa14.46□□□□□ -0.09
HDAC8-201ENST00000373554 ATP8A2Q9NTI2 1148 aa14.46□□□□□ -0.09
HDAC8-201ENST00000373554 SERPINB13Q9UIV8 391 aa14.46□□□□□ -0.09
HDAC8-201ENST00000373554 MYH1P12882 1939 aa14.46□□□□□ -0.09
HDAC8-201ENST00000373554 TESPA1A2RU30 521 aaPredicted RBP14.45□□□□□ -0.1
HDAC8-201ENST00000373554 IGF2BP3O00425 579 aaKnown RBP eCLIP14.45□□□□□ -0.1
HDAC8-201ENST00000373554 PTPRAP18433 802 aa14.45□□□□□ -0.1
HDAC8-201ENST00000373554 CAP2P40123 477 aa14.45□□□□□ -0.1
HDAC8-201ENST00000373554 DNAJC18Q9H819 358 aa14.45□□□□□ -0.1
HDAC8-201ENST00000373554 DCP1AQ9NPI6 582 aaPredicted RBP14.45□□□□□ -0.1
HDAC8-201ENST00000373554 SLC4A4Q9Y6R1 1079 aa14.45□□□□□ -0.1
HDAC8-201ENST00000373554 PRKAB2O43741 272 aa14.44□□□□□ -0.1
HDAC8-201ENST00000373554 PLEKHM2Q8IWE5 1019 aa14.44□□□□□ -0.1
HDAC8-201ENST00000373554 BRI3BPQ8WY22 251 aa14.44□□□□□ -0.1
HDAC8-201ENST00000373554 OSBP2Q969R2 916 aa14.44□□□□□ -0.1
HDAC8-201ENST00000373554 OSBPL3Q9H4L5 887 aa14.44□□□□□ -0.1
HDAC8-201ENST00000373554 KCNH4Q9UQ05 1017 aa14.44□□□□□ -0.1
HDAC8-201ENST00000373554 ZHX2Q9Y6X8 837 aa14.44□□□□□ -0.1
HDAC8-201ENST00000373554 TRIM6-TRIM34B2RNG4 842 aa14.43□□□□□ -0.1
HDAC8-201ENST00000373554 GPAA1O43292 621 aa14.43□□□□□ -0.1
HDAC8-201ENST00000373554 TBC1D8O95759 1140 aa14.43□□□□□ -0.1
HDAC8-201ENST00000373554 ASNSP08243 561 aa14.43□□□□□ -0.1
HDAC8-201ENST00000373554 GNAT2P19087 354 aa14.43□□□□□ -0.1
HDAC8-201ENST00000373554 STRBPQ96SI9 672 aaKnown RBP14.43□□□□□ -0.1
HDAC8-201ENST00000373554 PTPN18Q99952 460 aa14.43□□□□□ -0.1
HDAC8-201ENST00000373554 CFHR5Q9BXR6 569 aa14.43□□□□□ -0.1
HDAC8-201ENST00000373554 TBC1D2Q9BYX2 928 aa14.43□□□□□ -0.1
HDAC8-201ENST00000373554 ATAD5Q96QE3 1844 aa14.43□□□□□ -0.1
HDAC8-201ENST00000373554 TRIM75PA6NK02 468 aa14.42□□□□□ -0.1
HDAC8-201ENST00000373554 CXCL11O14625 94 aa14.42□□□□□ -0.1
HDAC8-201ENST00000373554 NEFLP07196 543 aa14.42□□□□□ -0.1
HDAC8-201ENST00000373554 CENPBP07199 599 aaPredicted RBP14.42□□□□□ -0.1
HDAC8-201ENST00000373554 PLCD1P51178 756 aa14.42□□□□□ -0.1
HDAC8-201ENST00000373554 AS3MTQ9HBK9 375 aa14.42□□□□□ -0.1
HDAC8-201ENST00000373554 ZCCHC17Q9NP64 241 aaKnown RBP14.42□□□□□ -0.1
HDAC8-201ENST00000373554 GINM1Q9NU53 330 aa14.42□□□□□ -0.1
HDAC8-201ENST00000373554 ARPP21Q9UBL0 812 aaPredicted RBP14.42□□□□□ -0.1
HDAC8-201ENST00000373554 TAOK2Q9UL54 1235 aa14.42□□□□□ -0.1
HDAC8-201ENST00000373554 USP17L5A8MUK1 530 aa14.41□□□□□ -0.1
HDAC8-201ENST00000373554 M0R2C6 588 aa14.41□□□□□ -0.1
HDAC8-201ENST00000373554 GDF11O95390 407 aa14.41□□□□□ -0.1
HDAC8-201ENST00000373554 RRP1BQ14684 758 aaKnown RBP14.41□□□□□ -0.1
HDAC8-201ENST00000373554 ZMYM1Q5SVZ6 1142 aa14.41□□□□□ -0.1
HDAC8-201ENST00000373554 TATDN1Q6P1N9 297 aa14.41□□□□□ -0.1
HDAC8-201ENST00000373554 GIMAP6Q6P9H5 292 aa14.41□□□□□ -0.1
HDAC8-201ENST00000373554 CCDC84Q86UT8 332 aaPredicted RBP14.41□□□□□ -0.1
HDAC8-201ENST00000373554 TICAM2Q86XR7 235 aa14.41□□□□□ -0.1
HDAC8-201ENST00000373554 FAM43AQ8N2R8 423 aa14.41□□□□□ -0.1
HDAC8-201ENST00000373554 RILPL2Q969X0 211 aa14.41□□□□□ -0.1
HDAC8-201ENST00000373554 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.41□□□□□ -0.1
HDAC8-201ENST00000373554 SWAP70Q9UH65 585 aa14.41□□□□□ -0.1
HDAC8-201ENST00000373554 ZBTB21Q9ULJ3 1066 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms