RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 SPTLC2O15270 562 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 MARCKSP29966 332 aaPredicted RBP9.48□□□□□ -0.89
CD46-209ENST00000367047 APBA1Q02410 837 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 RBL2Q08999 1139 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 FILIP1LQ4L180 1135 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 HHATQ5VTY9 493 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 NLRP14Q86W24 1093 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 TRMT44Q8IYL2 757 aaKnown RBP9.48□□□□□ -0.89
CD46-209ENST00000367047 LINC00301Q8NCQ3 95 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 B4GALNT2Q8NHY0 566 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 NUP58Q9BVL2 599 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 PPANQ9NQ55 473 aaKnown RBP9.48□□□□□ -0.89
CD46-209ENST00000367047 SPHKAPQ2M3C7 1700 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 PES1O00541 588 aaKnown RBP9.48□□□□□ -0.89
CD46-209ENST00000367047 ATP5JP18859 108 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 SKOR1P84550 965 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 PDE4BQ07343 736 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 NNTQ13423 1086 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 MYCBPAPQ8TBZ2 947 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 TMX4Q9H1E5 349 aaPredicted RBP9.48□□□□□ -0.89
CD46-209ENST00000367047 C19orf44Q9H6X5 657 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 NOD2Q9HC29 1040 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 NCOA5Q9HCD5 579 aaKnown RBP9.48□□□□□ -0.89
CD46-209ENST00000367047 NFE2L3Q9Y4A8 694 aa9.48□□□□□ -0.89
CD46-209ENST00000367047 A6NNZ2 444 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 CHL1O00533 1208 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 ANP32DO95626 131 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 KRT14P02533 472 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 PYGBP11216 843 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 TUBB8Q3ZCM7 444 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 TSGA10Q9BZW7 698 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 ACTR5Q9H9F9 607 aaPredicted RBP9.47□□□□□ -0.89
CD46-209ENST00000367047 MAST1Q9Y2H9 1570 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 CARMIL2Q6F5E8 1435 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 TEX33O43247 280 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 PPFIA2O75334 1257 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 FAM163BP0C2L3 166 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 NEFHP12036 1026 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 CDC27P30260 824 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 SYKP43405 635 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 AMPD2Q01433 879 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 ATL3Q6DD88 541 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 HIBCHQ6NVY1 386 aaPredicted RBP9.47□□□□□ -0.89
CD46-209ENST00000367047 RASGRP2Q7LDG7 609 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 NSUN7Q8NE18 718 aaKnown RBP9.47□□□□□ -0.89
CD46-209ENST00000367047 TRIM58Q8NG06 486 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 OSBPL7Q9BZF2 842 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 PAPOLBQ9NRJ5 636 aaKnown RBP9.47□□□□□ -0.89
CD46-209ENST00000367047 TRIM10Q9UDY6 481 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 FAM184BQ9ULE4 1060 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 HECW2Q9P2P5 1572 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 HSF2BPO75031 334 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 PPP1R37O75864 691 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 SMNDC1O75940 238 aaKnown RBP eCLIP9.47□□□□□ -0.892e-8■□□□□ 9.9
CD46-209ENST00000367047 PAPOLAP51003 745 aaKnown RBP9.47□□□□□ -0.89
CD46-209ENST00000367047 MTA1Q13330 715 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 PTGISQ16647 500 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 MSL1Q68DK7 614 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 CCDC47Q96A33 483 aaKnown RBP9.47□□□□□ -0.89
CD46-209ENST00000367047 PANX2Q96RD6 677 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 EPAS1Q99814 870 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 SLF1Q9BQI6 1058 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 FAM167BQ9BTA0 163 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 TTF2Q9UNY4 1162 aaKnown RBP9.47□□□□□ -0.89
CD46-209ENST00000367047 PCDHGC5Q9Y5F6 944 aa9.47□□□□□ -0.89
CD46-209ENST00000367047 ATP6V1G2O95670 118 aa9.46□□□□□ -0.89
CD46-209ENST00000367047 PPP1R7Q15435 360 aa9.46□□□□□ -0.89
CD46-209ENST00000367047 PNMA8AQ86V59 439 aaPredicted RBP9.46□□□□□ -0.89
CD46-209ENST00000367047 KCNG4Q8TDN1 519 aa9.46□□□□□ -0.89
CD46-209ENST00000367047 SSH3Q8TE77 659 aa9.46□□□□□ -0.89
CD46-209ENST00000367047 TCP11Q8WWU5 503 aa9.46□□□□□ -0.89
CD46-209ENST00000367047 CUL5Q93034 780 aa9.46□□□□□ -0.89
CD46-209ENST00000367047 NEK1Q96PY6 1258 aa9.46□□□□□ -0.89
CD46-209ENST00000367047 USP44Q9H0E7 712 aa9.46□□□□□ -0.89
CD46-209ENST00000367047 GOPCQ9HD26 462 aa9.46□□□□□ -0.89
CD46-209ENST00000367047 SAMSN1Q9NSI8 373 aaKnown RBP9.46□□□□□ -0.89
CD46-209ENST00000367047 GLI2P10070 1586 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 A0A0D9SFI3 127 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 BACH1O14867 736 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 SMIM24O75264 130 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 CLTAP09496 248 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 GNAT1P11488 350 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 SCTRP47872 440 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 IFFO1Q0D2I5 559 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 DRP2Q13474 957 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 SYNE3Q6ZMZ3 975 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 TSEN2Q8NCE0 465 aaKnown RBP9.46□□□□□ -0.9
CD46-209ENST00000367047 SUDS3Q9H7L9 328 aaPredicted RBP9.46□□□□□ -0.9
CD46-209ENST00000367047 TMEM165Q9HC07 324 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 C15orf41Q9Y2V0 281 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 SAR1BQ9Y6B6 198 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 SYCP2Q9BX26 1530 aa9.46□□□□□ -0.9
CD46-209ENST00000367047 TARSL2A2RTX5 802 aaKnown RBP9.45□□□□□ -0.9
CD46-209ENST00000367047 SPDYE3A6NKU9 549 aa9.45□□□□□ -0.9
CD46-209ENST00000367047 CTDNEP1O95476 244 aa9.45□□□□□ -0.9
CD46-209ENST00000367047 CASP14P31944 242 aa9.45□□□□□ -0.9
CD46-209ENST00000367047 MATR3P43243 847 aaKnown RBP eCLIP9.45□□□□□ -0.95e-7■■■■■ 27
CD46-209ENST00000367047 ANKRD20A8PQ5CZ79 823 aa9.45□□□□□ -0.9
CD46-209ENST00000367047 NBPF14Q5TI25 921 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms