RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 SUGT1Q9Y2Z0 365 aa16.58■□□□□ 0.24
HMGCS2-201ENST00000369406 ROBO3Q96MS0 1386 aa16.58■□□□□ 0.24
HMGCS2-201ENST00000369406 ARFGEF1Q9Y6D6 1849 aa16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 USP17L3A6NCW0 530 aa16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 USP17L4A6NCW7 530 aa16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 WDHD1O75717 1129 aaPredicted RBP16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 SLURP2P0DP57 97 aa16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 ZSCAN22P10073 491 aaPredicted RBP16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 FOSBP53539 338 aa16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 USP17L1Q7RTZ2 530 aa16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 SGMS1Q86VZ5 419 aa16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 TMEM87BQ96K49 555 aa16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 RANBP6O60518 1105 aaKnown RBP16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 CRKP46108 304 aa16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 RTKN2Q8IZC4 609 aa16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 NOL10Q9BSC4 688 aaKnown RBP16.57■□□□□ 0.24
HMGCS2-201ENST00000369406 TNKSO95271 1327 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 UBE2Q2LH0YL09 131 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 ORC4O43929 436 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 ADD1P35611 737 aaKnown RBP16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 MCTP1Q6DN14 999 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 CDC42EP5Q6NZY7 148 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 MICU3Q86XE3 530 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 ENAHQ8N8S7 591 aaPredicted RBP16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 BAZ2BQ9UIF8 2168 aaKnown RBP16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 WDR33Q9C0J8 1336 aaKnown RBP16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 RAD17O75943 681 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 PRELPP51888 382 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 CACNB3P54284 484 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 NFIAQ12857 509 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 PICALMQ13492 652 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 DALRD3Q5D0E6 543 aaKnown RBP16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 LARP1BQ659C4 914 aaKnown RBP16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 SUPT20HQ8NEM7 779 aa16.56■□□□□ 0.24
HMGCS2-201ENST00000369406 VPS37CA5D8V6 355 aaPredicted RBP16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 NFKBIEO00221 500 aa16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 LIFRP42702 1097 aa16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 ZFPM1Q8IX07 1006 aa16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 ESR2Q92731 530 aa16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 F13A1P00488 732 aa16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 HHIPL2Q6UWX4 724 aa16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 FERMT3Q86UX7 667 aa16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 LARGE2Q8N3Y3 721 aa16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 GBP4Q96PP9 640 aa16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 LLPHQ9BRT6 129 aaKnown RBP16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 USP40Q9NVE5 1235 aa16.55■□□□□ 0.24
HMGCS2-201ENST00000369406 FKBP1AP62942 108 aaKnown RBP16.54■□□□□ 0.24
HMGCS2-201ENST00000369406 NFXL1Q6ZNB6 911 aa16.54■□□□□ 0.24
HMGCS2-201ENST00000369406 SLF2Q8IX21 1173 aa16.54■□□□□ 0.24
HMGCS2-201ENST00000369406 TEKT1Q969V4 418 aa16.54■□□□□ 0.24
HMGCS2-201ENST00000369406 ZSCAN10Q96SZ4 725 aaPredicted RBP16.54■□□□□ 0.24
HMGCS2-201ENST00000369406 GJB4Q9NTQ9 266 aa16.54■□□□□ 0.24
HMGCS2-201ENST00000369406 PSMD14O00487 310 aa16.54■□□□□ 0.24
HMGCS2-201ENST00000369406 WTAPQ15007 396 aa16.54■□□□□ 0.24
HMGCS2-201ENST00000369406 FAM173BQ6P4H8 233 aa16.54■□□□□ 0.24
HMGCS2-201ENST00000369406 IL17RBQ9NRM6 502 aa16.54■□□□□ 0.24
HMGCS2-201ENST00000369406 ZBTB43O43298 467 aa16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 METAP2P50579 478 aaKnown RBP eCLIP16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 NTRK3Q16288 839 aa16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 ZDHHC15Q96MV8 337 aa16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 GDPD2Q9HCC8 539 aa16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 ZBTB12Q9Y330 459 aaPredicted RBP16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 POLR3DP05423 398 aaPredicted RBP16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 PLCG2P16885 1265 aa16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 RCSD1Q6JBY9 416 aa16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 CMTR1Q8N1G2 835 aaKnown RBP16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 AIFM3Q96NN9 605 aa16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 CD2APQ9Y5K6 639 aa16.53■□□□□ 0.24
HMGCS2-201ENST00000369406 NID2Q14112 1375 aa16.52■□□□□ 0.24
HMGCS2-201ENST00000369406 RASA1P20936 1047 aa16.52■□□□□ 0.24
HMGCS2-201ENST00000369406 OTUD7BQ6GQQ9 843 aa16.52■□□□□ 0.24
HMGCS2-201ENST00000369406 PHKBQ93100 1093 aa16.52■□□□□ 0.24
HMGCS2-201ENST00000369406 UBAC1Q9BSL1 405 aa16.52■□□□□ 0.24
HMGCS2-201ENST00000369406 LMBRD1Q9NUN5 540 aa16.52■□□□□ 0.24
HMGCS2-201ENST00000369406 SLC12A7Q9Y666 1083 aa16.52■□□□□ 0.24
HMGCS2-201ENST00000369406 GOLGA8AA7E2F4 631 aa16.51■□□□□ 0.23
HMGCS2-201ENST00000369406 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
HMGCS2-201ENST00000369406 RASSF7Q02833 373 aa16.51■□□□□ 0.23
HMGCS2-201ENST00000369406 ZNF654Q8IZM8 581 aa16.51■□□□□ 0.23
HMGCS2-201ENST00000369406 GMLQ99445 158 aa16.51■□□□□ 0.23
HMGCS2-201ENST00000369406 BCS1LQ9Y276 419 aa16.51■□□□□ 0.23
HMGCS2-201ENST00000369406 GREB1LQ9C091 1923 aaPredicted RBP16.51■□□□□ 0.23
HMGCS2-201ENST00000369406 CCDC69A6NI79 296 aa16.51■□□□□ 0.23
HMGCS2-201ENST00000369406 GUCY1B3Q02153 619 aa16.51■□□□□ 0.23
HMGCS2-201ENST00000369406 CNPY2Q9Y2B0 182 aa16.51■□□□□ 0.23
HMGCS2-201ENST00000369406 SHTN1A0MZ66 631 aa16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 DDX11L8A8MPP1 907 aa16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 PCP11498 1178 aaKnown RBP16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 CDK8P49336 464 aa16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 TFAP4Q01664 338 aa16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 PDE4BQ07343 736 aa16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 FAM198AQ9UFP1 575 aa16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 VIL1P09327 827 aaKnown RBP16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 RSBN1LQ6PCB5 846 aaPredicted RBP16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 CERS3Q8IU89 383 aa16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 PRMT6Q96LA8 375 aaPredicted RBP16.5■□□□□ 0.23
HMGCS2-201ENST00000369406 TRAK2O60296 914 aa16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 RBM5P52756 815 aaKnown RBP eCLIP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms