RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ERICH2A1L162 156 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 GOLGA8AA7E2F4 631 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 F8W031 263 aaPredicted RBP20.51■□□□□ 0.87
SSBP3-203ENST00000371319 PPFIA3O75145 1194 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 ZBTB7AO95365 584 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 KIAA2012Q0VF49 1180 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 RESTQ13127 1097 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 AOC3Q16853 763 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 FERMT3Q86UX7 667 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 MICU3Q86XE3 530 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 TMTC2Q8N394 836 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 SUPT20HQ8NEM7 779 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 ZSCAN10Q96SZ4 725 aaPredicted RBP20.51■□□□□ 0.87
SSBP3-203ENST00000371319 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
SSBP3-203ENST00000371319 RANBP6O60518 1105 aaKnown RBP20.51■□□□□ 0.87
SSBP3-203ENST00000371319 ADD1P35611 737 aaKnown RBP20.51■□□□□ 0.87
SSBP3-203ENST00000371319 PDE4BQ07343 736 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 USP48Q86UV5 1035 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 GDPD2Q9HCC8 539 aa20.51■□□□□ 0.87
SSBP3-203ENST00000371319 DDX49Q9Y6V7 483 aaKnown RBP20.51■□□□□ 0.87
SSBP3-203ENST00000371319 FLT1P17948 1338 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 PSME4Q14997 1843 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 H3BQV1 296 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 CPLX1O14810 134 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 DNM1Q05193 864 aaKnown RBP20.5■□□□□ 0.87
SSBP3-203ENST00000371319 NTRK3Q16288 839 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 SLC4A8Q2Y0W8 1093 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 GRIPAP1Q4V328 841 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 DACT2Q5SW24 774 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 IFFO2Q5TF58 517 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 STRIP1Q5VSL9 837 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 ENAHQ8N8S7 591 aaPredicted RBP20.5■□□□□ 0.87
SSBP3-203ENST00000371319 GPT2Q8TD30 523 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 DYNLL2Q96FJ2 89 aa20.5■□□□□ 0.87
SSBP3-203ENST00000371319 GZF1Q9H116 711 aaPredicted RBP20.5■□□□□ 0.87
SSBP3-203ENST00000371319 ORC3Q9UBD5 711 aaPredicted RBP20.5■□□□□ 0.87
SSBP3-203ENST00000371319 SAP30BPQ9UHR5 308 aaKnown RBP20.5■□□□□ 0.87
SSBP3-203ENST00000371319 FOSBP53539 338 aa20.49■□□□□ 0.87
SSBP3-203ENST00000371319 RCAN1P53805 252 aa20.49■□□□□ 0.87
SSBP3-203ENST00000371319 CCDC93Q567U6 631 aa20.49■□□□□ 0.87
SSBP3-203ENST00000371319 HHIPL2Q6UWX4 724 aa20.49■□□□□ 0.87
SSBP3-203ENST00000371319 SYNE3Q6ZMZ3 975 aa20.49■□□□□ 0.87
SSBP3-203ENST00000371319 CCDC144CPQ8IYA2 1237 aa20.49■□□□□ 0.87
SSBP3-203ENST00000371319 ZNF654Q8IZM8 581 aa20.49■□□□□ 0.87
SSBP3-203ENST00000371319 DEKP35659 375 aaKnown RBP20.48■□□□□ 0.87
SSBP3-203ENST00000371319 SCNN1DP51172 638 aa20.48■□□□□ 0.87
SSBP3-203ENST00000371319 PLCD1P51178 756 aa20.48■□□□□ 0.87
SSBP3-203ENST00000371319 FAM47AQ5JRC9 791 aa20.48■□□□□ 0.87
SSBP3-203ENST00000371319 AMOTL1Q8IY63 956 aa20.48■□□□□ 0.87
SSBP3-203ENST00000371319 MTFR1LQ9H019 292 aa20.48■□□□□ 0.87
SSBP3-203ENST00000371319 ATF5Q9Y2D1 282 aaPredicted RBP20.48■□□□□ 0.87
SSBP3-203ENST00000371319 USP17L3A6NCW0 530 aa20.47■□□□□ 0.87
SSBP3-203ENST00000371319 USP17L4A6NCW7 530 aa20.47■□□□□ 0.87
SSBP3-203ENST00000371319 CDKL5O76039 1030 aa20.47■□□□□ 0.87
SSBP3-203ENST00000371319 POLR3DP05423 398 aaPredicted RBP20.47■□□□□ 0.87
SSBP3-203ENST00000371319 NT5C2P49902 561 aa20.47■□□□□ 0.87
SSBP3-203ENST00000371319 USP17L1Q7RTZ2 530 aa20.47■□□□□ 0.87
SSBP3-203ENST00000371319 IQCA1Q86XH1 822 aa20.47■□□□□ 0.87
SSBP3-203ENST00000371319 RTKN2Q8IZC4 609 aa20.47■□□□□ 0.87
SSBP3-203ENST00000371319 BRCA1P38398 1863 aaKnown RBP20.47■□□□□ 0.87
SSBP3-203ENST00000371319 GADD45BO75293 160 aaPredicted RBP20.46■□□□□ 0.87
SSBP3-203ENST00000371319 FAM173BQ6P4H8 233 aa20.46■□□□□ 0.87
SSBP3-203ENST00000371319 PSMD1Q99460 953 aa20.46■□□□□ 0.87
SSBP3-203ENST00000371319 ZSCAN16Q9H4T2 348 aaPredicted RBP20.46■□□□□ 0.87
SSBP3-203ENST00000371319 YDJCA8MPS7 323 aa20.46■□□□□ 0.87
SSBP3-203ENST00000371319 PPIP5K2O43314 1243 aa20.46■□□□□ 0.87
SSBP3-203ENST00000371319 TGFB2P61812 414 aa20.46■□□□□ 0.87
SSBP3-203ENST00000371319 RTN1Q16799 776 aa20.46■□□□□ 0.87
SSBP3-203ENST00000371319 IFIT1BQ5T764 474 aaKnown RBP20.46■□□□□ 0.87
SSBP3-203ENST00000371319 CPLX2Q6PUV4 134 aaKnown RBP20.46■□□□□ 0.87
SSBP3-203ENST00000371319 TEKT1Q969V4 418 aa20.46■□□□□ 0.87
SSBP3-203ENST00000371319 MRIQ9BWK5 157 aa20.46■□□□□ 0.87
SSBP3-203ENST00000371319 STK36Q9NRP7 1315 aa20.46■□□□□ 0.87
SSBP3-203ENST00000371319 FIBPO43427 364 aa20.45■□□□□ 0.86
SSBP3-203ENST00000371319 NMT2O60551 498 aa20.45■□□□□ 0.86
SSBP3-203ENST00000371319 WDHD1O75717 1129 aaPredicted RBP20.45■□□□□ 0.86
SSBP3-203ENST00000371319 NCLP19338 710 aaKnown RBP20.45■□□□□ 0.86
SSBP3-203ENST00000371319 CRKP46108 304 aa20.45■□□□□ 0.86
SSBP3-203ENST00000371319 APOBEC3HQ6NTF7 200 aaKnown RBP20.45■□□□□ 0.86
SSBP3-203ENST00000371319 C16orf86Q6ZW13 317 aa20.45■□□□□ 0.86
SSBP3-203ENST00000371319 RGS22Q8NE09 1264 aa20.45■□□□□ 0.86
SSBP3-203ENST00000371319 C8orf76Q96K31 380 aa20.45■□□□□ 0.86
SSBP3-203ENST00000371319 COL4A5P29400 1685 aa20.45■□□□□ 0.86
SSBP3-203ENST00000371319 FMNL1O95466 1100 aaPredicted RBP20.44■□□□□ 0.86
SSBP3-203ENST00000371319 IFNAR1P17181 557 aa20.44■□□□□ 0.86
SSBP3-203ENST00000371319 POLD1P28340 1107 aa20.44■□□□□ 0.86
SSBP3-203ENST00000371319 KRT85P78386 507 aa20.44■□□□□ 0.86
SSBP3-203ENST00000371319 GUCY1B3Q02153 619 aa20.44■□□□□ 0.86
SSBP3-203ENST00000371319 CDC42EP5Q6NZY7 148 aa20.44■□□□□ 0.86
SSBP3-203ENST00000371319 FANCBQ8NB91 859 aa20.44■□□□□ 0.86
SSBP3-203ENST00000371319 SLC44A5Q8NCS7 719 aa20.44■□□□□ 0.86
SSBP3-203ENST00000371319 PHKBQ93100 1093 aa20.44■□□□□ 0.86
SSBP3-203ENST00000371319 DDX4Q9NQI0 724 aaKnown RBP20.44■□□□□ 0.86
SSBP3-203ENST00000371319 USP40Q9NVE5 1235 aa20.44■□□□□ 0.86
SSBP3-203ENST00000371319 TSPY2A6NKD2 308 aa20.43■□□□□ 0.86
SSBP3-203ENST00000371319 MBD3O95983 291 aa20.43■□□□□ 0.86
SSBP3-203ENST00000371319 IARSP41252 1262 aaKnown RBP20.43■□□□□ 0.86
SSBP3-203ENST00000371319 HDLBPQ00341 1268 aaKnown RBP20.43■□□□□ 0.86
SSBP3-203ENST00000371319 TFAP4Q01664 338 aa20.43■□□□□ 0.86
SSBP3-203ENST00000371319 R3HDM1Q15032 1099 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms