RNA–Protein interactions for RNA: ENST00000365040.1

RNU1-140P-201, Transcript of RNA, U1 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU1-140P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-140P-201ENST00000365040 SPACA7Q96KW9 195 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 SLC30A3Q99726 388 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 COL25A1Q9BXS0 654 aaPredicted RBP4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 OXCT2Q9BYC2 517 aaPredicted RBP4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 NIF3L1Q9GZT8 377 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 ZFYVE28Q9HCC9 887 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 TFCP2L1Q9NZI6 479 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 FRRS1LQ9P0K9 344 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 TMEM63CQ9P1W3 806 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 CD2APQ9Y5K6 639 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 CGNL1Q0VF96 1302 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 ARFGEF1Q9Y6D6 1849 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 KAT6BQ8WYB5 2073 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 UBR3Q6ZT12 1888 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 PLEKHG2Q9H7P9 1386 aa4.39□□□□□ -1.71
RNU1-140P-201ENST00000365040 ZNF831Q5JPB2 1677 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 EDC4Q6P2E9 1401 aaKnown RBP4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 ELOA3CA0A087WX78 387 aaPredicted RBP4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 ELOA3DA6NLF2 546 aaPredicted RBP4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 MMP20O60882 483 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 SASH3O75995 380 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 WFS1O76024 890 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 LDHBP07195 334 aaKnown RBP4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 VAMP1P23763 118 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 CTBSQ01459 385 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 ELOA3BQ3SY89 546 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 GALNT12Q8IXK2 581 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 ELOA3Q8NG57 546 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 UBE2OQ9C0C9 1292 aaKnown RBP4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 PDGFDQ9GZP0 370 aaPredicted RBP4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 CHRDQ9H2X0 955 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 NLRP2Q9NX02 1062 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 SPG7Q9UQ90 795 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 USP20Q9Y2K6 914 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 PNPLA7Q6ZV29 1317 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 RTL1A6NKG5 1358 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 USP31Q70CQ4 1352 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 KTN1Q86UP2 1357 aaKnown RBP4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 USP47Q96K76 1375 aa4.38□□□□□ -1.71
RNU1-140P-201ENST00000365040 ITGB4P16144 1822 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 BRCA1P38398 1863 aaKnown RBP4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 A6NHS1 94 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 EIF4EBP3O60516 100 aaPredicted RBP4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 GHRHP01286 108 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 SLURP2P0DP57 97 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 ALAS2P22557 587 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 TARSP26639 723 aaKnown RBP4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 GNA15P30679 374 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 ADH7P40394 386 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 ORC1Q13415 861 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 ZNF827Q17R98 1081 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 KRT25Q7Z3Z0 450 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 GIPC2Q8TF65 315 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 MDFIQ99750 246 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 ZFYVE1Q9HBF4 777 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 ZFATQ9P243 1243 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 FOXD3Q9UJU5 478 aaPredicted RBP4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 HCN2Q9UL51 889 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 ERBB4Q15303 1308 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 TTC21BQ7Z4L5 1316 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 ANKRD26Q9UPS8 1709 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 KIF20BQ96Q89 1820 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 C10orf71Q711Q0 1435 aa4.37□□□□□ -1.71
RNU1-140P-201ENST00000365040 TOGARAM1Q9Y4F4 1720 aa4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 PIK3R2O00459 728 aa4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 XRCC5P13010 732 aaKnown RBP4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 KIAA0319Q5VV43 1072 aa4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 PRPF40BQ6NWY9 871 aaKnown RBP4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 NCAPG2Q86XI2 1143 aa4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 GPR161Q8N6U8 529 aaKnown RBP4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 C1orf127Q8N9H9 656 aa4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 TTC9Q92623 222 aa4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 CCDC74AQ96AQ1 378 aa4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 DNAJB12Q9NXW2 375 aaKnown RBP4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 SALL4Q9UJQ4 1053 aa4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 SLC6A14Q9UN76 642 aa4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 ROCK2O75116 1388 aaKnown RBP4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 NSD2O96028 1365 aa4.36□□□□□ -1.71
RNU1-140P-201ENST00000365040 KIAA1551Q9HCM1 1747 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 RGPD2P0DJD1 1756 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 LOC102724428A0A0B4J2F2 783 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 FAM177BA6PVY3 158 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 C2CD2LO14523 706 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 EREGO14944 169 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 WIPF1O43516 503 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 SMNDC1O75940 238 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 TOMM70O94826 608 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 EPXP11678 715 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 YBX3P16989 372 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 ZNF16P17020 682 aaPredicted RBP4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 SIK1P57059 783 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 DAB2P98082 770 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 MAP3K10Q02779 954 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 PTPN12Q05209 780 aaKnown RBP4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 RNFT1Q5M7Z0 435 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 TREML4Q6UXN2 200 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 PTF1AQ7RTS3 328 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 TMC4Q7Z404 712 aa4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 HDGFL2Q7Z4V5 671 aaPredicted RBP4.35□□□□□ -1.71
RNU1-140P-201ENST00000365040 RAB44Q7Z6P3 723 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms