RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 RBSNQ9H1K0 784 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 CLTCL1P53675 1640 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 EXOC7Q9UPT5 735 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 POTEDQ86YR6 584 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 GPR108Q9NPR9 543 aa13.46□□□□□ -0.25
CDC42BPA-203ENST00000366766 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.46□□□□□ -0.25
CDC42BPA-203ENST00000366766 MED14O60244 1454 aa13.46□□□□□ -0.25
CDC42BPA-203ENST00000366766 NEURL1BA8MQ27 555 aa13.46□□□□□ -0.25
CDC42BPA-203ENST00000366766 TNNI2P48788 182 aa13.46□□□□□ -0.25
CDC42BPA-203ENST00000366766 CCDC50Q8IVM0 306 aa13.46□□□□□ -0.25
CDC42BPA-203ENST00000366766 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.25
CDC42BPA-203ENST00000366766 TTC38Q5R3I4 469 aa13.46□□□□□ -0.25
CDC42BPA-203ENST00000366766 OTUD6BQ8N6M0 293 aa13.46□□□□□ -0.25
CDC42BPA-203ENST00000366766 ZSWIM6Q9HCJ5 1215 aa13.46□□□□□ -0.25
CDC42BPA-203ENST00000366766 LZTFL1Q9NQ48 299 aa13.46□□□□□ -0.25
CDC42BPA-203ENST00000366766 A0A1W2PQ27 194 aa13.46□□□□□ -0.26
CDC42BPA-203ENST00000366766 A0A1W2PQ64 194 aa13.46□□□□□ -0.26
CDC42BPA-203ENST00000366766 A0A1W2PQD8 194 aa13.46□□□□□ -0.26
CDC42BPA-203ENST00000366766 EIF4A1P60842 406 aaKnown RBP13.46□□□□□ -0.26
CDC42BPA-203ENST00000366766 MTMR3Q13615 1198 aa13.46□□□□□ -0.26
CDC42BPA-203ENST00000366766 NOC4LQ9BVI4 516 aaKnown RBP13.46□□□□□ -0.26
CDC42BPA-203ENST00000366766 ARPP21Q9UBL0 812 aaPredicted RBP13.46□□□□□ -0.26
CDC42BPA-203ENST00000366766 RBM17Q96I25 401 aaKnown RBP13.46□□□□□ -0.26
CDC42BPA-203ENST00000366766 IWS1Q96ST2 819 aa13.46□□□□□ -0.26
CDC42BPA-203ENST00000366766 POLR2DO15514 142 aaKnown RBP13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 RAB11FIP4Q86YS3 637 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 SMC6Q96SB8 1091 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 PUF60Q9UHX1 559 aaKnown RBP13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 ABCC3O15438 1527 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 BRD3Q15059 726 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 SYT10Q6XYQ8 523 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 HAUS7Q99871 368 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 CBX8Q9HC52 389 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 CETN3O15182 167 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 PFKFB2O60825 505 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 CDC25BP30305 580 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 ARHGEF10LQ9HCE6 1279 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 PRDM10Q9NQV6 1147 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 KIAA1468Q9P260 1216 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 GBP1P32455 592 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 IQSEC3Q9UPP2 1182 aaPredicted RBP13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 PNMA6EA0A0J9YXQ4 647 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 STX10O60499 249 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 SETDB1Q15047 1291 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 ITSN1Q15811 1721 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 GRIPAP1Q4V328 841 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 FBF1Q8TES7 1133 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 ATRIPQ8WXE1 791 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 USP44Q9H0E7 712 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 MED23Q9ULK4 1368 aa13.45□□□□□ -0.26
CDC42BPA-203ENST00000366766 ARHGAP25P42331 645 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 G2E3Q7L622 706 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 SPATS2Q86XZ4 545 aaKnown RBP13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 MAP3K9P80192 1104 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 CNBD1Q8NA66 436 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 UTP11Q9Y3A2 253 aaKnown RBP13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 GIGYF1O75420 1035 aaPredicted RBP13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 CIAO1O76071 339 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 ZC3H13Q5T200 1668 aaKnown RBP13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 C8orf74Q6P047 294 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 CSGALNACT2Q8N6G5 542 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 TRAF5O00463 557 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 CPLX4Q7Z7G2 160 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 DIS3L2Q8IYB7 885 aaKnown RBP13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 AFAP1L1Q8TED9 768 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 REXO1Q8N1G1 1221 aaKnown RBP13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 CUEDC2Q9H467 287 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 PLCB1Q9NQ66 1216 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 COPRSQ9NQ92 184 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 MYL1P05976 194 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 GABPB2Q8TAK5 448 aaPredicted RBP13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 GOLGA5Q8TBA6 731 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 CEP63Q96MT8 703 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 WWC3Q9ULE0 1092 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 LAD1O00515 517 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 CFAP221Q4G0U5 840 aa13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDC42BPA-203ENST00000366766 TRAPPC10P48553 1259 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 TNNQ9UQP3 1299 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 NFE2L3Q9Y4A8 694 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 E9PCH4 1651 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 ZMYM6O95789 1325 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 SPATA5Q8NB90 893 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 CCDC110Q8TBZ0 833 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 KRT24Q2M2I5 525 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 PLEKHF1Q96S99 279 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 DBNDD2Q9BQY9 259 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 MYO1AQ9UBC5 1043 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 CTNND2Q9UQB3 1225 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 ADCY9O60503 1353 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 AKNAD1Q5T1N1 836 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 NKIRAS1Q9NYS0 192 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 PAK2Q13177 524 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 MYSM1Q5VVJ2 828 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 MRVI1Q9Y6F6 885 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 ATG3Q9NT62 314 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 RSPH14Q9UHP6 348 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 TAOK1Q7L7X3 1001 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms