RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 USP31Q70CQ4 1352 aa6.22□□□□□ -1.41
ATG4A-204ENST00000372246 RGPD1P0DJD0 1748 aa6.22□□□□□ -1.41
ATG4A-204ENST00000372246 PLEKHG3A1L390 1219 aa6.22□□□□□ -1.41
ATG4A-204ENST00000372246 LRRIQ3A6PVS8 624 aaPredicted RBP6.22□□□□□ -1.41
ATG4A-204ENST00000372246 RNF225M0QZC1 329 aaPredicted RBP6.22□□□□□ -1.41
ATG4A-204ENST00000372246 ENC1O14682 589 aa6.22□□□□□ -1.41
ATG4A-204ENST00000372246 SYKP43405 635 aa6.22□□□□□ -1.41
ATG4A-204ENST00000372246 IRX3P78415 501 aaPredicted RBP6.22□□□□□ -1.41
ATG4A-204ENST00000372246 RSRC2Q7L4I2 434 aaKnown RBP6.22□□□□□ -1.41
ATG4A-204ENST00000372246 VSTM4Q8IW00 320 aa6.22□□□□□ -1.41
ATG4A-204ENST00000372246 TXLNBQ8N3L3 684 aa6.22□□□□□ -1.41
ATG4A-204ENST00000372246 RTEL1Q9NZ71 1219 aa6.22□□□□□ -1.41
ATG4A-204ENST00000372246 IMPACTQ9P2X3 320 aa6.22□□□□□ -1.41
ATG4A-204ENST00000372246 HDAC6Q9UBN7 1215 aa6.22□□□□□ -1.41
ATG4A-204ENST00000372246 HPS5Q9UPZ3 1129 aa6.22□□□□□ -1.41
ATG4A-204ENST00000372246 MAST3O60307 1309 aa6.21□□□□□ -1.41
ATG4A-204ENST00000372246 PHLPP2Q6ZVD8 1323 aa6.21□□□□□ -1.41
ATG4A-204ENST00000372246 PXDNQ92626 1479 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 hCG_1642624A0A1W2PR95 340 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 NEURL1BA8MQ27 555 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 SRGAP2O75044 1071 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 SCARF1Q14162 830 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 DHX8Q14562 1220 aaKnown RBP6.21□□□□□ -1.42
ATG4A-204ENST00000372246 WASHC4Q2M389 1173 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 ZNF569Q5MCW4 686 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 ANO1Q5XXA6 986 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 LMBR1LQ6UX01 489 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 FBXO18Q8NFZ0 1043 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 HMG20BQ9P0W2 317 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 MON2Q7Z3U7 1717 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.21□□□□□ -1.42
ATG4A-204ENST00000372246 ONECUT3O60422 494 aaPredicted RBP6.21□□□□□ -1.42
ATG4A-204ENST00000372246 ADORA1P30542 326 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 RFX5P48382 616 aaPredicted RBP6.21□□□□□ -1.42
ATG4A-204ENST00000372246 GTF2A1P52655 376 aaPredicted RBP6.21□□□□□ -1.42
ATG4A-204ENST00000372246 ANTXR2P58335 489 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 CHMP4BP1P59074 171 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 MYL5Q02045 173 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 GCKRQ14397 625 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 DNAJC21Q5F1R6 531 aaKnown RBP6.21□□□□□ -1.42
ATG4A-204ENST00000372246 LRRC31Q6UY01 552 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 SYNE3Q6ZMZ3 975 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 MICU3Q86XE3 530 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 LINS1Q8NG48 757 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 KCTD12Q96CX2 325 aaKnown RBP6.21□□□□□ -1.42
ATG4A-204ENST00000372246 PLCD4Q9BRC7 762 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.21□□□□□ -1.42
ATG4A-204ENST00000372246 CDHR5Q9HBB8 845 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 KCNJ14Q9UNX9 436 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 NFE2L3Q9Y4A8 694 aa6.21□□□□□ -1.42
ATG4A-204ENST00000372246 ADGRL3Q9HAR2 1447 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 CRYBG1Q9Y4K1 1723 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 EIF3CLB5ME19 914 aaKnown RBP6.2□□□□□ -1.42
ATG4A-204ENST00000372246 HIP1O00291 1037 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 PRC1O43663 620 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 ATP5JP18859 108 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 GUCY1A2P33402 732 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 ACTN2P35609 894 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 KIF23Q02241 960 aaPredicted RBP6.2□□□□□ -1.42
ATG4A-204ENST00000372246 RBL2Q08999 1139 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 BEND6Q5SZJ8 279 aaPredicted RBP6.2□□□□□ -1.42
ATG4A-204ENST00000372246 SLC9C2Q5TAH2 1124 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 SLC35F6Q8N357 371 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 SIRT1Q96EB6 747 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 EIF3CQ99613 913 aaKnown RBP6.2□□□□□ -1.42
ATG4A-204ENST00000372246 PUS7LQ9H0K6 701 aaKnown RBP6.2□□□□□ -1.42
ATG4A-204ENST00000372246 KCND1Q9NSA2 647 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 PAG1Q9NWQ8 432 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 NRXN3Q9Y4C0 1643 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 PTPRUQ92729 1446 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 NWD1Q149M9 1564 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 A0A087WZG4 1122 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 SMIM22K7EJ46 135 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 KIF2AO00139 706 aaPredicted RBP6.2□□□□□ -1.42
ATG4A-204ENST00000372246 CPLX1O14810 134 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 RNMTO43148 476 aaKnown RBP6.2□□□□□ -1.42
ATG4A-204ENST00000372246 CAVIN2O95810 425 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 TXLNAP40222 546 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 CCT6AP40227 531 aaKnown RBP6.2□□□□□ -1.42
ATG4A-204ENST00000372246 AFMP43652 599 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 SLC20A2Q08357 652 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 KRT32Q14532 448 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 MUM1L1Q5H9M0 696 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 VPS37DQ86XT2 251 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 GPR161Q8N6U8 529 aaKnown RBP6.2□□□□□ -1.42
ATG4A-204ENST00000372246 CNNM3Q8NE01 707 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 CAPZA3Q96KX2 299 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 ZKSCAN3Q9BRR0 538 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 NBPF3Q9H094 633 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 FAM204AQ9H8W3 233 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 SERTAD1Q9UHV2 236 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 TSKSQ9UJT2 592 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 MAPK8IP1Q9UQF2 711 aa6.2□□□□□ -1.42
ATG4A-204ENST00000372246 ZNF330Q9Y3S2 320 aaPredicted RBP6.2□□□□□ -1.42
ATG4A-204ENST00000372246 CUTAO60888 179 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 FGAP02671 866 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 MYBL2P10244 700 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 AKAP17AQ02040 695 aaKnown RBP6.19□□□□□ -1.42
ATG4A-204ENST00000372246 KIF4BQ2VIQ3 1234 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 CYB5R4Q7L1T6 521 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms