RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 MGAMO43451 1857 aa10.57□□□□□ -0.72
SNX27-201ENST00000368838 MYO5AQ9Y4I1 1855 aaKnown RBP10.57□□□□□ -0.72
SNX27-201ENST00000368838 ZFYP08048 801 aaPredicted RBP10.57□□□□□ -0.72
SNX27-201ENST00000368838 FBXO33Q7Z6M2 555 aa10.57□□□□□ -0.72
SNX27-201ENST00000368838 SNX21Q969T3 373 aa10.57□□□□□ -0.72
SNX27-201ENST00000368838 OPTNQ96CV9 577 aa10.57□□□□□ -0.72
SNX27-201ENST00000368838 XAGE2Q96GT9 111 aa10.57□□□□□ -0.72
SNX27-201ENST00000368838 TEPSINQ96N21 525 aa10.57□□□□□ -0.72
SNX27-201ENST00000368838 TLR7Q9NYK1 1049 aaKnown RBP10.57□□□□□ -0.72
SNX27-201ENST00000368838 TRIM17Q9Y577 477 aa10.57□□□□□ -0.72
SNX27-201ENST00000368838 HTTP42858 3142 aa10.56□□□□□ -0.72
SNX27-201ENST00000368838 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
SNX27-201ENST00000368838 ZBTB48P10074 688 aaPredicted RBP10.56□□□□□ -0.72
SNX27-201ENST00000368838 CAP1Q01518 475 aa10.56□□□□□ -0.72
SNX27-201ENST00000368838 CRHR2Q13324 411 aa10.56□□□□□ -0.72
SNX27-201ENST00000368838 CAVIN4Q5BKX8 364 aa10.56□□□□□ -0.72
SNX27-201ENST00000368838 SMYD5Q6GMV2 418 aa10.56□□□□□ -0.72
SNX27-201ENST00000368838 FBXO46Q6PJ61 603 aaPredicted RBP10.56□□□□□ -0.72
SNX27-201ENST00000368838 ANKRD13AQ8IZ07 590 aa10.56□□□□□ -0.72
SNX27-201ENST00000368838 CD99L2Q8TCZ2 262 aa10.56□□□□□ -0.72
SNX27-201ENST00000368838 KCNB2Q92953 911 aa10.56□□□□□ -0.72
SNX27-201ENST00000368838 PTPN18Q99952 460 aa10.56□□□□□ -0.72
SNX27-201ENST00000368838 SERPINA10Q9UK55 444 aa10.56□□□□□ -0.72
SNX27-201ENST00000368838 PTPRFP10586 1907 aa10.55□□□□□ -0.72
SNX27-201ENST00000368838 IFIT1P09914 478 aaKnown RBP10.55□□□□□ -0.72
SNX27-201ENST00000368838 TIMM10P62072 90 aa10.55□□□□□ -0.72
SNX27-201ENST00000368838 TNFAIP1Q13829 316 aa10.55□□□□□ -0.72
SNX27-201ENST00000368838 VGLL4Q14135 290 aa10.55□□□□□ -0.72
SNX27-201ENST00000368838 TTF1Q15361 905 aaPredicted RBP10.55□□□□□ -0.72
SNX27-201ENST00000368838 PKN2Q16513 984 aaKnown RBP10.55□□□□□ -0.72
SNX27-201ENST00000368838 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.55□□□□□ -0.72
SNX27-201ENST00000368838 PIP4P2Q8N4L2 257 aa10.55□□□□□ -0.72
SNX27-201ENST00000368838 OTUD5Q96G74 571 aa10.55□□□□□ -0.72
SNX27-201ENST00000368838 TRPC6Q9Y210 931 aa10.55□□□□□ -0.72
SNX27-201ENST00000368838 ATAD5Q96QE3 1844 aa10.54□□□□□ -0.72
SNX27-201ENST00000368838 ALDH1A1P00352 501 aa10.54□□□□□ -0.72
SNX27-201ENST00000368838 SLC5A1P13866 664 aa10.54□□□□□ -0.72
SNX27-201ENST00000368838 TSGA10IPQ3SY00 556 aa10.54□□□□□ -0.72
SNX27-201ENST00000368838 OTOP1Q7RTM1 612 aa10.54□□□□□ -0.72
SNX27-201ENST00000368838 TEKT1Q969V4 418 aa10.54□□□□□ -0.72
SNX27-201ENST00000368838 RILPL2Q969X0 211 aa10.54□□□□□ -0.72
SNX27-201ENST00000368838 PHF12Q96QT6 1004 aa10.54□□□□□ -0.72
SNX27-201ENST00000368838 KIF2CQ99661 725 aa10.54□□□□□ -0.72
SNX27-201ENST00000368838 CFHR5Q9BXR6 569 aa10.54□□□□□ -0.72
SNX27-201ENST00000368838 HELLSQ9NRZ9 838 aa10.54□□□□□ -0.72
SNX27-201ENST00000368838 DOCK3Q8IZD9 2030 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 PHIPQ8WWQ0 1821 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 CCL15-CCL14A0A0B4J2E2 113 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 POTEFA5A3E0 1075 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 SLC34A2O95436 690 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 HSPA4P34932 840 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 TNNI2P48788 182 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 MFAP1P55081 439 aaKnown RBP10.53□□□□□ -0.72
SNX27-201ENST00000368838 INHBEP58166 350 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 MAP3K9P80192 1104 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 RABEP1Q15276 862 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 DIXDC1Q155Q3 683 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 CCL15Q16663 113 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 NOM1Q5C9Z4 860 aaKnown RBP10.53□□□□□ -0.72
SNX27-201ENST00000368838 TSHZ3Q63HK5 1081 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 MIGA2Q7L4E1 593 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 TBC1D22AQ8WUA7 517 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 BRI3BPQ8WY22 251 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 ZKSCAN4Q969J2 545 aaPredicted RBP10.53□□□□□ -0.72
SNX27-201ENST00000368838 NEUROD6Q96NK8 337 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 BOLA2Q9H3K6 86 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 DIAPH3Q9NSV4 1193 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 PAG1Q9NWQ8 432 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 CSADQ9Y600 493 aa10.53□□□□□ -0.72
SNX27-201ENST00000368838 MYCP01106 439 aaPredicted RBP10.52□□□□□ -0.73
SNX27-201ENST00000368838 MCCP23508 829 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 TCP10Q12799 353 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 BECN1Q14457 450 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 UBE3CQ15386 1083 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 CCDC102BQ68D86 513 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 OTUD7BQ6GQQ9 843 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 ZSCAN25Q6NSZ9 544 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 APOBEC3HQ6NTF7 200 aaKnown RBP10.52□□□□□ -0.73
SNX27-201ENST00000368838 FAM43AQ8N2R8 423 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.52□□□□□ -0.73
SNX27-201ENST00000368838 MAP4K1Q92918 833 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 WRNIP1Q96S55 665 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 TM6SF1Q9BZW5 370 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 LSG1Q9H089 658 aaKnown RBP10.52□□□□□ -0.73
SNX27-201ENST00000368838 TMOD2Q9NZR1 351 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 DOCK1Q14185 1865 aa10.52□□□□□ -0.73
SNX27-201ENST00000368838 ADORA1P30542 326 aa10.51□□□□□ -0.73
SNX27-201ENST00000368838 SP3Q02447 781 aa10.51□□□□□ -0.73
SNX27-201ENST00000368838 TAF1CQ15572 869 aaPredicted RBP10.51□□□□□ -0.73
SNX27-201ENST00000368838 TTC39AQ5SRH9 613 aa10.51□□□□□ -0.73
SNX27-201ENST00000368838 ZMYM1Q5SVZ6 1142 aa10.51□□□□□ -0.73
SNX27-201ENST00000368838 GORABQ5T7V8 394 aa10.51□□□□□ -0.73
SNX27-201ENST00000368838 ERO1AQ96HE7 468 aa10.51□□□□□ -0.73
SNX27-201ENST00000368838 ZDHHC15Q96MV8 337 aa10.51□□□□□ -0.73
SNX27-201ENST00000368838 FSD1Q9BTV5 496 aa10.51□□□□□ -0.73
SNX27-201ENST00000368838 GNL3LQ9NVN8 582 aaKnown RBP10.51□□□□□ -0.73
SNX27-201ENST00000368838 PTPN22Q9Y2R2 807 aa10.51□□□□□ -0.73
SNX27-201ENST00000368838 SNCAIPQ9Y6H5 919 aa10.51□□□□□ -0.73
SNX27-201ENST00000368838 BRCA2P51587 3418 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms