RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 ASIC1P78348 528 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 IFT88Q13099 833 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 MTMR3Q13615 1198 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 RILPL1Q5EBL4 403 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 AEBP2Q6ZN18 517 aaPredicted RBP13.71□□□□□ -0.21
SHPRH-202ENST00000367503 VAT1LQ9HCJ6 419 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 YTHDC2Q9H6S0 1430 aaKnown RBP13.71□□□□□ -0.21
SHPRH-202ENST00000367503 STX10O60499 249 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 CEBPAP49715 358 aaPredicted RBP13.71□□□□□ -0.21
SHPRH-202ENST00000367503 SH2D4BQ5SQS7 431 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 SUDS3Q9H7L9 328 aaPredicted RBP13.71□□□□□ -0.21
SHPRH-202ENST00000367503 STK38LQ9Y2H1 464 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 ANKRD65E5RJM6 399 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 CLTAP09496 248 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 ARID5AQ03989 594 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 CUL4AQ13619 759 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 CROCCP2Q86T23 111 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 ABCC10Q5T3U5 1492 aa13.71□□□□□ -0.21
SHPRH-202ENST00000367503 KIAA0232Q92628 1395 aa13.71□□□□□ -0.22
SHPRH-202ENST00000367503 ERCC3P19447 782 aa13.71□□□□□ -0.22
SHPRH-202ENST00000367503 CEP128Q6ZU80 1094 aa13.71□□□□□ -0.22
SHPRH-202ENST00000367503 ERMNQ8TAM6 284 aa13.71□□□□□ -0.22
SHPRH-202ENST00000367503 CIB2O75838 187 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 PPP1R14CQ8TAE6 165 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 CLEC17AQ6ZS10 378 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 TPX2Q9ULW0 747 aaKnown RBP13.7□□□□□ -0.22
SHPRH-202ENST00000367503 CUTAO60888 179 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 KRT2P35908 639 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 CFAP221Q4G0U5 840 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 ADALQ6DHV7 355 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 RPUSD2Q8IZ73 545 aaKnown RBP13.7□□□□□ -0.22
SHPRH-202ENST00000367503 NOX5Q96PH1 765 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 IQCGQ9H095 443 aaKnown RBP13.7□□□□□ -0.22
SHPRH-202ENST00000367503 FAM114A2Q9NRY5 505 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
SHPRH-202ENST00000367503 CHUKO15111 745 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 JAK2O60674 1132 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 APBA1Q02410 837 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 MUM1Q2TAK8 710 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 SRLQ86TD4 932 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 TRIM6Q9C030 488 aaPredicted RBP13.7□□□□□ -0.22
SHPRH-202ENST00000367503 SLC24A3Q9HC58 644 aa13.7□□□□□ -0.22
SHPRH-202ENST00000367503 NUTM2BA6NNL0 878 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-202ENST00000367503 NUTM2EB1AL46 878 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-202ENST00000367503 GSTO1P78417 241 aa13.69□□□□□ -0.22
SHPRH-202ENST00000367503 ZCRB1Q8TBF4 217 aaKnown RBP13.69□□□□□ -0.22
SHPRH-202ENST00000367503 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
SHPRH-202ENST00000367503 TBC1D8BQ0IIM8 1120 aa13.69□□□□□ -0.22
SHPRH-202ENST00000367503 KRT71Q3SY84 523 aa13.69□□□□□ -0.22
SHPRH-202ENST00000367503 TAOK1Q7L7X3 1001 aa13.69□□□□□ -0.22
SHPRH-202ENST00000367503 HGSO14964 777 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-202ENST00000367503 CETN3O15182 167 aa13.69□□□□□ -0.22
SHPRH-202ENST00000367503 TBCAO75347 108 aaKnown RBP13.69□□□□□ -0.22
SHPRH-202ENST00000367503 SEPT14Q6ZU15 432 aa13.69□□□□□ -0.22
SHPRH-202ENST00000367503 TMEM87BQ96K49 555 aa13.69□□□□□ -0.22
SHPRH-202ENST00000367503 SF3A3Q12874 501 aaKnown RBP eCLIP13.69□□□□□ -0.22
SHPRH-202ENST00000367503 CASP8Q14790 479 aa13.69□□□□□ -0.22
SHPRH-202ENST00000367503 CC2D1AQ6P1N0 951 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-202ENST00000367503 ARHGEF2Q92974 986 aaKnown RBP13.69□□□□□ -0.22
SHPRH-202ENST00000367503 TSKSQ9UJT2 592 aa13.69□□□□□ -0.22
SHPRH-202ENST00000367503 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-202ENST00000367503 CTNNA2P26232 953 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 RNASE9P60153 205 aaKnown RBP13.68□□□□□ -0.22
SHPRH-202ENST00000367503 CALCOCO2Q13137 446 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 UTP11Q9Y3A2 253 aaKnown RBP13.68□□□□□ -0.22
SHPRH-202ENST00000367503 PPP1R2P41236 205 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 MAP7Q14244 749 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 CCDC63Q8NA47 563 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 RAB3IPQ96QF0 476 aaPredicted RBP13.68□□□□□ -0.22
SHPRH-202ENST00000367503 NUP58Q9BVL2 599 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 RNMTO43148 476 aaKnown RBP13.68□□□□□ -0.22
SHPRH-202ENST00000367503 CCDC174Q6PII3 467 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 STAG1Q8WVM7 1258 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 TBC1D5Q92609 795 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 PSMB7Q99436 277 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 PLCB1Q9NQ66 1216 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 HOXC9P31274 260 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 RBM6P78332 1123 aaKnown RBP13.68□□□□□ -0.22
SHPRH-202ENST00000367503 BIRC2Q13490 618 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 C11orf57Q6ZUT1 292 aaPredicted RBP13.68□□□□□ -0.22
SHPRH-202ENST00000367503 TRMT44Q8IYL2 757 aaKnown RBP13.68□□□□□ -0.22
SHPRH-202ENST00000367503 CXorf56Q9H5V9 222 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 ACTR5Q9H9F9 607 aaPredicted RBP13.68□□□□□ -0.22
SHPRH-202ENST00000367503 SUFUQ9UMX1 484 aa13.68□□□□□ -0.22
SHPRH-202ENST00000367503 GUCY2FP51841 1108 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 POSTNQ15063 836 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 TNNI3KQ59H18 835 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 NFATC2IPQ8NCF5 419 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 IP6K1Q92551 441 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 VCX3BQ9H321 246 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.67□□□□□ -0.22
SHPRH-202ENST00000367503 FPGT-TNNI3KV9GXZ4 949 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 ZNF521Q96K83 1311 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 POLR2DO15514 142 aaKnown RBP13.67□□□□□ -0.22
SHPRH-202ENST00000367503 TSPY3P0CV98 308 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 TSPY8P0CW00 308 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 KLHL7Q8IXQ5 586 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 MCUR1Q96AQ8 359 aa13.67□□□□□ -0.22
SHPRH-202ENST00000367503 ACTN4O43707 911 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms