RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 PKP1Q13835 747 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 SOGA3Q5TF21 947 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 IQCA1Q86XH1 822 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 MYLK4Q86YV6 388 aaPredicted RBP11.24□□□□□ -0.61
SIN3A-201ENST00000360439 MED4Q9NPJ6 270 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 MAFGO15525 162 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 DOK7Q18PE1 504 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 ARMC3Q5W041 872 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 HOOK3Q86VS8 718 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 INCENPQ9NQS7 918 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 RPS6KB1P23443 525 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 WASF1Q92558 559 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 CLSTN2Q9H4D0 955 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 ATP10DQ9P241 1426 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 KDRP35968 1356 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 TSPY2A6NKD2 308 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 PCCAP05165 728 aaPredicted RBP11.23□□□□□ -0.61
SIN3A-201ENST00000360439 CEP135Q66GS9 1140 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 ELP1O95163 1332 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 PRKG1Q13976 671 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 DIXDC1Q155Q3 683 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 MAP7D1Q3KQU3 841 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 DALRD3Q5D0E6 543 aaKnown RBP11.23□□□□□ -0.61
SIN3A-201ENST00000360439 NBPF10Q6P3W6 841 aaKnown RBP11.23□□□□□ -0.61
SIN3A-201ENST00000360439 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.23□□□□□ -0.61
SIN3A-201ENST00000360439 SLC4A4Q9Y6R1 1079 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 DENND2AQ9ULE3 1009 aa11.23□□□□□ -0.61
SIN3A-201ENST00000360439 H7C1D1 291 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 PHACTR2O75167 634 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 PDE4BQ07343 736 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 CKAP2LQ8IYA6 745 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 LSG1Q9H089 658 aaKnown RBP11.22□□□□□ -0.61
SIN3A-201ENST00000360439 ZSWIM6Q9HCJ5 1215 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 ZSCAN12O43309 604 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 GADD45BO75293 160 aaPredicted RBP11.22□□□□□ -0.61
SIN3A-201ENST00000360439 SFPQP23246 707 aaKnown RBP eCLIP11.22□□□□□ -0.612e-7■■■■□ 20.4
SIN3A-201ENST00000360439 GTF2IP78347 998 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 MAGEB6Q8N7X4 407 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 RNF41Q9H4P4 317 aaPredicted RBP11.22□□□□□ -0.61
SIN3A-201ENST00000360439 PAG1Q9NWQ8 432 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 ERCC3P19447 782 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 CEBPZQ03701 1054 aaKnown RBP11.22□□□□□ -0.61
SIN3A-201ENST00000360439 SEPT7Q16181 437 aaKnown RBP11.22□□□□□ -0.61
SIN3A-201ENST00000360439 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
SIN3A-201ENST00000360439 CCDC82Q8N4S0 544 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 CTCFLQ8NI51 663 aaPredicted RBP11.22□□□□□ -0.61
SIN3A-201ENST00000360439 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 DACT1Q9NYF0 836 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 NARFQ9UHQ1 456 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 STX8Q9UNK0 236 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 GOLGA6L9A6NEM1 432 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 RPSAP08865 295 aaKnown RBP11.22□□□□□ -0.61
SIN3A-201ENST00000360439 TNNI2P48788 182 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 MCM6Q14566 821 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 MCMDC2Q4G0Z9 681 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 USP44Q9H0E7 712 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 PALD1Q9ULE6 856 aa11.22□□□□□ -0.61
SIN3A-201ENST00000360439 EBAG9O00559 213 aa11.21□□□□□ -0.61
SIN3A-201ENST00000360439 SLC27A2O14975 620 aa11.21□□□□□ -0.61
SIN3A-201ENST00000360439 TRAF1Q13077 416 aa11.21□□□□□ -0.61
SIN3A-201ENST00000360439 POLA2Q14181 598 aa11.21□□□□□ -0.61
SIN3A-201ENST00000360439 HLFQ16534 295 aa11.21□□□□□ -0.61
SIN3A-201ENST00000360439 CCDC70Q6NSX1 233 aa11.21□□□□□ -0.61
SIN3A-201ENST00000360439 TTLL6Q8N841 843 aa11.21□□□□□ -0.61
SIN3A-201ENST00000360439 TRIM11Q96F44 468 aa11.21□□□□□ -0.61
SIN3A-201ENST00000360439 XAGE2Q96GT9 111 aa11.21□□□□□ -0.61
SIN3A-201ENST00000360439 DNAI2Q9GZS0 605 aa11.21□□□□□ -0.61
SIN3A-201ENST00000360439 GREM2Q9H772 168 aa11.21□□□□□ -0.61
SIN3A-201ENST00000360439 MAGEB6P1A0A0J9YX57 407 aa11.21□□□□□ -0.62
SIN3A-201ENST00000360439 ENO4A6NNW6 628 aa11.21□□□□□ -0.62
SIN3A-201ENST00000360439 PPEF1O14829 653 aaPredicted RBP11.21□□□□□ -0.62
SIN3A-201ENST00000360439 SERPINC1P01008 464 aa11.21□□□□□ -0.62
SIN3A-201ENST00000360439 CYP19A1P11511 503 aaPredicted RBP11.21□□□□□ -0.62
SIN3A-201ENST00000360439 KCNG4Q8TDN1 519 aa11.21□□□□□ -0.62
SIN3A-201ENST00000360439 ERVV-1B6SEH8 477 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 ADRA2BP18089 450 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 PIM2Q9P1W9 311 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 ZFYP08048 801 aaPredicted RBP11.2□□□□□ -0.62
SIN3A-201ENST00000360439 MAGEA9P43362 315 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 CCDC186Q7Z3E2 898 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 NECAB1Q8N987 351 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 FSIP1Q8NA03 581 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 LPIN2Q92539 896 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 DBNDD2Q9BQY9 259 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 IQCGQ9H095 443 aaKnown RBP11.2□□□□□ -0.62
SIN3A-201ENST00000360439 MCM9Q9NXL9 1143 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 ATP2C2O75185 946 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 PLCG2P16885 1265 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 RWDD2BP57060 319 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 ELF2Q15723 593 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 NLRP10Q86W26 655 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 SMARCE1Q969G3 411 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 C21orf2O43822 256 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 CDC25BP30305 580 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 ILDR1Q86SU0 546 aaPredicted RBP11.2□□□□□ -0.62
SIN3A-201ENST00000360439 MROH5Q6ZUA9 1318 aa11.2□□□□□ -0.62
SIN3A-201ENST00000360439 GOLGA6L7A0A1B0GV03 622 aa11.19□□□□□ -0.62
SIN3A-201ENST00000360439 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
SIN3A-201ENST00000360439 BEND3Q5T5X7 828 aa11.19□□□□□ -0.62
SIN3A-201ENST00000360439 SUSD4Q5VX71 490 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms