RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 DCAF17Q5H9S7 520 aaPredicted RBP16.58■□□□□ 0.25
NDC1-201ENST00000371429 MSANTD4Q8NCY6 345 aa16.58■□□□□ 0.25
NDC1-201ENST00000371429 SDR42E1Q8WUS8 393 aa16.58■□□□□ 0.25
NDC1-201ENST00000371429 PIGBQ92521 554 aa16.58■□□□□ 0.25
NDC1-201ENST00000371429 LRWD1Q9UFC0 647 aa16.58■□□□□ 0.25
NDC1-201ENST00000371429 UBXN1Q04323 297 aa16.58■□□□□ 0.24
NDC1-201ENST00000371429 CEP135Q66GS9 1140 aa16.58■□□□□ 0.24
NDC1-201ENST00000371429 IFNL3Q8IZI9 196 aa16.58■□□□□ 0.24
NDC1-201ENST00000371429 CCDC42Q96M95 316 aa16.58■□□□□ 0.24
NDC1-201ENST00000371429 COPRSQ9NQ92 184 aa16.58■□□□□ 0.24
NDC1-201ENST00000371429 hCG_1642624A0A1W2PR95 340 aa16.58■□□□□ 0.24
NDC1-201ENST00000371429 CERKLQ49MI3 558 aaPredicted RBP16.58■□□□□ 0.24
NDC1-201ENST00000371429 REXO1Q8N1G1 1221 aaKnown RBP16.58■□□□□ 0.24
NDC1-201ENST00000371429 TTC12Q9H892 705 aaPredicted RBP16.58■□□□□ 0.24
NDC1-201ENST00000371429 GCOM1H8Y6P7 765 aaPredicted RBP16.57■□□□□ 0.24
NDC1-201ENST00000371429 MYZAPP0CAP1 466 aa16.57■□□□□ 0.24
NDC1-201ENST00000371429 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
NDC1-201ENST00000371429 PRPHP41219 470 aa16.57■□□□□ 0.24
NDC1-201ENST00000371429 PDE4DQ08499 809 aa16.57■□□□□ 0.24
NDC1-201ENST00000371429 EEF2P13639 858 aaKnown RBP16.57■□□□□ 0.24
NDC1-201ENST00000371429 PHKA1P46020 1223 aa16.57■□□□□ 0.24
NDC1-201ENST00000371429 PLEKHF1Q96S99 279 aa16.57■□□□□ 0.24
NDC1-201ENST00000371429 SLC5A4Q9NY91 659 aa16.57■□□□□ 0.24
NDC1-201ENST00000371429 PPP1R2P41236 205 aa16.57■□□□□ 0.24
NDC1-201ENST00000371429 SNX29Q8TEQ0 813 aa16.57■□□□□ 0.24
NDC1-201ENST00000371429 PUS3Q9BZE2 481 aaKnown RBP16.57■□□□□ 0.24
NDC1-201ENST00000371429 GJC1P36383 396 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 FAM160A1Q05DH4 1040 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 STRN3Q13033 797 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 KRT40Q6A162 431 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 CCDC66A2RUB6 948 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 SKILP12757 684 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 ERFEQ4G0M1 354 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 ZNF654Q8IZM8 581 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 LRRC45Q96CN5 670 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.247e-6■□□□□ 8.5
NDC1-201ENST00000371429 PDCL2Q8N4E4 241 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 HAUS7Q99871 368 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 BCCIPQ9P287 314 aaKnown RBP eCLIP16.56■□□□□ 0.24
NDC1-201ENST00000371429 KCNH3Q9ULD8 1083 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 STK24Q9Y6E0 443 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 PRAMEF22A3QJZ6 481 aa16.56■□□□□ 0.24
NDC1-201ENST00000371429 BLMP54132 1417 aaPredicted RBP16.55■□□□□ 0.24
NDC1-201ENST00000371429 EPB41P11171 864 aaKnown RBP16.55■□□□□ 0.24
NDC1-201ENST00000371429 CCDC186Q7Z3E2 898 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 TRIM6Q9C030 488 aaPredicted RBP16.55■□□□□ 0.24
NDC1-201ENST00000371429 ZSWIM4Q9H7M6 989 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 FSD2A1L4K1 749 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 ICA1Q05084 483 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 WDR44Q5JSH3 913 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 SPC25Q9HBM1 224 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 GCC2Q8IWJ2 1684 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 MAEAQ7L5Y9 396 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 KCNJ14Q9UNX9 436 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 AFF2P51816 1311 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 PABPN1LA6NDY0 278 aaKnown RBP16.55■□□□□ 0.24
NDC1-201ENST00000371429 TACC1O75410 805 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 ALAS1P13196 640 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 DNM2P50570 870 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 RAPGEF1Q13905 1077 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 UIMC1Q96RL1 719 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 DNM3Q9UQ16 869 aa16.55■□□□□ 0.24
NDC1-201ENST00000371429 PRDM15P57071 1507 aaPredicted RBP16.54■□□□□ 0.24
NDC1-201ENST00000371429 KIF5AQ12840 1032 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 CNNM4Q6P4Q7 775 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 NLRX1Q86UT6 975 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 LMBR1Q8WVP7 490 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 EXOC7Q9UPT5 735 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 ERVV-1B6SEH8 477 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 CALCRLQ16602 461 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 VPS54Q9P1Q0 977 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 HSPA4P34932 840 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 KRT83P78385 493 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 ZSCAN10Q96SZ4 725 aaPredicted RBP16.54■□□□□ 0.24
NDC1-201ENST00000371429 PSMD1Q99460 953 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 SELENOOQ9BVL4 669 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 A0A0D9SFI3 127 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 SMCO2A6NFE2 343 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 POTEB2H3BUK9 544 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 MAP2K1Q02750 393 aaPredicted RBP16.54■□□□□ 0.24
NDC1-201ENST00000371429 SEC62Q99442 399 aaKnown RBP16.54■□□□□ 0.24
NDC1-201ENST00000371429 DBNDD1Q9H9R9 158 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 LUC7L2Q9Y383 392 aaKnown RBP16.54■□□□□ 0.24
NDC1-201ENST00000371429 HEG1Q9ULI3 1381 aa16.54■□□□□ 0.24
NDC1-201ENST00000371429 SEMA3EO15041 775 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 NLRP10Q86W26 655 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 PNMA1Q8ND90 353 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 GLG1Q92896 1179 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 SRP68Q9UHB9 627 aaKnown RBP16.53■□□□□ 0.24
NDC1-201ENST00000371429 CLRN2A0PK11 232 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 CIAO1O76071 339 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 KIF22Q14807 665 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 GNPTABQ3T906 1256 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 FAM173BQ6P4H8 233 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 IKBKGQ9Y6K9 419 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 PLCB3Q01970 1234 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms