RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 BRCA2P51587 3418 aa18.14■□□□□ 0.49
CTSD-202ENST00000367196 CYP2C8P10632 490 aa18.14■□□□□ 0.49
CTSD-202ENST00000367196 RLBP1P12271 317 aa18.14■□□□□ 0.49
CTSD-202ENST00000367196 HSP90AB4PQ58FF6 505 aa18.14■□□□□ 0.49
CTSD-202ENST00000367196 PROCA1Q8NCQ7 364 aaPredicted RBP18.14■□□□□ 0.49
CTSD-202ENST00000367196 SH3RF3Q8TEJ3 882 aaPredicted RBP18.14■□□□□ 0.49
CTSD-202ENST00000367196 TRIM47Q96LD4 638 aa18.14■□□□□ 0.49
CTSD-202ENST00000367196 AS3MTQ9HBK9 375 aa18.14■□□□□ 0.49
CTSD-202ENST00000367196 AATFQ9NY61 560 aaKnown RBP eCLIP18.14■□□□□ 0.49
CTSD-202ENST00000367196 PI4KBQ9UBF8 816 aa18.14■□□□□ 0.49
CTSD-202ENST00000367196 AGTPBP1Q9UPW5 1226 aa18.14■□□□□ 0.49
CTSD-202ENST00000367196 MYPNQ86TC9 1320 aa18.14■□□□□ 0.49
CTSD-202ENST00000367196 FOCADQ5VW36 1801 aa18.14■□□□□ 0.49
CTSD-202ENST00000367196 MGAMO43451 1857 aa18.14■□□□□ 0.49
CTSD-202ENST00000367196 BCRP11274 1271 aa18.13■□□□□ 0.49
CTSD-202ENST00000367196 EN2P19622 333 aaPredicted RBP18.13■□□□□ 0.49
CTSD-202ENST00000367196 OSBPP22059 807 aa18.13■□□□□ 0.49
CTSD-202ENST00000367196 PPP4CP60510 307 aa18.13■□□□□ 0.49
CTSD-202ENST00000367196 PABPC4Q13310 644 aaKnown RBP eCLIP18.13■□□□□ 0.49
CTSD-202ENST00000367196 TMED8Q6PL24 325 aaPredicted RBP18.13■□□□□ 0.49
CTSD-202ENST00000367196 SH3TC2Q8TF17 1288 aa18.13■□□□□ 0.49
CTSD-202ENST00000367196 TRIM34Q9BYJ4 488 aa18.13■□□□□ 0.49
CTSD-202ENST00000367196 DBNLQ9UJU6 430 aaKnown RBP18.13■□□□□ 0.49
CTSD-202ENST00000367196 CYP2E1P05181 493 aaPredicted RBP18.12■□□□□ 0.49
CTSD-202ENST00000367196 CAP2P40123 477 aa18.12■□□□□ 0.49
CTSD-202ENST00000367196 CEP85Q6P2H3 762 aa18.12■□□□□ 0.49
CTSD-202ENST00000367196 LOC285556D6RIA3 1793 aa18.12■□□□□ 0.49
CTSD-202ENST00000367196 GRK4P32298 578 aa18.11■□□□□ 0.49
CTSD-202ENST00000367196 ZNF280CQ8ND82 737 aa18.11■□□□□ 0.49
CTSD-202ENST00000367196 NKX2-3Q8TAU0 364 aa18.11■□□□□ 0.49
CTSD-202ENST00000367196 GINM1Q9NU53 330 aa18.11■□□□□ 0.49
CTSD-202ENST00000367196 CDK5RAP2Q96SN8 1893 aa18.11■□□□□ 0.49
CTSD-202ENST00000367196 FLT1P17948 1338 aa18.1■□□□□ 0.49
CTSD-202ENST00000367196 FAM196BA6NMK8 535 aa18.1■□□□□ 0.49
CTSD-202ENST00000367196 USP17L5A8MUK1 530 aa18.1■□□□□ 0.49
CTSD-202ENST00000367196 ECM2O94769 699 aaPredicted RBP18.1■□□□□ 0.49
CTSD-202ENST00000367196 HLA-DOAP06340 250 aa18.1■□□□□ 0.49
CTSD-202ENST00000367196 ASNSP08243 561 aa18.1■□□□□ 0.49
CTSD-202ENST00000367196 ZAP70P43403 619 aa18.1■□□□□ 0.49
CTSD-202ENST00000367196 UBXN2AP68543 259 aa18.1■□□□□ 0.49
CTSD-202ENST00000367196 CRACR2BQ8N4Y2 399 aaPredicted RBP18.1■□□□□ 0.49
CTSD-202ENST00000367196 SLAIN1Q8ND83 568 aa18.1■□□□□ 0.49
CTSD-202ENST00000367196 TGFBRAP1Q8WUH2 860 aa18.1■□□□□ 0.49
CTSD-202ENST00000367196 CHMP4BQ9H444 224 aaKnown RBP18.1■□□□□ 0.49
CTSD-202ENST00000367196 HMMRO75330 724 aa18.09■□□□□ 0.49
CTSD-202ENST00000367196 IDH1O75874 414 aaKnown RBP18.09■□□□□ 0.49
CTSD-202ENST00000367196 SLURP2P0DP57 97 aa18.09■□□□□ 0.49
CTSD-202ENST00000367196 CTGFP29279 349 aa18.09■□□□□ 0.49
CTSD-202ENST00000367196 SPP2Q13103 211 aa18.09■□□□□ 0.49
CTSD-202ENST00000367196 FOXP4Q8IVH2 680 aaPredicted RBP18.09■□□□□ 0.49
CTSD-202ENST00000367196 MAPKAPK5Q8IW41 473 aa18.09■□□□□ 0.49
CTSD-202ENST00000367196 EAF2Q96CJ1 260 aaPredicted RBP18.09■□□□□ 0.49
CTSD-202ENST00000367196 CCDC8Q9H0W5 538 aaPredicted RBP18.09■□□□□ 0.49
CTSD-202ENST00000367196 MYO5AQ9Y4I1 1855 aaKnown RBP18.09■□□□□ 0.49
CTSD-202ENST00000367196 SIPA1L1O43166 1804 aa18.08■□□□□ 0.48
CTSD-202ENST00000367196 TNPO2O14787 897 aaKnown RBP18.08■□□□□ 0.48
CTSD-202ENST00000367196 MYCP01106 439 aaPredicted RBP18.08■□□□□ 0.48
CTSD-202ENST00000367196 GCLCP48506 637 aaPredicted RBP18.08■□□□□ 0.48
CTSD-202ENST00000367196 PRKCZQ05513 592 aa18.08■□□□□ 0.48
CTSD-202ENST00000367196 MAP3K12Q12852 859 aa18.08■□□□□ 0.48
CTSD-202ENST00000367196 FAM110CQ1W6H9 321 aa18.08■□□□□ 0.48
CTSD-202ENST00000367196 AACSQ86V21 672 aa18.08■□□□□ 0.48
CTSD-202ENST00000367196 PANK1Q8TE04 598 aa18.08■□□□□ 0.48
CTSD-202ENST00000367196 PIH1D3Q9NQM4 214 aaKnown RBP18.08■□□□□ 0.48
CTSD-202ENST00000367196 TLR7Q9NYK1 1049 aaKnown RBP18.08■□□□□ 0.48
CTSD-202ENST00000367196 BIN2Q9UBW5 565 aaPredicted RBP18.08■□□□□ 0.48
CTSD-202ENST00000367196 DDX19BQ9UMR2 479 aa18.08■□□□□ 0.48
CTSD-202ENST00000367196 MKI67P46013 3256 aaKnown RBP18.08■□□□□ 0.48
CTSD-202ENST00000367196 CYP7A1P22680 504 aa18.07■□□□□ 0.48
CTSD-202ENST00000367196 HMGCS2P54868 508 aa18.07■□□□□ 0.48
CTSD-202ENST00000367196 ADGRA1Q86SQ6 560 aa18.07■□□□□ 0.48
CTSD-202ENST00000367196 CCDC84Q86UT8 332 aaPredicted RBP18.07■□□□□ 0.48
CTSD-202ENST00000367196 COA7Q96BR5 231 aa18.07■□□□□ 0.48
CTSD-202ENST00000367196 TMOD4Q9NZQ9 345 aa18.07■□□□□ 0.48
CTSD-202ENST00000367196 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.07■□□□□ 0.48
CTSD-202ENST00000367196 EXOC6BQ9Y2D4 811 aa18.07■□□□□ 0.48
CTSD-202ENST00000367196 CAPN2P17655 700 aa18.06■□□□□ 0.48
CTSD-202ENST00000367196 TTF1Q15361 905 aaPredicted RBP18.06■□□□□ 0.48
CTSD-202ENST00000367196 SH3D19Q5HYK7 790 aa18.06■□□□□ 0.48
CTSD-202ENST00000367196 TREML2Q5T2D2 321 aa18.06■□□□□ 0.48
CTSD-202ENST00000367196 METTL16Q86W50 562 aaKnown RBP18.06■□□□□ 0.48
CTSD-202ENST00000367196 RPAP2Q8IXW5 612 aaPredicted RBP18.06■□□□□ 0.48
CTSD-202ENST00000367196 ANKRD13CQ8N6S4 541 aa18.06■□□□□ 0.48
CTSD-202ENST00000367196 WDR18Q9BV38 432 aa18.06■□□□□ 0.48
CTSD-202ENST00000367196 MYH1P12882 1939 aa18.06■□□□□ 0.48
CTSD-202ENST00000367196 USP5P45974 858 aa18.05■□□□□ 0.48
CTSD-202ENST00000367196 CLASRPQ8N2M8 674 aaKnown RBP18.05■□□□□ 0.48
CTSD-202ENST00000367196 MAGEB6Q8N7X4 407 aa18.05■□□□□ 0.48
CTSD-202ENST00000367196 PXYLP1Q8TE99 480 aa18.05■□□□□ 0.48
CTSD-202ENST00000367196 KIF1BPQ96EK5 621 aa18.05■□□□□ 0.48
CTSD-202ENST00000367196 PALD1Q9ULE6 856 aa18.05■□□□□ 0.48
CTSD-202ENST00000367196 C19orf81C9J6K1 198 aa18.04■□□□□ 0.48
CTSD-202ENST00000367196 ADCY3O60266 1144 aa18.04■□□□□ 0.48
CTSD-202ENST00000367196 GJB1P08034 283 aa18.04■□□□□ 0.48
CTSD-202ENST00000367196 CCL5P13501 91 aa18.04■□□□□ 0.48
CTSD-202ENST00000367196 FLT3LGP49771 235 aa18.04■□□□□ 0.48
CTSD-202ENST00000367196 BACE1P56817 501 aa18.04■□□□□ 0.48
CTSD-202ENST00000367196 IRX3P78415 501 aaPredicted RBP18.04■□□□□ 0.48
CTSD-202ENST00000367196 IRF5Q13568 498 aa18.04■□□□□ 0.48
CTSD-202ENST00000367196 MTFR1Q15390 333 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms