RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 NUP58Q9BVL2 599 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 CARD6Q9BX69 1037 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 NEDD9Q14511 834 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 DDB1Q16531 1140 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 GSTA5Q7RTV2 222 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 DIS3L2Q8IYB7 885 aaKnown RBP15.89■□□□□ 0.13
LMX1B-202ENST00000373474 FAM89AQ96GI7 184 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 ATP5JP18859 108 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 POSTNQ15063 836 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 OTUD7BQ6GQQ9 843 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 HS2ST1Q7LGA3 356 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 ARHGAP6O43182 974 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 ZNF500O60304 480 aaPredicted RBP15.88■□□□□ 0.13
LMX1B-202ENST00000373474 RPL13P26373 211 aaKnown RBP15.88■□□□□ 0.13
LMX1B-202ENST00000373474 TBC1D8BQ0IIM8 1120 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 LETM2Q2VYF4 491 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 TTC38Q5R3I4 469 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 ZNF594Q96JF6 807 aaPredicted RBP15.88■□□□□ 0.13
LMX1B-202ENST00000373474 C19orf44Q9H6X5 657 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 KDRP35968 1356 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 E7EWF7 191 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 PDE8AO60658 829 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 VWA3BQ502W6 1294 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 MYO5CQ9NQX4 1742 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 NKIRAS1Q9NYS0 192 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 IGSF3O75054 1194 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 KCNA6P17658 529 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 MAP2K2P36507 400 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 CCDC63Q8NA47 563 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 RABGAP1Q9Y3P9 1069 aa15.88■□□□□ 0.13
LMX1B-202ENST00000373474 IBTKQ9P2D0 1353 aaPredicted RBP15.87■□□□□ 0.13
LMX1B-202ENST00000373474 SH2D4BQ5SQS7 431 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 WDR78Q5VTH9 848 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 KRT40Q6A162 431 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 CROCCP2Q86T23 111 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 SSH3Q8TE77 659 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 PLEKHF1Q96S99 279 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 HDAC9Q9UKV0 1011 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 PPP2R5BQ15173 497 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 TMTC1Q8IUR5 882 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 ZNF526Q8TF50 670 aaPredicted RBP15.87■□□□□ 0.13
LMX1B-202ENST00000373474 TTC37Q6PGP7 1564 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 ATP10AO60312 1499 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 RFC1P35251 1148 aaPredicted RBP15.87■□□□□ 0.13
LMX1B-202ENST00000373474 CCDC26Q8TAB7 109 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 GPT2Q8TD30 523 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 V9GY48 417 aaPredicted RBP15.87■□□□□ 0.13
LMX1B-202ENST00000373474 CLASP1Q7Z460 1538 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 NDUFAB1O14561 156 aa15.87■□□□□ 0.13
LMX1B-202ENST00000373474 EPB41P11171 864 aaKnown RBP15.86■□□□□ 0.13
LMX1B-202ENST00000373474 ARID4AP29374 1257 aaPredicted RBP15.86■□□□□ 0.13
LMX1B-202ENST00000373474 CEP85LQ5SZL2 805 aa15.86■□□□□ 0.13
LMX1B-202ENST00000373474 CCNT1O60563 726 aaKnown RBP15.86■□□□□ 0.13
LMX1B-202ENST00000373474 CTDSPL2Q05D32 466 aa15.86■□□□□ 0.13
LMX1B-202ENST00000373474 UBLCP1Q8WVY7 318 aaPredicted RBP15.86■□□□□ 0.13
LMX1B-202ENST00000373474 TCHPQ9BT92 498 aa15.86■□□□□ 0.13
LMX1B-202ENST00000373474 ZSWIM6Q9HCJ5 1215 aa15.86■□□□□ 0.13
LMX1B-202ENST00000373474 TRAF5O00463 557 aa15.86■□□□□ 0.13
LMX1B-202ENST00000373474 RAPGEF1Q13905 1077 aa15.86■□□□□ 0.13
LMX1B-202ENST00000373474 DCAF17Q5H9S7 520 aaPredicted RBP15.86■□□□□ 0.13
LMX1B-202ENST00000373474 PHLDB2Q86SQ0 1253 aa15.86■□□□□ 0.13
LMX1B-202ENST00000373474 KCNK9Q9NPC2 374 aa15.86■□□□□ 0.13
LMX1B-202ENST00000373474 EEF2P13639 858 aaKnown RBP15.86■□□□□ 0.13
LMX1B-202ENST00000373474 PARP10Q53GL7 1025 aa15.86■□□□□ 0.13
LMX1B-202ENST00000373474 FYB2Q5VWT5 728 aa15.86■□□□□ 0.13
LMX1B-202ENST00000373474 ARHGAP24Q8N264 748 aa15.86■□□□□ 0.13
LMX1B-202ENST00000373474 CCDC38Q502W7 563 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 SEL1L2Q5TEA6 688 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 ERCC6LQ2NKX8 1250 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 CSGALNACT2Q8N6G5 542 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 GBP7Q8N8V2 638 aaPredicted RBP15.85■□□□□ 0.13
LMX1B-202ENST00000373474 MYCBPQ99417 103 aaPredicted RBP15.85■□□□□ 0.13
LMX1B-202ENST00000373474 IMPG2Q9BZV3 1241 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 NDC80O14777 642 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 GMNNO75496 209 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 WDHD1O75717 1129 aaPredicted RBP15.85■□□□□ 0.13
LMX1B-202ENST00000373474 ADALQ6DHV7 355 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 SECISBP2LQ93073 1101 aaKnown RBP15.85■□□□□ 0.13
LMX1B-202ENST00000373474 MTUS1Q9ULD2 1270 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 GJC1P36383 396 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 PTH1RQ03431 593 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 PHKBQ93100 1093 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 ZNF274Q96GC6 653 aaPredicted RBP15.85■□□□□ 0.13
LMX1B-202ENST00000373474 MYOM2P54296 1465 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 PPP1R7Q15435 360 aa15.85■□□□□ 0.13
LMX1B-202ENST00000373474 SUDS3Q9H7L9 328 aaPredicted RBP15.85■□□□□ 0.13
LMX1B-202ENST00000373474 MTX1Q13505 466 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 ASIC2Q16515 512 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 CFAP157Q5JU67 520 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 C8orf74Q6P047 294 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 LPIN2Q92539 896 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 ZBTB9Q96C00 473 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 PALD1Q9ULE6 856 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 NFE2L3Q9Y4A8 694 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 NDUFB9Q9Y6M9 179 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 NEURL1BA8MQ27 555 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 TTLL12Q14166 644 aaPredicted RBP15.84■□□□□ 0.13
LMX1B-202ENST00000373474 SAP30BPQ9UHR5 308 aaKnown RBP15.84■□□□□ 0.13
LMX1B-202ENST00000373474 FRMD4BQ9Y2L6 1034 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms