RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 TUBB8Q3ZCM7 444 aa13.19□□□□□ -0.3
PTPN1-201ENST00000371621 IL25Q9H293 177 aa13.19□□□□□ -0.3
PTPN1-201ENST00000371621 HAUS2Q9NVX0 235 aa13.19□□□□□ -0.3
PTPN1-201ENST00000371621 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
PTPN1-201ENST00000371621 HIP1RO75146 1068 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 PSEN1P49768 467 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 CD2APQ9Y5K6 639 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 A0A0D9SFI3 127 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 GOLGA8AA7E2F4 631 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 ZNF213O14771 459 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 GUCY2DQ02846 1103 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 BEND6Q5SZJ8 279 aaPredicted RBP13.18□□□□□ -0.3
PTPN1-201ENST00000371621 CCDC25Q86WR0 208 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 NOS1P29475 1434 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 VWA3AA6NCI4 1184 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 IDH1O75874 414 aaKnown RBP13.18□□□□□ -0.3
PTPN1-201ENST00000371621 SPAG5Q96R06 1193 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 PLIN2Q99541 437 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 CARD10Q9BWT7 1032 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 CTNND2Q9UQB3 1225 aa13.18□□□□□ -0.3
PTPN1-201ENST00000371621 LRRIQ3A6PVS8 624 aaPredicted RBP13.17□□□□□ -0.3
PTPN1-201ENST00000371621 TAF11Q15544 211 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 MYSM1Q5VVJ2 828 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 SMYD4Q8IYR2 804 aaPredicted RBP13.17□□□□□ -0.3
PTPN1-201ENST00000371621 GRAMD1CQ8IYS0 662 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 MIEF2Q96C03 454 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 CTNNA1P35221 906 aaKnown RBP13.17□□□□□ -0.3
PTPN1-201ENST00000371621 SOGA3Q5TF21 947 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 SUGP1Q8IWZ8 645 aaKnown RBP13.17□□□□□ -0.3
PTPN1-201ENST00000371621 IFT20Q8IY31 132 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 RCOR1Q9UKL0 485 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 SBNO2Q9Y2G9 1366 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 FANCAO15360 1455 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 WDR7Q9Y4E6 1490 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 BEND3Q5T5X7 828 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 NR1D1P20393 614 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 SPATS2Q86XZ4 545 aaKnown RBP13.17□□□□□ -0.3
PTPN1-201ENST00000371621 PHKBQ93100 1093 aa13.17□□□□□ -0.3
PTPN1-201ENST00000371621 ABTB1Q969K4 478 aaPredicted RBP13.17□□□□□ -0.3
PTPN1-201ENST00000371621 LBHD1Q9BQE6 289 aaPredicted RBP13.17□□□□□ -0.3
PTPN1-201ENST00000371621 NSRP1Q9H0G5 558 aaKnown RBP13.17□□□□□ -0.3
PTPN1-201ENST00000371621 EPN1Q9Y6I3 576 aaPredicted RBP13.17□□□□□ -0.3
PTPN1-201ENST00000371621 NSD2O96028 1365 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 PDHBP11177 359 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 FCHSD1Q86WN1 690 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 IFIT1P09914 478 aaKnown RBP13.16□□□□□ -0.3
PTPN1-201ENST00000371621 CEP128Q6ZU80 1094 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 VSIG1Q86XK7 387 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 EGFL6Q8IUX8 553 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 COG1Q8WTW3 980 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 OSBPL3Q9H4L5 887 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 MRPL44Q9H9J2 332 aaKnown RBP13.16□□□□□ -0.3
PTPN1-201ENST00000371621 SERTAD1Q9UHV2 236 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 L1RE1Q9UN81 338 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 ESYT3A0FGR9 886 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 POSTNQ15063 836 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
PTPN1-201ENST00000371621 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 TTC5Q8N0Z6 440 aa13.16□□□□□ -0.3
PTPN1-201ENST00000371621 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
PTPN1-201ENST00000371621 ADGRL1O94910 1474 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 GNAT3A8MTJ3 354 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 PRC1O43663 620 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 KRI1Q8N9T8 703 aaKnown RBP13.15□□□□□ -0.3
PTPN1-201ENST00000371621 GGT7Q9UJ14 662 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 IFIT3O14879 490 aaKnown RBP13.15□□□□□ -0.3
PTPN1-201ENST00000371621 KRT14P02533 472 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 CYP27A1Q02318 531 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 RESTQ13127 1097 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 NAA16Q6N069 864 aaPredicted RBP13.15□□□□□ -0.3
PTPN1-201ENST00000371621 KANK3Q6NY19 840 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 DIAPH2O60879 1101 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 SSRP1Q08945 709 aaKnown RBP13.15□□□□□ -0.3
PTPN1-201ENST00000371621 TBC1D8BQ0IIM8 1120 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 MUM1Q2TAK8 710 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 MLKLQ8NB16 471 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 TTC14Q96N46 770 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 EPB41L5Q9HCM4 733 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 MAP3K2Q9Y2U5 619 aa13.15□□□□□ -0.3
PTPN1-201ENST00000371621 ADCY10Q96PN6 1610 aa13.15□□□□□ -0.31
PTPN1-201ENST00000371621 SYNRGQ9UMZ2 1314 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 H0Y3Z8 333 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 PAK2Q13177 524 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 RNF10Q8N5U6 811 aaKnown RBP13.14□□□□□ -0.31
PTPN1-201ENST00000371621 GBP5Q96PP8 586 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
PTPN1-201ENST00000371621 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 BRAPQ7Z569 592 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 NSMCE1Q8WV22 266 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 ARHGEF2Q92974 986 aaKnown RBP13.14□□□□□ -0.31
PTPN1-201ENST00000371621 KLHL29Q96CT2 875 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 PLEKHF1Q96S99 279 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 VCXQ9H320 206 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 DDX21Q9NR30 783 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTPN1-201ENST00000371621 CNGA1P29973 690 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 241.9 ms