RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 FAM196AQ6ZSG2 479 aa11.06□□□□□ -0.64
H3F3A-201ENST00000366813 ADAM19Q9H013 955 aa11.06□□□□□ -0.64
H3F3A-201ENST00000366813 KCNK4Q9NYG8 393 aa11.06□□□□□ -0.64
H3F3A-201ENST00000366813 STOML1Q9UBI4 398 aa11.06□□□□□ -0.64
H3F3A-201ENST00000366813 RAXQ9Y2V3 346 aa11.06□□□□□ -0.64
H3F3A-201ENST00000366813 LRPPRCP42704 1394 aaKnown RBP11.06□□□□□ -0.64
H3F3A-201ENST00000366813 ADGRB2O60241 1585 aa11.05□□□□□ -0.64
H3F3A-201ENST00000366813 NRKQ7Z2Y5 1582 aa11.05□□□□□ -0.64
H3F3A-201ENST00000366813 PLCH1Q4KWH8 1693 aa11.05□□□□□ -0.64
H3F3A-201ENST00000366813 WISP1O95388 367 aa11.05□□□□□ -0.64
H3F3A-201ENST00000366813 ZNF211Q13398 564 aaPredicted RBP11.05□□□□□ -0.64
H3F3A-201ENST00000366813 ZNF326Q5BKZ1 582 aaKnown RBP11.05□□□□□ -0.64
H3F3A-201ENST00000366813 ADAMTSL4Q6UY14 1074 aa11.05□□□□□ -0.64
H3F3A-201ENST00000366813 Q6ZS46 218 aa11.05□□□□□ -0.64
H3F3A-201ENST00000366813 KRT28Q7Z3Y7 464 aa11.05□□□□□ -0.64
H3F3A-201ENST00000366813 UBL7Q96S82 380 aaPredicted RBP11.05□□□□□ -0.64
H3F3A-201ENST00000366813 BTG4Q9NY30 223 aa11.05□□□□□ -0.64
H3F3A-201ENST00000366813 POLIQ9UNA4 740 aa11.05□□□□□ -0.64
H3F3A-201ENST00000366813 ANKRD30AQ9BXX3 1397 aa11.05□□□□□ -0.64
H3F3A-201ENST00000366813 NUP188Q5SRE5 1749 aa11.05□□□□□ -0.64
H3F3A-201ENST00000366813 SOWAHDA6NJG2 315 aa11.04□□□□□ -0.64
H3F3A-201ENST00000366813 PDE2AO00408 941 aaPredicted RBP11.04□□□□□ -0.64
H3F3A-201ENST00000366813 DDX3YO15523 660 aaKnown RBP11.04□□□□□ -0.64
H3F3A-201ENST00000366813 DHX15O43143 795 aaKnown RBP11.04□□□□□ -0.64
H3F3A-201ENST00000366813 MTMR3Q13615 1198 aa11.04□□□□□ -0.64
H3F3A-201ENST00000366813 KLHDC7BQ96G42 594 aa11.04□□□□□ -0.64
H3F3A-201ENST00000366813 ANO2Q9NQ90 1003 aa11.04□□□□□ -0.64
H3F3A-201ENST00000366813 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.04□□□□□ -0.64
H3F3A-201ENST00000366813 NWD2Q9ULI1 1742 aa11.03□□□□□ -0.64
H3F3A-201ENST00000366813 RREB1Q92766 1687 aa11.03□□□□□ -0.64
H3F3A-201ENST00000366813 SPATA31A5Q5VU36 1347 aa11.03□□□□□ -0.64
H3F3A-201ENST00000366813 SPATA31A7Q8IWB4 1347 aa11.03□□□□□ -0.64
H3F3A-201ENST00000366813 H3BRJ5 948 aa11.03□□□□□ -0.64
H3F3A-201ENST00000366813 ICMTO60725 284 aa11.03□□□□□ -0.64
H3F3A-201ENST00000366813 FAM13AO94988 1023 aa11.03□□□□□ -0.64
H3F3A-201ENST00000366813 DZANK1Q9NVP4 752 aa11.03□□□□□ -0.64
H3F3A-201ENST00000366813 DAPK1P53355 1430 aa11.02□□□□□ -0.65
H3F3A-201ENST00000366813 TRPA1O75762 1119 aa11.02□□□□□ -0.65
H3F3A-201ENST00000366813 ACPPP15309 386 aa11.02□□□□□ -0.65
H3F3A-201ENST00000366813 ARL4DP49703 201 aa11.02□□□□□ -0.65
H3F3A-201ENST00000366813 FKBP4Q02790 459 aaKnown RBP eCLIP11.02□□□□□ -0.65
H3F3A-201ENST00000366813 SND1Q7KZF4 910 aaKnown RBP eCLIP11.02□□□□□ -0.652e-10■■■■■ 27.8
H3F3A-201ENST00000366813 SLC7A3Q8WY07 619 aa11.02□□□□□ -0.65
H3F3A-201ENST00000366813 WNT8BQ93098 351 aa11.02□□□□□ -0.65
H3F3A-201ENST00000366813 CROCC2H7BZ55 1655 aa11.01□□□□□ -0.65
H3F3A-201ENST00000366813 MYOM1P52179 1685 aa11.01□□□□□ -0.65
H3F3A-201ENST00000366813 GSC2O15499 205 aa11.01□□□□□ -0.65
H3F3A-201ENST00000366813 SART1O43290 800 aaKnown RBP11.01□□□□□ -0.65
H3F3A-201ENST00000366813 HSPA6P17066 643 aa11.01□□□□□ -0.65
H3F3A-201ENST00000366813 KIAA1211Q6ZU35 1233 aa11.01□□□□□ -0.65
H3F3A-201ENST00000366813 OSGEPQ9NPF4 335 aa11.01□□□□□ -0.65
H3F3A-201ENST00000366813 PODXL2Q9NZ53 605 aa11.01□□□□□ -0.65
H3F3A-201ENST00000366813 H3BRB1 525 aa11□□□□□ -0.65
H3F3A-201ENST00000366813 PHACTR2O75167 634 aa11□□□□□ -0.65
H3F3A-201ENST00000366813 USP5P45974 858 aa11□□□□□ -0.65
H3F3A-201ENST00000366813 EHHADHQ08426 723 aa11□□□□□ -0.65
H3F3A-201ENST00000366813 UTP4Q969X6 686 aaKnown RBP11□□□□□ -0.65
H3F3A-201ENST00000366813 OSMRQ99650 979 aa11□□□□□ -0.65
H3F3A-201ENST00000366813 TUT1Q9H6E5 874 aaKnown RBP11□□□□□ -0.65
H3F3A-201ENST00000366813 NFKBIEO00221 500 aa10.99□□□□□ -0.65
H3F3A-201ENST00000366813 NPR3P17342 541 aa10.99□□□□□ -0.65
H3F3A-201ENST00000366813 GPR162Q16538 588 aa10.99□□□□□ -0.65
H3F3A-201ENST00000366813 UBASH3BQ8TF42 649 aa10.99□□□□□ -0.65
H3F3A-201ENST00000366813 PSMG3-AS1Q96PY0 264 aa10.99□□□□□ -0.65
H3F3A-201ENST00000366813 PCMTD2Q9NV79 361 aa10.99□□□□□ -0.65
H3F3A-201ENST00000366813 THSD7AQ9UPZ6 1657 aa10.98□□□□□ -0.65
H3F3A-201ENST00000366813 IGLV1-40P01703 118 aa10.98□□□□□ -0.65
H3F3A-201ENST00000366813 EDN3P14138 238 aa10.98□□□□□ -0.65
H3F3A-201ENST00000366813 NLRP12P59046 1061 aa10.98□□□□□ -0.65
H3F3A-201ENST00000366813 ECM1Q16610 540 aa10.98□□□□□ -0.65
H3F3A-201ENST00000366813 UVSSAQ2YD98 709 aa10.98□□□□□ -0.65
H3F3A-201ENST00000366813 GLYCTKQ8IVS8 523 aa10.98□□□□□ -0.65
H3F3A-201ENST00000366813 FOXD4L4Q8WXT5 416 aaPredicted RBP10.98□□□□□ -0.65
H3F3A-201ENST00000366813 CHRDQ9H2X0 955 aa10.98□□□□□ -0.65
H3F3A-201ENST00000366813 CCDC144AA2RUR9 1427 aa10.98□□□□□ -0.65
H3F3A-201ENST00000366813 NRAPQ86VF7 1730 aa10.97□□□□□ -0.65
H3F3A-201ENST00000366813 TM4SF5O14894 197 aa10.97□□□□□ -0.65
H3F3A-201ENST00000366813 EREGO14944 169 aa10.97□□□□□ -0.65
H3F3A-201ENST00000366813 ADAM11O75078 769 aa10.97□□□□□ -0.65
H3F3A-201ENST00000366813 TNFRSF21O75509 655 aa10.97□□□□□ -0.65
H3F3A-201ENST00000366813 SSTR4P31391 388 aa10.97□□□□□ -0.65
H3F3A-201ENST00000366813 ARMC10Q8N2F6 343 aa10.97□□□□□ -0.65
H3F3A-201ENST00000366813 TMEM102Q8N9M5 508 aaPredicted RBP10.97□□□□□ -0.65
H3F3A-201ENST00000366813 HHIPQ96QV1 700 aa10.97□□□□□ -0.65
H3F3A-201ENST00000366813 HFM1A2PYH4 1435 aa10.97□□□□□ -0.65
H3F3A-201ENST00000366813 TNS3Q68CZ2 1445 aa10.97□□□□□ -0.65
H3F3A-201ENST00000366813 E9PCH4 1651 aa10.97□□□□□ -0.65
H3F3A-201ENST00000366813 TMCO4Q5TGY1 634 aa10.96□□□□□ -0.65
H3F3A-201ENST00000366813 SNX29Q8TEQ0 813 aa10.96□□□□□ -0.65
H3F3A-201ENST00000366813 BSNDQ8WZ55 320 aa10.96□□□□□ -0.65
H3F3A-201ENST00000366813 ANKRD50Q9ULJ7 1429 aa10.96□□□□□ -0.65
H3F3A-201ENST00000366813 GOLGB1Q14789 3259 aaKnown RBP10.96□□□□□ -0.66
H3F3A-201ENST00000366813 SHANK3Q9BYB0 1731 aa10.95□□□□□ -0.66
H3F3A-201ENST00000366813 CDC42BPGQ6DT37 1551 aa10.95□□□□□ -0.66
H3F3A-201ENST00000366813 NAIPQ13075 1403 aa10.95□□□□□ -0.66
H3F3A-201ENST00000366813 C19orf57Q0VDD7 668 aa10.95□□□□□ -0.66
H3F3A-201ENST00000366813 PDE3BQ13370 1112 aa10.95□□□□□ -0.66
H3F3A-201ENST00000366813 NXPE3Q969Y0 559 aa10.95□□□□□ -0.66
H3F3A-201ENST00000366813 FAM46AQ96IP4 442 aaKnown RBP10.95□□□□□ -0.66
H3F3A-201ENST00000366813 RUSC1Q9BVN2 902 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms