RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 EYA1Q99502 592 aa20.27■□□□□ 0.84
SNX27-202ENST00000368841 METTL13Q8N6R0 699 aa20.27■□□□□ 0.84
SNX27-202ENST00000368841 RPL13P26373 211 aaKnown RBP20.27■□□□□ 0.83
SNX27-202ENST00000368841 TRMT44Q8IYL2 757 aaKnown RBP20.26■□□□□ 0.83
SNX27-202ENST00000368841 STMN2Q93045 179 aa20.26■□□□□ 0.83
SNX27-202ENST00000368841 GDAP1L1Q96MZ0 367 aa20.26■□□□□ 0.83
SNX27-202ENST00000368841 GGA1Q9UJY5 639 aa20.26■□□□□ 0.83
SNX27-202ENST00000368841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.26■□□□□ 0.83
SNX27-202ENST00000368841 CAVIN2O95810 425 aa20.26■□□□□ 0.83
SNX27-202ENST00000368841 MRPL44Q9H9J2 332 aaKnown RBP20.26■□□□□ 0.83
SNX27-202ENST00000368841 TTC41PQ6P2S7 1318 aa20.26■□□□□ 0.83
SNX27-202ENST00000368841 NKIRAS1Q9NYS0 192 aa20.26■□□□□ 0.83
SNX27-202ENST00000368841 NSMFQ6X4W1 530 aa20.26■□□□□ 0.83
SNX27-202ENST00000368841 CSGALNACT2Q8N6G5 542 aa20.26■□□□□ 0.83
SNX27-202ENST00000368841 DBNDD2Q9BQY9 259 aa20.26■□□□□ 0.83
SNX27-202ENST00000368841 PAGR1Q9BTK6 254 aa20.26■□□□□ 0.83
SNX27-202ENST00000368841 SLC8A3P57103 927 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.25■□□□□ 0.83
SNX27-202ENST00000368841 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.25■□□□□ 0.83
SNX27-202ENST00000368841 HOXC9P31274 260 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 BRAPQ7Z569 592 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 KIAA1524Q8TCG1 905 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 EBAG9O00559 213 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 A1BGP04217 495 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 TNNI3KQ59H18 835 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 CCDC26Q8TAB7 109 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 FPGT-TNNI3KV9GXZ4 949 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 CAPN12Q6ZSI9 719 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 PCDH11XQ9BZA7 1347 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 PCDH11YQ9BZA8 1340 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 CLUL1Q15846 466 aa20.25■□□□□ 0.83
SNX27-202ENST00000368841 TTC6Q86TZ1 520 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 SNX29Q8TEQ0 813 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 MED10Q9BTT4 135 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 SEPT10Q9P0V9 454 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 MYL5Q02045 173 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 SESTD1Q86VW0 696 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 LARGE2Q8N3Y3 721 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 ARHGEF2Q92974 986 aaKnown RBP20.24■□□□□ 0.83
SNX27-202ENST00000368841 KDM5BQ9UGL1 1544 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 C8orf74Q6P047 294 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 LINS1Q8NG48 757 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 TBC1D31Q96DN5 1066 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 HINFPQ9BQA5 517 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 COBLO75128 1261 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 PRPF6O94906 941 aaKnown RBP20.24■□□□□ 0.83
SNX27-202ENST00000368841 CCDC170Q8IYT3 715 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 ASIC3Q9UHC3 531 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 ZKSCAN5Q9Y2L8 839 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 NPATQ14207 1427 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 RIMS2Q9UQ26 1411 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
SNX27-202ENST00000368841 CUL4BQ13620 913 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 DPP8Q6V1X1 898 aaPredicted RBP20.23■□□□□ 0.83
SNX27-202ENST00000368841 TPH2Q8IWU9 490 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 FAM47CQ5HY64 1035 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 CNNM4Q6P4Q7 775 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 CTTNBP2NLQ9P2B4 639 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 GPAA1O43292 621 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 PUM3Q15397 648 aaKnown RBP20.23■□□□□ 0.83
SNX27-202ENST00000368841 DIXDC1Q155Q3 683 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 LIN9Q5TKA1 542 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 USP26Q9BXU7 913 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 HELLSQ9NRZ9 838 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 KCNH3Q9ULD8 1083 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 IVNS1ABPQ9Y6Y0 642 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 CD19P15391 556 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 ALDH3A1P30838 453 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 KMT5BQ4FZB7 885 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 TBC1D10BQ4KMP7 808 aaPredicted RBP20.23■□□□□ 0.83
SNX27-202ENST00000368841 CALCRLQ16602 461 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 HDXQ7Z353 690 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 C4orf50Q6ZRC1 276 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 LRRC43Q8N309 656 aa20.23■□□□□ 0.83
SNX27-202ENST00000368841 MKRN1Q9UHC7 482 aaKnown RBP20.23■□□□□ 0.83
SNX27-202ENST00000368841 LMTK3Q96Q04 1460 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 TBC1D8O95759 1140 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 TTC38Q5R3I4 469 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 FAM102BQ5T8I3 360 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 ZNF365Q70YC5 407 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 ARHGAP45Q92619 1136 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 VPS54Q9P1Q0 977 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 THOC2Q8NI27 1593 aaKnown RBP20.22■□□□□ 0.83
SNX27-202ENST00000368841 CEP104O60308 925 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 PNOCQ13519 176 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 DCUN1D2Q6PH85 259 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 NAPGQ99747 312 aaPredicted RBP20.22■□□□□ 0.83
SNX27-202ENST00000368841 KIAA0586Q9BVV6 1533 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 ANO1Q5XXA6 986 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 CNGA4Q8IV77 575 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 VAMP4O75379 141 aa20.22■□□□□ 0.83
SNX27-202ENST00000368841 GPR161Q8N6U8 529 aaKnown RBP20.22■□□□□ 0.83
SNX27-202ENST00000368841 SYNJ2BP-COX16A0A087WUM0 186 aa20.21■□□□□ 0.83
SNX27-202ENST00000368841 PAK1Q13153 545 aa20.21■□□□□ 0.83
SNX27-202ENST00000368841 LGR6Q9HBX8 967 aa20.21■□□□□ 0.83
SNX27-202ENST00000368841 COX16Q9P0S2 106 aa20.21■□□□□ 0.83
SNX27-202ENST00000368841 GADD45BO75293 160 aaPredicted RBP20.21■□□□□ 0.83
SNX27-202ENST00000368841 CYP26C1Q6V0L0 522 aa20.21■□□□□ 0.83
SNX27-202ENST00000368841 NELFBQ8WX92 580 aa20.21■□□□□ 0.83
SNX27-202ENST00000368841 RBSNQ9H1K0 784 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms