RNA–Protein interactions for RNA: ENST00000366873.6

CAPN8-202, Transcript of calpain 8, humanhuman

TSL 5 BASIC

Gene CAPN8, Length 2,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-202ENST00000366873 ECM29Q5VYK3 1845 aa11.57□□□□□ -0.56
CAPN8-202ENST00000366873 FGRP09769 529 aa11.57□□□□□ -0.56
CAPN8-202ENST00000366873 VEGFAP15692 232 aaPredicted RBP11.57□□□□□ -0.56
CAPN8-202ENST00000366873 STK11IPQ8N1F8 1099 aa11.57□□□□□ -0.56
CAPN8-202ENST00000366873 ZNF526Q8TF50 670 aaPredicted RBP11.57□□□□□ -0.56
CAPN8-202ENST00000366873 DYNLL2Q96FJ2 89 aa11.57□□□□□ -0.56
CAPN8-202ENST00000366873 DEFB129Q9H1M3 183 aa11.57□□□□□ -0.56
CAPN8-202ENST00000366873 ATRNL1Q5VV63 1379 aa11.57□□□□□ -0.56
CAPN8-202ENST00000366873 SCN4AP35499 1836 aa11.56□□□□□ -0.56
CAPN8-202ENST00000366873 E7EWF7 191 aa11.56□□□□□ -0.56
CAPN8-202ENST00000366873 GABPAQ06546 454 aa11.56□□□□□ -0.56
CAPN8-202ENST00000366873 DNAJC18Q9H819 358 aa11.56□□□□□ -0.56
CAPN8-202ENST00000366873 TMOD2Q9NZR1 351 aa11.56□□□□□ -0.56
CAPN8-202ENST00000366873 POLR3DP05423 398 aaPredicted RBP11.56□□□□□ -0.56
CAPN8-202ENST00000366873 PRAMEF18Q5VWM3 479 aa11.56□□□□□ -0.56
CAPN8-202ENST00000366873 METTL16Q86W50 562 aaKnown RBP11.56□□□□□ -0.56
CAPN8-202ENST00000366873 ANAPC15P60006 121 aa11.55□□□□□ -0.56
CAPN8-202ENST00000366873 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
CAPN8-202ENST00000366873 PNMA8AQ86V59 439 aaPredicted RBP11.55□□□□□ -0.56
CAPN8-202ENST00000366873 SLC44A5Q8NCS7 719 aa11.55□□□□□ -0.56
CAPN8-202ENST00000366873 ZC3H15Q8WU90 426 aaKnown RBP11.55□□□□□ -0.56
CAPN8-202ENST00000366873 STAG1Q8WVM7 1258 aa11.55□□□□□ -0.56
CAPN8-202ENST00000366873 DHX36Q9H2U1 1008 aaKnown RBP11.55□□□□□ -0.56
CAPN8-202ENST00000366873 ROBO3Q96MS0 1386 aa11.55□□□□□ -0.56
CAPN8-202ENST00000366873 ZKSCAN1P17029 563 aaPredicted RBP11.55□□□□□ -0.56
CAPN8-202ENST00000366873 EAPPQ56P03 285 aaPredicted RBP11.55□□□□□ -0.56
CAPN8-202ENST00000366873 AKNAD1Q5T1N1 836 aa11.55□□□□□ -0.56
CAPN8-202ENST00000366873 PI4KBQ9UBF8 816 aa11.55□□□□□ -0.56
CAPN8-202ENST00000366873 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.55□□□□□ -0.56
CAPN8-202ENST00000366873 NEDD4P46934 1319 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 PITPNM2Q9BZ72 1349 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 PRDM1O75626 825 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 CPA1P15085 419 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 MCCP23508 829 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 TTC6Q86TZ1 520 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 ZSCAN29Q8IWY8 852 aaPredicted RBP11.54□□□□□ -0.56
CAPN8-202ENST00000366873 CSRNP1Q96S65 589 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 COL2A1P02458 1487 aaPredicted RBP11.54□□□□□ -0.56
CAPN8-202ENST00000366873 FAM196BA6NMK8 535 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 MAP3K10Q02779 954 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 TNFAIP1Q13829 316 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 NBPF12Q5TAG4 269 aaPredicted RBP11.54□□□□□ -0.56
CAPN8-202ENST00000366873 C16orf86Q6ZW13 317 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 EHD4Q9H223 541 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 SERPINB13Q9UIV8 391 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 NAV1Q8NEY1 1877 aa11.54□□□□□ -0.56
CAPN8-202ENST00000366873 CDK8P49336 464 aa11.53□□□□□ -0.56
CAPN8-202ENST00000366873 APOBEC3FQ8IUX4 373 aaKnown RBP11.53□□□□□ -0.56
CAPN8-202ENST00000366873 MYH1P12882 1939 aa11.53□□□□□ -0.56
CAPN8-202ENST00000366873 POLR2AP24928 1970 aaKnown RBP11.53□□□□□ -0.56
CAPN8-202ENST00000366873 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
CAPN8-202ENST00000366873 ADM5C9JUS6 153 aa11.53□□□□□ -0.56
CAPN8-202ENST00000366873 TNNI2P48788 182 aa11.53□□□□□ -0.56
CAPN8-202ENST00000366873 MFSD6Q6ZSS7 791 aa11.53□□□□□ -0.56
CAPN8-202ENST00000366873 FOXP4Q8IVH2 680 aaPredicted RBP11.53□□□□□ -0.56
CAPN8-202ENST00000366873 DCPSQ96C86 337 aaKnown RBP11.53□□□□□ -0.56
CAPN8-202ENST00000366873 JAKMIP1Q96N16 626 aaKnown RBP11.53□□□□□ -0.56
CAPN8-202ENST00000366873 NEK1Q96PY6 1258 aa11.53□□□□□ -0.56
CAPN8-202ENST00000366873 UPF3BQ9BZI7 483 aaKnown RBP11.53□□□□□ -0.56
CAPN8-202ENST00000366873 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
CAPN8-202ENST00000366873 ZSWIM5Q9P217 1185 aa11.53□□□□□ -0.56
CAPN8-202ENST00000366873 SHMT1P34896 483 aa11.52□□□□□ -0.56
CAPN8-202ENST00000366873 RRP1BQ14684 758 aaKnown RBP11.52□□□□□ -0.56
CAPN8-202ENST00000366873 MIGA2Q7L4E1 593 aa11.52□□□□□ -0.56
CAPN8-202ENST00000366873 KRT26Q7Z3Y9 468 aa11.52□□□□□ -0.56
CAPN8-202ENST00000366873 MB21D2Q8IYB1 491 aaPredicted RBP11.52□□□□□ -0.56
CAPN8-202ENST00000366873 TM6SF1Q9BZW5 370 aa11.52□□□□□ -0.56
CAPN8-202ENST00000366873 B4E1Z4 1266 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 ORC4O43929 436 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 HLA-DOAP06340 250 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 CASTP20810 708 aaKnown RBP11.52□□□□□ -0.57
CAPN8-202ENST00000366873 RASA1P20936 1047 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 ANTXR2P58335 489 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 MAP1SQ66K74 1059 aaPredicted RBP11.52□□□□□ -0.57
CAPN8-202ENST00000366873 TATDN1Q6P1N9 297 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 CYB5R4Q7L1T6 521 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 CHST3Q7LGC8 479 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 AMOTL1Q8IY63 956 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 PANK2Q9BZ23 570 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 GLIS2Q9BZE0 524 aaPredicted RBP11.52□□□□□ -0.57
CAPN8-202ENST00000366873 FZD1Q9UP38 647 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 LAMA4Q16363 1823 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 PCNTO95613 3336 aa11.52□□□□□ -0.57
CAPN8-202ENST00000366873 CD2BP2O95400 341 aaKnown RBP11.51□□□□□ -0.57
CAPN8-202ENST00000366873 MCM4P33991 863 aa11.51□□□□□ -0.57
CAPN8-202ENST00000366873 JAG1P78504 1218 aa11.51□□□□□ -0.57
CAPN8-202ENST00000366873 EXOSC10Q01780 885 aaKnown RBP11.51□□□□□ -0.57
CAPN8-202ENST00000366873 KRT32Q14532 448 aa11.51□□□□□ -0.57
CAPN8-202ENST00000366873 USP48Q86UV5 1035 aa11.51□□□□□ -0.57
CAPN8-202ENST00000366873 NCOA7Q8NI08 942 aa11.51□□□□□ -0.57
CAPN8-202ENST00000366873 TCEANC2Q96MN5 208 aa11.51□□□□□ -0.57
CAPN8-202ENST00000366873 SSC5DA1L4H1 1573 aa11.51□□□□□ -0.57
CAPN8-202ENST00000366873 TBC1D12O60347 775 aa11.51□□□□□ -0.57
CAPN8-202ENST00000366873 KDM4AO75164 1064 aa11.51□□□□□ -0.57
CAPN8-202ENST00000366873 PCP11498 1178 aaKnown RBP11.51□□□□□ -0.57
CAPN8-202ENST00000366873 FMR1Q06787 632 aaKnown RBP eCLIP11.51□□□□□ -0.57
CAPN8-202ENST00000366873 PDE4BQ07343 736 aa11.51□□□□□ -0.57
CAPN8-202ENST00000366873 SHROOM1Q2M3G4 852 aaPredicted RBP11.51□□□□□ -0.57
CAPN8-202ENST00000366873 FAM47AQ5JRC9 791 aa11.51□□□□□ -0.57
CAPN8-202ENST00000366873 RUFY3Q7L099 469 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms