RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 ZYXQ15942 572 aaKnown RBP8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 NLGN1Q8N2Q7 840 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 PNMA1Q8ND90 353 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 CLSTN2Q9H4D0 955 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 USP40Q9NVE5 1235 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 KCNH3Q9ULD8 1083 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 MAPK8IP1Q9UQF2 711 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 JCADQ9P266 1359 aa8.15□□□□□ -1.11
TGFBR3-202ENST00000370399 FSD2A1L4K1 749 aa8.15□□□□□ -1.11
TGFBR3-202ENST00000370399 RILPL1Q5EBL4 403 aa8.15□□□□□ -1.11
TGFBR3-202ENST00000370399 JAKMIP3Q5VZ66 844 aa8.15□□□□□ -1.11
TGFBR3-202ENST00000370399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.15□□□□□ -1.11
TGFBR3-202ENST00000370399 CCDC12Q8WUD4 166 aaPredicted RBP8.15□□□□□ -1.11
TGFBR3-202ENST00000370399 GPKOWQ92917 476 aaPredicted RBP eCLIP8.15□□□□□ -1.11
TGFBR3-202ENST00000370399 ZMYM6O95789 1325 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 UQCRHLA0A096LP55 91 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 GSG1L2A8MUP6 293 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 NMT2O60551 498 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 UQCRHP07919 91 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 PARP1P09874 1014 aaKnown RBP8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 UBASH3AP57075 661 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 UBA5Q9GZZ9 404 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 BMP2KQ9NSY1 1161 aaPredicted RBP8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 MED23Q9ULK4 1368 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 MON2Q7Z3U7 1717 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 SH2B2O14492 632 aaPredicted RBP8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 CBFA2T2O43439 604 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 ATP2B4P23634 1241 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 GRAPQ13588 217 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 C2CD5Q86YS7 1000 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 SLC44A5Q8NCS7 719 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 GRAPLQ8TC17 118 aaPredicted RBP8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 ZKSCAN5Q9Y2L8 839 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 KLRK1P26718 216 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 NDUFA8P51970 172 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 TXNRD1Q16881 649 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 MNS1Q8NEH6 495 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 RRP36Q96EU6 259 aaKnown RBP8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 IFNKQ9P0W0 207 aa8.14□□□□□ -1.11
TGFBR3-202ENST00000370399 OFD1O75665 1012 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 CALML3P27482 149 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 STAT6P42226 847 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 LARGE2Q8N3Y3 721 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 CCDC148Q8NFR7 591 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 CERKQ8TCT0 537 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 RBM28Q9NW13 759 aaKnown RBP8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 ARPP21Q9UBL0 812 aaPredicted RBP8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 LEMD3Q9Y2U8 911 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 ALDH1B1P30837 517 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 RRAGBQ5VZM2 374 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 C3orf67Q6ZVT6 689 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 NOSTRINQ8IVI9 506 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 RASGRP4Q8TDF6 673 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 CPVLQ9H3G5 476 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 SENP2Q9HC62 589 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 USP17L3A6NCW0 530 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 USP17L4A6NCW7 530 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 PPIP5K2O43314 1243 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 CACNB3P54284 484 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 ATL3Q6DD88 541 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 ADALQ6DHV7 355 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 BARGINQ6ZT62 677 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 USP17L1Q7RTZ2 530 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 PFKFB1P16118 471 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 RXRBP28702 533 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 CDC27P30260 824 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 RESTQ13127 1097 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 ENOX2Q16206 610 aaKnown RBP8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 ZNF827Q17R98 1081 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 CCDC178Q5BJE1 867 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 MB21D2Q8IYB1 491 aaPredicted RBP8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 CCDC112Q8NEF3 446 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 C6orf50Q9HD87 102 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 ATP8A2Q9NTI2 1148 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 ANKRD26Q9UPS8 1709 aa8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 FRMPD2Q68DX3 1309 aaPredicted RBP8.13□□□□□ -1.11
TGFBR3-202ENST00000370399 PPEF1O14829 653 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 CLCN1P35523 988 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 PNOCQ13519 176 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 TMEM266Q2M3C6 531 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 LRP10Q7Z4F1 713 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 TBC1D22AQ8WUA7 517 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 BBOX1O75936 387 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 YEATS4O95619 227 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 CAVIN2O95810 425 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 SKILP12757 684 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 ARID4AP29374 1257 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 TTC38Q5R3I4 469 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 DTHD1Q6ZMT9 781 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 NFAT5O94916 1531 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 KLRF2D3W0D1 207 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 TNNT1P13805 278 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 PRKCSHP14314 528 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 CDC25AP30304 524 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 PDE6BP35913 854 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 KIF23Q02241 960 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 NOLC1Q14978 699 aaKnown RBP eCLIP8.12□□□□□ -1.115e-7■■□□□ 13.4
TGFBR3-202ENST00000370399 PTPN14Q15678 1187 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms