RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 USP5P45974 858 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 SHC4Q6S5L8 630 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 USP49Q70CQ1 688 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 CNNM3Q8NE01 707 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 TAF1P21675 1872 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 GOLGA8FQ08AF8 430 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 GOLGA8DPQ0D2H9 430 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 ENAHQ8N8S7 591 aaPredicted RBP13.56□□□□□ -0.24
PDE6C-201ENST00000371447 POLR3EQ9NVU0 708 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 VEGFAP15692 232 aaPredicted RBP13.55□□□□□ -0.24
PDE6C-201ENST00000371447 IQCB1Q15051 598 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 GRIK5Q16478 980 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 LONRF3Q496Y0 759 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 SLC44A5Q8NCS7 719 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 CPVLQ9H3G5 476 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
PDE6C-201ENST00000371447 IFNKQ9P0W0 207 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 CTAGE5O15320 804 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 ATP1A3P13637 1013 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 GNAT2P19087 354 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 UBE4AQ14139 1066 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 SLC39A14Q15043 492 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 AXDND1Q5T1B0 1012 aaPredicted RBP13.55□□□□□ -0.24
PDE6C-201ENST00000371447 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 IQCA1Q86XH1 822 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 ZNF804BA4D1E1 1349 aa13.55□□□□□ -0.24
PDE6C-201ENST00000371447 ABCA3Q99758 1704 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 YEATS4O95619 227 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 AFMP43652 599 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 ZNF174Q15697 407 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 TPD52L1Q16890 204 aaPredicted RBP13.54□□□□□ -0.24
PDE6C-201ENST00000371447 NOSTRINQ8IVI9 506 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 DHX40Q8IX18 779 aaKnown RBP13.54□□□□□ -0.24
PDE6C-201ENST00000371447 MYH14Q7Z406 1995 aaKnown RBP13.54□□□□□ -0.24
PDE6C-201ENST00000371447 POLR2DO15514 142 aaKnown RBP13.54□□□□□ -0.24
PDE6C-201ENST00000371447 KLHL10Q6JEL2 608 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 CTR9Q6PD62 1173 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 CLEC4GQ6UXB4 293 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 BARGINQ6ZT62 677 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 TDRD7Q8NHU6 1098 aaKnown RBP13.54□□□□□ -0.24
PDE6C-201ENST00000371447 STAG1Q8WVM7 1258 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
PDE6C-201ENST00000371447 NARFQ9UHQ1 456 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 STX8Q9UNK0 236 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 NUP98P52948 1817 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 LRP6O75581 1613 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 COL4A1P02462 1669 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.54□□□□□ -0.24
PDE6C-201ENST00000371447 RIMBP2O15034 1052 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
PDE6C-201ENST00000371447 CRACR2BQ8N4Y2 399 aaPredicted RBP13.54□□□□□ -0.24
PDE6C-201ENST00000371447 ZSCAN10Q96SZ4 725 aaPredicted RBP13.54□□□□□ -0.24
PDE6C-201ENST00000371447 RIOK1Q9BRS2 568 aaKnown RBP13.54□□□□□ -0.24
PDE6C-201ENST00000371447 NAT10Q9H0A0 1025 aaKnown RBP13.54□□□□□ -0.24
PDE6C-201ENST00000371447 RAD21O60216 631 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 RPS6KA4O75676 772 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 LIFRP42702 1097 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 EARS2Q5JPH6 523 aaKnown RBP13.53□□□□□ -0.24
PDE6C-201ENST00000371447 RASGRP2Q7LDG7 609 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 TRMT44Q8IYL2 757 aaKnown RBP13.53□□□□□ -0.24
PDE6C-201ENST00000371447 KIAA1524Q8TCG1 905 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 KCNH3Q9ULD8 1083 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 LAMA4Q16363 1823 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 FMNL1O95466 1100 aaPredicted RBP13.53□□□□□ -0.24
PDE6C-201ENST00000371447 CDC25AP30304 524 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 SF3B3Q15393 1217 aaKnown RBP13.53□□□□□ -0.24
PDE6C-201ENST00000371447 ALX1Q15699 326 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 SGMS1Q86VZ5 419 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 TGFBRAP1Q8WUH2 860 aa13.53□□□□□ -0.24
PDE6C-201ENST00000371447 NSUN4Q96CB9 384 aaKnown RBP13.53□□□□□ -0.24
PDE6C-201ENST00000371447 C6orf229H3BNL8 230 aa13.52□□□□□ -0.24
PDE6C-201ENST00000371447 GOLGA8HP0CJ92 632 aa13.52□□□□□ -0.24
PDE6C-201ENST00000371447 RBM43Q6ZSC3 357 aaKnown RBP13.52□□□□□ -0.24
PDE6C-201ENST00000371447 JMYQ8N9B5 988 aa13.52□□□□□ -0.24
PDE6C-201ENST00000371447 MKNK2Q9HBH9 465 aa13.52□□□□□ -0.24
PDE6C-201ENST00000371447 VAT1LQ9HCJ6 419 aa13.52□□□□□ -0.24
PDE6C-201ENST00000371447 DOT1LQ8TEK3 1739 aa13.52□□□□□ -0.24
PDE6C-201ENST00000371447 SERPINC1P01008 464 aa13.52□□□□□ -0.24
PDE6C-201ENST00000371447 IFNAR1P17181 557 aa13.52□□□□□ -0.24
PDE6C-201ENST00000371447 TOB1P50616 345 aaPredicted RBP13.52□□□□□ -0.24
PDE6C-201ENST00000371447 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.24
PDE6C-201ENST00000371447 GPKOWQ92917 476 aaPredicted RBP eCLIP13.52□□□□□ -0.24
PDE6C-201ENST00000371447 DHX58Q96C10 678 aa13.52□□□□□ -0.24
PDE6C-201ENST00000371447 XPO4Q9C0E2 1151 aaKnown RBP13.52□□□□□ -0.24
PDE6C-201ENST00000371447 MMP1P03956 469 aa13.52□□□□□ -0.25
PDE6C-201ENST00000371447 SKILP12757 684 aa13.52□□□□□ -0.25
PDE6C-201ENST00000371447 CMA1P23946 247 aa13.52□□□□□ -0.25
PDE6C-201ENST00000371447 OLFM4Q6UX06 510 aa13.52□□□□□ -0.25
PDE6C-201ENST00000371447 RPGRQ92834 1020 aaKnown RBP13.52□□□□□ -0.25
PDE6C-201ENST00000371447 CRNKL1Q9BZJ0 848 aaKnown RBP13.52□□□□□ -0.25
PDE6C-201ENST00000371447 USP17L3A6NCW0 530 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 USP17L4A6NCW7 530 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 USP27XA6NNY8 438 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 TPM2P07951 284 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 ATL3Q6DD88 541 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 USP17L1Q7RTZ2 530 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 NYXQ9GZU5 481 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms