RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 DHX36Q9H2U1 1008 aaKnown RBP12.96□□□□□ -0.33
BRCC3-204ENST00000369462 ECM29Q5VYK3 1845 aa12.96□□□□□ -0.33
BRCC3-204ENST00000369462 B4E1Z4 1266 aa12.96□□□□□ -0.34
BRCC3-204ENST00000369462 ANGEL2Q5VTE6 544 aaKnown RBP12.96□□□□□ -0.34
BRCC3-204ENST00000369462 RUFY3Q7L099 469 aa12.96□□□□□ -0.34
BRCC3-204ENST00000369462 FAM151AQ8WW52 585 aa12.96□□□□□ -0.34
BRCC3-204ENST00000369462 TMEM39BQ9GZU3 492 aa12.96□□□□□ -0.34
BRCC3-204ENST00000369462 NAV1Q8NEY1 1877 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 HLA-DOAP06340 250 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 PDE4BQ07343 736 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 CHST3Q7LGC8 479 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 SLC44A5Q8NCS7 719 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 NKX2-3Q8TAU0 364 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 FOCADQ5VW36 1801 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 CNTNAP1P78357 1384 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 MYH1P12882 1939 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 HMGB1P09429 215 aaKnown RBP12.95□□□□□ -0.34
BRCC3-204ENST00000369462 EPHX2P34913 555 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 TNFAIP1Q13829 316 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 RASA3Q14644 834 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 FAM83AQ86UY5 434 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 CNNM2Q9H8M5 875 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 GGA3Q9NZ52 723 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 SERPINB13Q9UIV8 391 aa12.95□□□□□ -0.34
BRCC3-204ENST00000369462 IQCA1LA6NCM1 817 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 POTECB2RU33 542 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 KDM4AO75164 1064 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 SLURP2P0DP57 97 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 RPS6KB1P23443 525 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 TNNI2P48788 182 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 DHX32Q7L7V1 743 aaKnown RBP12.94□□□□□ -0.34
BRCC3-204ENST00000369462 CSRNP1Q96S65 589 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 MKNK2Q9HBH9 465 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 PI4KBQ9UBF8 816 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 LAMA4Q16363 1823 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 ST18O60284 1047 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
BRCC3-204ENST00000369462 FGRP09769 529 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 MB21D2Q8IYB1 491 aaPredicted RBP12.94□□□□□ -0.34
BRCC3-204ENST00000369462 LRRC2Q9BYS8 371 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 KRT23Q9C075 422 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 DEFB129Q9H1M3 183 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
BRCC3-204ENST00000369462 ROBO3Q96MS0 1386 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 CD2BP2O95400 341 aaKnown RBP12.94□□□□□ -0.34
BRCC3-204ENST00000369462 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
BRCC3-204ENST00000369462 MCM5P33992 734 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 CDK8P49336 464 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 C16orf86Q6ZW13 317 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 CRACR2BQ8N4Y2 399 aaPredicted RBP12.94□□□□□ -0.34
BRCC3-204ENST00000369462 TAF1DQ9H5J8 278 aaPredicted RBP12.94□□□□□ -0.34
BRCC3-204ENST00000369462 PDRG1Q9NUG6 133 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
BRCC3-204ENST00000369462 ATRNL1Q5VV63 1379 aa12.93□□□□□ -0.34
BRCC3-204ENST00000369462 GABPAQ06546 454 aa12.93□□□□□ -0.34
BRCC3-204ENST00000369462 USP50Q70EL3 339 aaPredicted RBP12.93□□□□□ -0.34
BRCC3-204ENST00000369462 ESR2Q92731 530 aa12.93□□□□□ -0.34
BRCC3-204ENST00000369462 ZNF287Q9HBT7 754 aa12.93□□□□□ -0.34
BRCC3-204ENST00000369462 DDX60LQ5H9U9 1706 aaKnown RBP12.93□□□□□ -0.34
BRCC3-204ENST00000369462 FAM196BA6NMK8 535 aa12.93□□□□□ -0.34
BRCC3-204ENST00000369462 ORC4O43929 436 aa12.93□□□□□ -0.34
BRCC3-204ENST00000369462 EAPPQ56P03 285 aaPredicted RBP12.93□□□□□ -0.34
BRCC3-204ENST00000369462 CYB5R4Q7L1T6 521 aa12.93□□□□□ -0.34
BRCC3-204ENST00000369462 APOBEC3FQ8IUX4 373 aaKnown RBP12.93□□□□□ -0.34
BRCC3-204ENST00000369462 TTC14Q96N46 770 aa12.93□□□□□ -0.34
BRCC3-204ENST00000369462 PRC1O43663 620 aa12.92□□□□□ -0.34
BRCC3-204ENST00000369462 ANTXR2P58335 489 aa12.92□□□□□ -0.34
BRCC3-204ENST00000369462 FGD1P98174 961 aa12.92□□□□□ -0.34
BRCC3-204ENST00000369462 EXOSC10Q01780 885 aaKnown RBP12.92□□□□□ -0.34
BRCC3-204ENST00000369462 FAM47AQ5JRC9 791 aa12.92□□□□□ -0.34
BRCC3-204ENST00000369462 NOL8Q76FK4 1167 aaKnown RBP12.92□□□□□ -0.34
BRCC3-204ENST00000369462 FOXP4Q8IVH2 680 aaPredicted RBP12.92□□□□□ -0.34
BRCC3-204ENST00000369462 ZNF444Q8N0Y2 327 aaPredicted RBP12.92□□□□□ -0.34
BRCC3-204ENST00000369462 TRIM34Q9BYJ4 488 aa12.92□□□□□ -0.34
BRCC3-204ENST00000369462 EHD4Q9H223 541 aa12.92□□□□□ -0.34
BRCC3-204ENST00000369462 ZNF526Q8TF50 670 aaPredicted RBP12.92□□□□□ -0.34
BRCC3-204ENST00000369462 LARP6Q9BRS8 491 aaKnown RBP12.92□□□□□ -0.34
BRCC3-204ENST00000369462 DNAJC18Q9H819 358 aa12.92□□□□□ -0.34
BRCC3-204ENST00000369462 LAMB1P07942 1786 aa12.92□□□□□ -0.34
BRCC3-204ENST00000369462 RASA1P20936 1047 aa12.91□□□□□ -0.34
BRCC3-204ENST00000369462 AK2P54819 239 aa12.91□□□□□ -0.34
BRCC3-204ENST00000369462 DCPSQ96C86 337 aaKnown RBP12.91□□□□□ -0.34
BRCC3-204ENST00000369462 ZKSCAN3Q9BRR0 538 aa12.91□□□□□ -0.34
BRCC3-204ENST00000369462 RRAGCQ9HB90 399 aa12.91□□□□□ -0.34
BRCC3-204ENST00000369462 COL2A1P02458 1487 aaPredicted RBP12.91□□□□□ -0.34
BRCC3-204ENST00000369462 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
BRCC3-204ENST00000369462 VEGFAP15692 232 aaPredicted RBP12.91□□□□□ -0.34
BRCC3-204ENST00000369462 PRAMEF18Q5VWM3 479 aa12.91□□□□□ -0.34
BRCC3-204ENST00000369462 Q6ZUG5 572 aa12.91□□□□□ -0.34
BRCC3-204ENST00000369462 PNMA8AQ86V59 439 aaPredicted RBP12.91□□□□□ -0.34
BRCC3-204ENST00000369462 TEPSINQ96N21 525 aa12.91□□□□□ -0.34
BRCC3-204ENST00000369462 GPHNQ9NQX3 736 aaPredicted RBP12.91□□□□□ -0.34
BRCC3-204ENST00000369462 SWAP70Q9UH65 585 aa12.91□□□□□ -0.34
BRCC3-204ENST00000369462 PGAP2Q9UHJ9 254 aa12.91□□□□□ -0.34
BRCC3-204ENST00000369462 SHMT1P34896 483 aa12.9□□□□□ -0.34
BRCC3-204ENST00000369462 TFAP4Q01664 338 aa12.9□□□□□ -0.34
BRCC3-204ENST00000369462 MIGA2Q7L4E1 593 aa12.9□□□□□ -0.34
BRCC3-204ENST00000369462 METTL16Q86W50 562 aaKnown RBP12.9□□□□□ -0.34
BRCC3-204ENST00000369462 SULF1Q8IWU6 871 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms