RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 RRP1BQ14684 758 aaKnown RBP12.79□□□□□ -0.36
SNX6-201ENST00000362031 TSGA10IPQ3SY00 556 aa12.79□□□□□ -0.36
SNX6-201ENST00000362031 MAP1SQ66K74 1059 aaPredicted RBP12.79□□□□□ -0.36
SNX6-201ENST00000362031 MIGA2Q7L4E1 593 aa12.79□□□□□ -0.36
SNX6-201ENST00000362031 FAM83AQ86UY5 434 aa12.79□□□□□ -0.36
SNX6-201ENST00000362031 LAMB1P07942 1786 aa12.79□□□□□ -0.36
SNX6-201ENST00000362031 CHST3Q7LGC8 479 aa12.79□□□□□ -0.36
SNX6-201ENST00000362031 TCEANC2Q96MN5 208 aa12.79□□□□□ -0.36
SNX6-201ENST00000362031 CSRNP1Q96S65 589 aa12.79□□□□□ -0.36
SNX6-201ENST00000362031 GLIS2Q9BZE0 524 aaPredicted RBP12.79□□□□□ -0.36
SNX6-201ENST00000362031 UPF3BQ9BZI7 483 aaKnown RBP12.79□□□□□ -0.36
SNX6-201ENST00000362031 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.79□□□□□ -0.36
SNX6-201ENST00000362031 PCNTO95613 3336 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 JAG1P78504 1218 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 AKNAD1Q5T1N1 836 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 USP48Q86UV5 1035 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 IL17RAQ96F46 866 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 DDRGK1Q96HY6 314 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 UPF2Q9HAU5 1272 aaKnown RBP12.78□□□□□ -0.36
SNX6-201ENST00000362031 SSC5DA1L4H1 1573 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 FGRP09769 529 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 SHMT1P34896 483 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 CDK8P49336 464 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 KRT26Q7Z3Y9 468 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 STAG1Q8WVM7 1258 aa12.78□□□□□ -0.36
SNX6-201ENST00000362031 JAKMIP1Q96N16 626 aaKnown RBP12.78□□□□□ -0.36
SNX6-201ENST00000362031 GPHNQ9NQX3 736 aaPredicted RBP12.78□□□□□ -0.36
SNX6-201ENST00000362031 ROBO3Q96MS0 1386 aa12.77□□□□□ -0.36
SNX6-201ENST00000362031 B4E1Z4 1266 aa12.77□□□□□ -0.37
SNX6-201ENST00000362031 TRAF5O00463 557 aa12.77□□□□□ -0.37
SNX6-201ENST00000362031 ANTXR2P58335 489 aa12.77□□□□□ -0.37
SNX6-201ENST00000362031 FAM47AQ5JRC9 791 aa12.77□□□□□ -0.37
SNX6-201ENST00000362031 RRP12Q5JTH9 1297 aaKnown RBP12.77□□□□□ -0.37
SNX6-201ENST00000362031 C16orf86Q6ZW13 317 aa12.77□□□□□ -0.37
SNX6-201ENST00000362031 CYB5R4Q7L1T6 521 aa12.77□□□□□ -0.37
SNX6-201ENST00000362031 PNMA8AQ86V59 439 aaPredicted RBP12.77□□□□□ -0.37
SNX6-201ENST00000362031 METTL16Q86W50 562 aaKnown RBP12.77□□□□□ -0.37
SNX6-201ENST00000362031 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
SNX6-201ENST00000362031 DCPSQ96C86 337 aaKnown RBP12.77□□□□□ -0.37
SNX6-201ENST00000362031 LRRC2Q9BYS8 371 aa12.77□□□□□ -0.37
SNX6-201ENST00000362031 DHX36Q9H2U1 1008 aaKnown RBP12.77□□□□□ -0.37
SNX6-201ENST00000362031 PI4KBQ9UBF8 816 aa12.77□□□□□ -0.37
SNX6-201ENST00000362031 SERPINB13Q9UIV8 391 aa12.77□□□□□ -0.37
SNX6-201ENST00000362031 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
SNX6-201ENST00000362031 PITPNM2Q9BZ72 1349 aa12.77□□□□□ -0.37
SNX6-201ENST00000362031 COL2A1P02458 1487 aaPredicted RBP12.76□□□□□ -0.37
SNX6-201ENST00000362031 CD2BP2O95400 341 aaKnown RBP12.76□□□□□ -0.37
SNX6-201ENST00000362031 ZKSCAN1P17029 563 aaPredicted RBP12.76□□□□□ -0.37
SNX6-201ENST00000362031 RASA1P20936 1047 aa12.76□□□□□ -0.37
SNX6-201ENST00000362031 MCCP23508 829 aa12.76□□□□□ -0.37
SNX6-201ENST00000362031 RNF20Q5VTR2 975 aa12.76□□□□□ -0.37
SNX6-201ENST00000362031 TTC6Q86TZ1 520 aa12.76□□□□□ -0.37
SNX6-201ENST00000362031 APOBEC3FQ8IUX4 373 aaKnown RBP12.76□□□□□ -0.37
SNX6-201ENST00000362031 MB21D2Q8IYB1 491 aaPredicted RBP12.76□□□□□ -0.37
SNX6-201ENST00000362031 NMT2O60551 498 aa12.76□□□□□ -0.37
SNX6-201ENST00000362031 KDM4AO75164 1064 aa12.76□□□□□ -0.37
SNX6-201ENST00000362031 CASTP20810 708 aaKnown RBP12.76□□□□□ -0.37
SNX6-201ENST00000362031 ANAPC15P60006 121 aa12.76□□□□□ -0.37
SNX6-201ENST00000362031 TNFAIP1Q13829 316 aa12.76□□□□□ -0.37
SNX6-201ENST00000362031 MFSD6Q6ZSS7 791 aa12.76□□□□□ -0.37
SNX6-201ENST00000362031 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNX6-201ENST00000362031 ZSWIM5Q9P217 1185 aa12.76□□□□□ -0.37
SNX6-201ENST00000362031 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.76□□□□□ -0.37
SNX6-201ENST00000362031 KIF3CO14782 793 aa12.75□□□□□ -0.37
SNX6-201ENST00000362031 TNNI2P48788 182 aa12.75□□□□□ -0.37
SNX6-201ENST00000362031 SULF1Q8IWU6 871 aa12.75□□□□□ -0.37
SNX6-201ENST00000362031 NEK1Q96PY6 1258 aa12.75□□□□□ -0.37
SNX6-201ENST00000362031 ZKSCAN3Q9BRR0 538 aa12.75□□□□□ -0.37
SNX6-201ENST00000362031 LARP6Q9BRS8 491 aaKnown RBP12.75□□□□□ -0.37
SNX6-201ENST00000362031 ANP32EQ9BTT0 268 aa12.75□□□□□ -0.37
SNX6-201ENST00000362031 EHD4Q9H223 541 aa12.75□□□□□ -0.37
SNX6-201ENST00000362031 SENP2Q9HC62 589 aa12.75□□□□□ -0.37
SNX6-201ENST00000362031 ZSWIM6Q9HCJ5 1215 aa12.75□□□□□ -0.37
SNX6-201ENST00000362031 TOMM22Q9NS69 142 aa12.75□□□□□ -0.37
SNX6-201ENST00000362031 PHF20L1A8MW92 1017 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 ORC4O43929 436 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 EIF5BO60841 1220 aaKnown RBP12.74□□□□□ -0.37
SNX6-201ENST00000362031 HLA-DOAP06340 250 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 AKR1B1P15121 316 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 EXOSC10Q01780 885 aaKnown RBP12.74□□□□□ -0.37
SNX6-201ENST00000362031 MAP3K10Q02779 954 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 PRKG1Q13976 671 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 MOB2Q70IA6 237 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 CLEC10AQ8IUN9 316 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 GPBP1L1Q9HC44 474 aaPredicted RBP12.74□□□□□ -0.37
SNX6-201ENST00000362031 RANBP6O60518 1105 aaKnown RBP12.74□□□□□ -0.37
SNX6-201ENST00000362031 GDF11O95390 407 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 TATDN1Q6P1N9 297 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 FOXP4Q8IVH2 680 aaPredicted RBP12.74□□□□□ -0.37
SNX6-201ENST00000362031 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNX6-201ENST00000362031 IL17RBQ9NRM6 502 aa12.74□□□□□ -0.37
SNX6-201ENST00000362031 RPS6KB1P23443 525 aa12.73□□□□□ -0.37
SNX6-201ENST00000362031 RUFY3Q7L099 469 aa12.73□□□□□ -0.37
SNX6-201ENST00000362031 LDHDQ86WU2 507 aa12.73□□□□□ -0.37
SNX6-201ENST00000362031 AMOTL1Q8IY63 956 aa12.73□□□□□ -0.37
SNX6-201ENST00000362031 CRACR2BQ8N4Y2 399 aaPredicted RBP12.73□□□□□ -0.37
SNX6-201ENST00000362031 NCOA7Q8NI08 942 aa12.73□□□□□ -0.37
SNX6-201ENST00000362031 TTC14Q96N46 770 aa12.73□□□□□ -0.37
SNX6-201ENST00000362031 TM6SF1Q9BZW5 370 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 339.5 ms