RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 CRISPLD2Q9H0B8 497 aa13.67□□□□□ -0.22
CSNK1E-202ENST00000366216 ZMYND8Q9ULU4 1186 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-202ENST00000366216 BCRP11274 1271 aa13.66□□□□□ -0.22
CSNK1E-202ENST00000366216 PDE1AP54750 535 aa13.66□□□□□ -0.22
CSNK1E-202ENST00000366216 OTUD7AQ8TE49 926 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-202ENST00000366216 PXYLP1Q8TE99 480 aa13.66□□□□□ -0.22
CSNK1E-202ENST00000366216 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
CSNK1E-202ENST00000366216 PUS3Q9BZE2 481 aaKnown RBP13.66□□□□□ -0.22
CSNK1E-202ENST00000366216 COPRSQ9NQ92 184 aa13.66□□□□□ -0.22
CSNK1E-202ENST00000366216 IQSEC3Q9UPP2 1182 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-202ENST00000366216 KCNH4Q9UQ05 1017 aa13.66□□□□□ -0.22
CSNK1E-202ENST00000366216 MYH2Q9UKX2 1941 aa13.65□□□□□ -0.22
CSNK1E-202ENST00000366216 EIF5BO60841 1220 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-202ENST00000366216 MAGEA10P43363 369 aaPredicted RBP13.65□□□□□ -0.22
CSNK1E-202ENST00000366216 RFX5P48382 616 aaPredicted RBP13.65□□□□□ -0.22
CSNK1E-202ENST00000366216 FLT3LGP49771 235 aa13.65□□□□□ -0.22
CSNK1E-202ENST00000366216 G3BP1Q13283 466 aaKnown RBP eCLIP13.65□□□□□ -0.22
CSNK1E-202ENST00000366216 DCAF15Q66K64 600 aa13.65□□□□□ -0.22
CSNK1E-202ENST00000366216 PRDM6Q9NQX0 595 aa13.65□□□□□ -0.22
CSNK1E-202ENST00000366216 RPAP1Q9BWH6 1393 aaPredicted RBP13.65□□□□□ -0.22
CSNK1E-202ENST00000366216 RPTORQ8N122 1335 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 MAST2Q6P0Q8 1798 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 CYP2C8P10632 490 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 GSPT1P15170 499 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 SYN1P17600 705 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 MX1P20591 662 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 ANP32AP39687 249 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 IFIT5Q13325 482 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 OS9Q13438 667 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 IRF5Q13568 498 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 APOBEC3HQ6NTF7 200 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 GPAT2Q6NUI2 795 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 LMBR1LQ6UX01 489 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 MIGA2Q7L4E1 593 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 FAM83AQ86UY5 434 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 ANKLE1Q8NAG6 615 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 ZNF341Q9BYN7 854 aa13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 UBE2OQ9C0C9 1292 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 PA2G4Q9UQ80 394 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-202ENST00000366216 LTBP2Q14767 1821 aa13.63□□□□□ -0.23
CSNK1E-202ENST00000366216 HIBADHP31937 336 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-202ENST00000366216 HDLBPQ00341 1268 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-202ENST00000366216 FKBP1CQ5VVH2 108 aa13.63□□□□□ -0.23
CSNK1E-202ENST00000366216 FBXO33Q7Z6M2 555 aa13.63□□□□□ -0.23
CSNK1E-202ENST00000366216 CLASRPQ8N2M8 674 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-202ENST00000366216 IL1RAPL2Q9NP60 686 aa13.63□□□□□ -0.23
CSNK1E-202ENST00000366216 TMOD2Q9NZR1 351 aa13.63□□□□□ -0.23
CSNK1E-202ENST00000366216 LOC285556D6RIA3 1793 aa13.63□□□□□ -0.23
CSNK1E-202ENST00000366216 COL2A1P02458 1487 aaPredicted RBP13.62□□□□□ -0.23
CSNK1E-202ENST00000366216 CDC45O75419 566 aa13.62□□□□□ -0.23
CSNK1E-202ENST00000366216 SEC24BO95487 1268 aa13.62□□□□□ -0.23
CSNK1E-202ENST00000366216 LDHAL6AQ6ZMR3 332 aa13.62□□□□□ -0.23
CSNK1E-202ENST00000366216 TEKT1Q969V4 418 aa13.62□□□□□ -0.23
CSNK1E-202ENST00000366216 GUCD1Q96NT3 240 aa13.62□□□□□ -0.23
CSNK1E-202ENST00000366216 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
CSNK1E-202ENST00000366216 ZNF112Q9UJU3 913 aa13.62□□□□□ -0.23
CSNK1E-202ENST00000366216 CHMP3Q9Y3E7 222 aa13.62□□□□□ -0.23
CSNK1E-202ENST00000366216 MUC3AQ02505 3323 aa13.61□□□□□ -0.23
CSNK1E-202ENST00000366216 TNPO2O14787 897 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-202ENST00000366216 SLURP2P0DP57 97 aa13.61□□□□□ -0.23
CSNK1E-202ENST00000366216 UBE4AQ14139 1066 aa13.61□□□□□ -0.23
CSNK1E-202ENST00000366216 FAM109BQ6ICB4 259 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-202ENST00000366216 ZDHHC15Q96MV8 337 aa13.61□□□□□ -0.23
CSNK1E-202ENST00000366216 NBPF3Q9H094 633 aa13.61□□□□□ -0.23
CSNK1E-202ENST00000366216 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSNK1E-202ENST00000366216 TTC41PQ6P2S7 1318 aa13.61□□□□□ -0.23
CSNK1E-202ENST00000366216 NCOR1O75376 2440 aa13.6□□□□□ -0.23
CSNK1E-202ENST00000366216 SDSP20132 328 aa13.6□□□□□ -0.23
CSNK1E-202ENST00000366216 CHAF1AQ13111 956 aaPredicted RBP13.6□□□□□ -0.23
CSNK1E-202ENST00000366216 TAOK2Q9UL54 1235 aa13.6□□□□□ -0.23
CSNK1E-202ENST00000366216 CDH23Q9H251 3354 aa13.6□□□□□ -0.23
CSNK1E-202ENST00000366216 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
CSNK1E-202ENST00000366216 CXCL11O14625 94 aa13.59□□□□□ -0.23
CSNK1E-202ENST00000366216 CIAO1O76071 339 aa13.59□□□□□ -0.23
CSNK1E-202ENST00000366216 NFIAQ12857 509 aa13.59□□□□□ -0.23
CSNK1E-202ENST00000366216 TAF7LQ5H9L4 462 aa13.59□□□□□ -0.23
CSNK1E-202ENST00000366216 NOL9Q5SY16 702 aaKnown RBP13.59□□□□□ -0.23
CSNK1E-202ENST00000366216 TBC1D9Q6ZT07 1266 aa13.59□□□□□ -0.23
CSNK1E-202ENST00000366216 ZFPM1Q8IX07 1006 aa13.59□□□□□ -0.23
CSNK1E-202ENST00000366216 TBC1D22AQ8WUA7 517 aa13.59□□□□□ -0.23
CSNK1E-202ENST00000366216 C11orf49Q9H6J7 331 aa13.59□□□□□ -0.23
CSNK1E-202ENST00000366216 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
CSNK1E-202ENST00000366216 ABCB7O75027 752 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 IFIT2P09913 472 aaKnown RBP13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 CCDC57Q2TAC2 916 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 FASTKD5Q7L8L6 764 aaKnown RBP13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 KLHDC4Q8TBB5 520 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 PI4K2BQ8TCG2 481 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 COA7Q96BR5 231 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 GPATCH3Q96I76 525 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 FAM161BQ96MY7 647 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 TBC1D32Q96NH3 1257 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 MRIQ9BWK5 157 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 SIL1Q9H173 461 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 ATRNL1Q5VV63 1379 aa13.58□□□□□ -0.24
CSNK1E-202ENST00000366216 ERC2O15083 957 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 GLRX3O76003 335 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 HMGCRP04035 888 aa13.57□□□□□ -0.24
CSNK1E-202ENST00000366216 IL15P40933 162 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms