RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 MTMR6Q9Y217 621 aa20.35■□□□□ 0.85
UBE3D-203ENST00000369747 CYP2D7A0A087X1C5 515 aa20.35■□□□□ 0.85
UBE3D-203ENST00000369747 E7EWF7 191 aa20.35■□□□□ 0.85
UBE3D-203ENST00000369747 MRE11P49959 708 aa20.35■□□□□ 0.85
UBE3D-203ENST00000369747 SLC4A8Q2Y0W8 1093 aa20.35■□□□□ 0.85
UBE3D-203ENST00000369747 NBPF9Q3BBW0 867 aa20.35■□□□□ 0.85
UBE3D-203ENST00000369747 DHX32Q7L7V1 743 aaKnown RBP20.35■□□□□ 0.85
UBE3D-203ENST00000369747 DDX4Q9NQI0 724 aaKnown RBP20.35■□□□□ 0.85
UBE3D-203ENST00000369747 ECM29Q5VYK3 1845 aa20.35■□□□□ 0.85
UBE3D-203ENST00000369747 ZMYM6O95789 1325 aa20.34■□□□□ 0.85
UBE3D-203ENST00000369747 FLT1P17948 1338 aa20.34■□□□□ 0.85
UBE3D-203ENST00000369747 USP17L12C9JPN9 530 aa20.34■□□□□ 0.85
UBE3D-203ENST00000369747 USP17L21D6R901 530 aa20.34■□□□□ 0.85
UBE3D-203ENST00000369747 WNT10BO00744 389 aa20.34■□□□□ 0.85
UBE3D-203ENST00000369747 EXOSC10Q01780 885 aaKnown RBP20.34■□□□□ 0.85
UBE3D-203ENST00000369747 PICALMQ13492 652 aa20.34■□□□□ 0.85
UBE3D-203ENST00000369747 GIMAP6Q6P9H5 292 aa20.34■□□□□ 0.85
UBE3D-203ENST00000369747 NBPF3Q9H094 633 aa20.34■□□□□ 0.85
UBE3D-203ENST00000369747 GRPEL1Q9HAV7 217 aa20.34■□□□□ 0.85
UBE3D-203ENST00000369747 GPRC5DQ9NZD1 345 aa20.34■□□□□ 0.85
UBE3D-203ENST00000369747 STK3Q13188 491 aa20.33■□□□□ 0.85
UBE3D-203ENST00000369747 IMMTQ16891 758 aaKnown RBP20.33■□□□□ 0.85
UBE3D-203ENST00000369747 TBC1D10BQ4KMP7 808 aaPredicted RBP20.33■□□□□ 0.85
UBE3D-203ENST00000369747 CTR9Q6PD62 1173 aa20.33■□□□□ 0.85
UBE3D-203ENST00000369747 MTMR14Q8NCE2 650 aa20.33■□□□□ 0.85
UBE3D-203ENST00000369747 GTF3C6Q969F1 213 aa20.33■□□□□ 0.85
UBE3D-203ENST00000369747 ZBED3Q96IU2 234 aaPredicted RBP20.33■□□□□ 0.85
UBE3D-203ENST00000369747 LRRC2Q9BYS8 371 aa20.33■□□□□ 0.85
UBE3D-203ENST00000369747 MCM9Q9NXL9 1143 aa20.33■□□□□ 0.85
UBE3D-203ENST00000369747 FOCADQ5VW36 1801 aa20.33■□□□□ 0.85
UBE3D-203ENST00000369747 CLRN2A0PK11 232 aa20.33■□□□□ 0.84
UBE3D-203ENST00000369747 MINDY4BA8MYZ0 360 aa20.33■□□□□ 0.84
UBE3D-203ENST00000369747 ZNF213O14771 459 aa20.33■□□□□ 0.84
UBE3D-203ENST00000369747 ZSCAN23Q3MJ62 389 aa20.33■□□□□ 0.84
UBE3D-203ENST00000369747 SAP30BPQ9UHR5 308 aaKnown RBP20.33■□□□□ 0.84
UBE3D-203ENST00000369747 CYP2D6P10635 497 aa20.32■□□□□ 0.84
UBE3D-203ENST00000369747 EPS15P42566 896 aa20.32■□□□□ 0.84
UBE3D-203ENST00000369747 ZNF445P59923 1031 aa20.32■□□□□ 0.84
UBE3D-203ENST00000369747 TMEM87AQ8NBN3 555 aa20.32■□□□□ 0.84
UBE3D-203ENST00000369747 BRF1Q92994 677 aa20.32■□□□□ 0.84
UBE3D-203ENST00000369747 AGXT2Q9BYV1 514 aa20.32■□□□□ 0.84
UBE3D-203ENST00000369747 GDPD2Q9HCC8 539 aa20.32■□□□□ 0.84
UBE3D-203ENST00000369747 RBM27Q9P2N5 1060 aaKnown RBP20.32■□□□□ 0.84
UBE3D-203ENST00000369747 MBD3O95983 291 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 CTDSPL2Q05D32 466 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 DPY19L2Q6NUT2 758 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 USP48Q86UV5 1035 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 TBC1D10CQ8IV04 446 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 ZFPM1Q8IX07 1006 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 STK11IPQ8N1F8 1099 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 INCENPQ9NQS7 918 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 NAV1Q8NEY1 1877 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 H7C1D1 291 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 TCP10Q12799 353 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 LARP1BQ659C4 914 aaKnown RBP20.31■□□□□ 0.84
UBE3D-203ENST00000369747 PANK2Q9BZ23 570 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 FAM198AQ9UFP1 575 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 CNPY2Q9Y2B0 182 aa20.31■□□□□ 0.84
UBE3D-203ENST00000369747 MMP14P50281 582 aa20.3■□□□□ 0.84
UBE3D-203ENST00000369747 PPARAQ07869 468 aa20.3■□□□□ 0.84
UBE3D-203ENST00000369747 SPDYE2Q495Y8 402 aa20.3■□□□□ 0.84
UBE3D-203ENST00000369747 IDI2Q9BXS1 227 aa20.3■□□□□ 0.84
UBE3D-203ENST00000369747 TMEM63CQ9P1W3 806 aa20.3■□□□□ 0.84
UBE3D-203ENST00000369747 ZNF70Q9UC06 446 aaPredicted RBP20.3■□□□□ 0.84
UBE3D-203ENST00000369747 ATP6V1DQ9Y5K8 247 aa20.3■□□□□ 0.84
UBE3D-203ENST00000369747 TACC3Q9Y6A5 838 aa20.3■□□□□ 0.84
UBE3D-203ENST00000369747 ASTN2O75129 1339 aaPredicted RBP20.3■□□□□ 0.84
UBE3D-203ENST00000369747 ZC3H4Q9UPT8 1303 aaKnown RBP20.3■□□□□ 0.84
UBE3D-203ENST00000369747 DDX60LQ5H9U9 1706 aaKnown RBP20.3■□□□□ 0.84
UBE3D-203ENST00000369747 VPS37CA5D8V6 355 aaPredicted RBP20.29■□□□□ 0.84
UBE3D-203ENST00000369747 GADD45BO75293 160 aaPredicted RBP20.29■□□□□ 0.84
UBE3D-203ENST00000369747 PDIA4P13667 645 aaKnown RBP20.29■□□□□ 0.84
UBE3D-203ENST00000369747 PLCD1P51178 756 aa20.29■□□□□ 0.84
UBE3D-203ENST00000369747 KIF4BQ2VIQ3 1234 aa20.29■□□□□ 0.84
UBE3D-203ENST00000369747 TRPM4Q8TD43 1214 aa20.29■□□□□ 0.84
UBE3D-203ENST00000369747 ARPP21Q9UBL0 812 aaPredicted RBP20.29■□□□□ 0.84
UBE3D-203ENST00000369747 MYH1P12882 1939 aa20.29■□□□□ 0.84
UBE3D-203ENST00000369747 GLTPD2A6NH11 291 aa20.29■□□□□ 0.84
UBE3D-203ENST00000369747 PDCP20941 246 aa20.29■□□□□ 0.84
UBE3D-203ENST00000369747 SCAF8Q9UPN6 1271 aaKnown RBP20.29■□□□□ 0.84
UBE3D-203ENST00000369747 TCP10L2B9ZVM9 353 aa20.28■□□□□ 0.84
UBE3D-203ENST00000369747 PFKFB2O60825 505 aa20.28■□□□□ 0.84
UBE3D-203ENST00000369747 FGD1P98174 961 aa20.28■□□□□ 0.84
UBE3D-203ENST00000369747 SBK1Q52WX2 424 aa20.28■□□□□ 0.84
UBE3D-203ENST00000369747 C12orf60Q5U649 245 aa20.28■□□□□ 0.84
UBE3D-203ENST00000369747 NKX2-3Q8TAU0 364 aa20.28■□□□□ 0.84
UBE3D-203ENST00000369747 OSBPL5Q9H0X9 879 aaPredicted RBP20.28■□□□□ 0.84
UBE3D-203ENST00000369747 VEZTQ9HBM0 779 aa20.28■□□□□ 0.84
UBE3D-203ENST00000369747 MYO1BO43795 1136 aa20.27■□□□□ 0.84
UBE3D-203ENST00000369747 JAK2O60674 1132 aa20.27■□□□□ 0.84
UBE3D-203ENST00000369747 POLR3DP05423 398 aaPredicted RBP20.27■□□□□ 0.84
UBE3D-203ENST00000369747 APOBRQ0VD83 1088 aa20.27■□□□□ 0.84
UBE3D-203ENST00000369747 SCRN1Q12765 414 aa20.27■□□□□ 0.84
UBE3D-203ENST00000369747 CDC37L1Q7L3B6 337 aa20.27■□□□□ 0.84
UBE3D-203ENST00000369747 ANAPC4Q9UJX5 808 aa20.27■□□□□ 0.84
UBE3D-203ENST00000369747 LAMB1P07942 1786 aa20.27■□□□□ 0.84
UBE3D-203ENST00000369747 HIRAP54198 1017 aaPredicted RBP20.27■□□□□ 0.84
UBE3D-203ENST00000369747 NEDD4P46934 1319 aa20.26■□□□□ 0.83
UBE3D-203ENST00000369747 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
UBE3D-203ENST00000369747 LMOD1P29536 600 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms