RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 NPHP3Q7Z494 1330 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 EEF1B2P24534 225 aaKnown RBP9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 BIRC3Q13489 604 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 ZGPATQ8N5A5 531 aaKnown RBP9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 ZBBXA8MT70 800 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 PDS5BQ9NTI5 1447 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 SMTNP53814 917 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 FNBP1Q96RU3 617 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 AMOTL2Q9Y2J4 779 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 ERICH3Q5RHP9 1530 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 LDHCP07864 332 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 ZBTB9Q96C00 473 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 TYW1Q9NV66 732 aaKnown RBP9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 IPO11Q9UI26 975 aaKnown RBP9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 TTLL3Q9Y4R7 772 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 GOLGA8CPA6NN73 597 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 CCDC13Q8IYE1 715 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 NUP58Q9BVL2 599 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 NBPF3Q9H094 633 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 XRCC6P12956 609 aaKnown RBP eCLIP9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 ENAHQ8N8S7 591 aaPredicted RBP9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 SMARCA5O60264 1052 aaPredicted RBP9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 TBC1D32Q96NH3 1257 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 MAFGO15525 162 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 ESCO1Q5FWF5 840 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 FLOT2Q14254 428 aa9.3□□□□□ -0.92
NCKAP1-202ENST00000361354 IQUBQ8NA54 791 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 NOC4LQ9BVI4 516 aaKnown RBP9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 SKIP12755 728 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 KRT8P05787 483 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 CCDC152Q4G0S7 254 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 CAPS2Q9BXY5 557 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 SUFUQ9UMX1 484 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 CALUO43852 315 aaPredicted RBP9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 WBP4O75554 376 aaKnown RBP9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 SUN1O94901 812 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 F13A1P00488 732 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 GRK7Q8WTQ7 553 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 IQCDQ96DY2 449 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 CDC5LQ99459 802 aaKnown RBP9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 ZRANB1Q9UGI0 708 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 ASIC2Q16515 512 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 ZNF449Q6P9G9 518 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 VPS37BQ9H9H4 285 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 LRPPRCP42704 1394 aaKnown RBP9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 DCUN1D2Q6PH85 259 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 TNFAIP3P21580 790 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 NUCB1Q02818 461 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 GNA11P29992 359 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 ERBINQ96RT1 1412 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 GNGT2O14610 69 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 MYL5Q02045 173 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 ANGPTL2Q9UKU9 493 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 FAM135AQ9P2D6 1515 aa9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 DDX41Q9UJV9 622 aaKnown RBP9.29□□□□□ -0.92
NCKAP1-202ENST00000361354 KLF18A0A0U1RQI7 1052 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 PIP4K2CQ8TBX8 421 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 N4BP2L2Q92802 583 aaPredicted RBP9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 NMIQ13287 307 aaPredicted RBP9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 BRD3Q15059 726 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 CWF19L2Q2TBE0 894 aaKnown RBP9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 IMPACTQ9P2X3 320 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 GTPBP10A4D1E9 387 aaKnown RBP9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 IL1RL1Q01638 556 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 TSC22D3Q99576 134 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 NACA2Q9H009 215 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 ECHDC1Q9NTX5 307 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 TTC19Q6DKK2 380 aaPredicted RBP9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 GNGT1P63211 74 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 PPP2R5AQ15172 486 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 GJC2Q5T442 439 aaPredicted RBP9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 ATL3Q6DD88 541 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 EFCAB13Q8IY85 973 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 RSAD2Q8WXG1 361 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 MAP3K7O43318 606 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 SLC9C1Q4G0N8 1177 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 PEX26Q7Z412 305 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 THAP12O43422 761 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 CDAN1Q8IWY9 1227 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 ZNF277Q9NRM2 450 aaPredicted RBP9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 CADPSQ9ULU8 1353 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 CCDC141Q6ZP82 1450 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 FGD6Q6ZV73 1430 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 VTI1AQ96AJ9 217 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 KRT4P19013 534 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 LIG3P49916 1009 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 ANKRD35Q8N283 1001 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 SCYL1Q96KG9 808 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 RRP36Q96EU6 259 aaKnown RBP9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 TMTC3Q6ZXV5 915 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 TRIM42Q8IWZ5 723 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 OGFOD1Q8N543 542 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 ANKRD42Q8N9B4 389 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 LRRC8CQ8TDW0 803 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 HAND2P61296 217 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 KRT82Q9NSB4 513 aa9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 BAZ2BQ9UIF8 2168 aaKnown RBP9.28□□□□□ -0.92
NCKAP1-202ENST00000361354 ARHGAP6O43182 974 aa9.27□□□□□ -0.92
NCKAP1-202ENST00000361354 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms