RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 LMNB1P20700 586 aa21.92■■□□□ 1.1
CLN3-206ENST00000360019 EVCP57679 992 aa21.92■■□□□ 1.1
CLN3-206ENST00000360019 TMEM87BQ96K49 555 aa21.92■■□□□ 1.1
CLN3-206ENST00000360019 IDI2Q9BXS1 227 aa21.92■■□□□ 1.1
CLN3-206ENST00000360019 OSBPL5Q9H0X9 879 aaPredicted RBP21.92■■□□□ 1.1
CLN3-206ENST00000360019 TDRD3Q9H7E2 651 aaKnown RBP21.92■■□□□ 1.1
CLN3-206ENST00000360019 ANGEL1Q9UNK9 670 aaKnown RBP21.92■■□□□ 1.1
CLN3-206ENST00000360019 EIF6P56537 245 aaKnown RBP21.92■■□□□ 1.1
CLN3-206ENST00000360019 PDE4BQ07343 736 aa21.92■■□□□ 1.1
CLN3-206ENST00000360019 STK3Q13188 491 aa21.92■■□□□ 1.1
CLN3-206ENST00000360019 ZNF541Q9H0D2 1346 aa21.92■■□□□ 1.1
CLN3-206ENST00000360019 SHTN1A0MZ66 631 aa21.91■■□□□ 1.1
CLN3-206ENST00000360019 ZKSCAN3Q9BRR0 538 aa21.91■■□□□ 1.1
CLN3-206ENST00000360019 LY9Q9HBG7 655 aa21.91■■□□□ 1.1
CLN3-206ENST00000360019 SENP2Q9HC62 589 aa21.91■■□□□ 1.1
CLN3-206ENST00000360019 FAM198AQ9UFP1 575 aa21.91■■□□□ 1.1
CLN3-206ENST00000360019 BRPF3Q9ULD4 1205 aa21.91■■□□□ 1.1
CLN3-206ENST00000360019 SBF1O95248 1867 aa21.91■■□□□ 1.1
CLN3-206ENST00000360019 RANBP6O60518 1105 aaKnown RBP21.9■■□□□ 1.1
CLN3-206ENST00000360019 DLGAP5Q15398 846 aa21.9■■□□□ 1.1
CLN3-206ENST00000360019 ZFPM1Q8IX07 1006 aa21.9■■□□□ 1.1
CLN3-206ENST00000360019 SLC44A5Q8NCS7 719 aa21.9■■□□□ 1.1
CLN3-206ENST00000360019 GTF3C6Q969F1 213 aa21.9■■□□□ 1.1
CLN3-206ENST00000360019 DICER1Q9UPY3 1922 aaKnown RBP21.9■■□□□ 1.1
CLN3-206ENST00000360019 IFIT3O14879 490 aaKnown RBP21.9■■□□□ 1.1
CLN3-206ENST00000360019 RPS12P25398 132 aaKnown RBP21.9■■□□□ 1.1
CLN3-206ENST00000360019 PDIA3P30101 505 aaKnown RBP21.9■■□□□ 1.1
CLN3-206ENST00000360019 TMEM67Q5HYA8 995 aa21.9■■□□□ 1.1
CLN3-206ENST00000360019 C16orf86Q6ZW13 317 aa21.9■■□□□ 1.1
CLN3-206ENST00000360019 MTMR14Q8NCE2 650 aa21.9■■□□□ 1.1
CLN3-206ENST00000360019 ZNF274Q96GC6 653 aaPredicted RBP21.9■■□□□ 1.1
CLN3-206ENST00000360019 PFKFB2O60825 505 aa21.89■■□□□ 1.09
CLN3-206ENST00000360019 MTA3Q9BTC8 594 aa21.89■■□□□ 1.09
CLN3-206ENST00000360019 CWC22Q9HCG8 908 aaKnown RBP21.89■■□□□ 1.09
CLN3-206ENST00000360019 CHMP5Q9NZZ3 219 aa21.89■■□□□ 1.09
CLN3-206ENST00000360019 GJA3Q9Y6H8 435 aa21.89■■□□□ 1.09
CLN3-206ENST00000360019 KLF18A0A0U1RQI7 1052 aa21.88■■□□□ 1.09
CLN3-206ENST00000360019 NPM3O75607 178 aaKnown RBP21.88■■□□□ 1.09
CLN3-206ENST00000360019 GMPSP49915 693 aaPredicted RBP21.88■■□□□ 1.09
CLN3-206ENST00000360019 SCRN1Q12765 414 aa21.88■■□□□ 1.09
CLN3-206ENST00000360019 FAM47AQ5JRC9 791 aa21.88■■□□□ 1.09
CLN3-206ENST00000360019 ZBED3Q96IU2 234 aaPredicted RBP21.88■■□□□ 1.09
CLN3-206ENST00000360019 DTNBO60941 627 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 LIFRP42702 1097 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 ZNF280AP59817 542 aaPredicted RBP21.87■■□□□ 1.09
CLN3-206ENST00000360019 TCP10Q12799 353 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 TTC6Q86TZ1 520 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 SGMS1Q86VZ5 419 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 MYOZ2Q9NPC6 264 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 CIZ1Q9ULV3 898 aaPredicted RBP21.87■■□□□ 1.09
CLN3-206ENST00000360019 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.87■■□□□ 1.09
CLN3-206ENST00000360019 TNKSO95271 1327 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 CDK8P49336 464 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 GABPAQ06546 454 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 SART3Q15020 963 aaKnown RBP21.87■■□□□ 1.09
CLN3-206ENST00000360019 DPF2Q92785 391 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 UBAC1Q9BSL1 405 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 MKNK2Q9HBH9 465 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 NAP1L2Q9ULW6 460 aaPredicted RBP21.87■■□□□ 1.09
CLN3-206ENST00000360019 HPS5Q9UPZ3 1129 aa21.87■■□□□ 1.09
CLN3-206ENST00000360019 CLRN2A0PK11 232 aa21.86■■□□□ 1.09
CLN3-206ENST00000360019 RASA1P20936 1047 aa21.86■■□□□ 1.09
CLN3-206ENST00000360019 SEC23AQ15436 765 aa21.86■■□□□ 1.09
CLN3-206ENST00000360019 SH3BP5LQ7L8J4 393 aa21.86■■□□□ 1.09
CLN3-206ENST00000360019 ZSCAN10Q96SZ4 725 aaPredicted RBP21.86■■□□□ 1.09
CLN3-206ENST00000360019 ZNF70Q9UC06 446 aaPredicted RBP21.86■■□□□ 1.09
CLN3-206ENST00000360019 GOLGA8BA8MQT2 603 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 NT5C2P49902 561 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 MMP14P50281 582 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 CCT2P78371 535 aaKnown RBP21.85■■□□□ 1.09
CLN3-206ENST00000360019 WTAPQ15007 396 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 SPDYE2Q495Y8 402 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 IQCA1Q86XH1 822 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 ERICH2A1L162 156 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 DDTLA6NHG4 134 aaPredicted RBP21.85■■□□□ 1.09
CLN3-206ENST00000360019 TSPY2A6NKD2 308 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 WNT10BO00744 389 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 NMT2O60551 498 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 ENTPD3O75355 529 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 EGFRP00533 1210 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 APOA5Q6Q788 366 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 MICALL2Q8IY33 904 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 ENAHQ8N8S7 591 aaPredicted RBP21.85■■□□□ 1.09
CLN3-206ENST00000360019 ZNF287Q9HBT7 754 aa21.85■■□□□ 1.09
CLN3-206ENST00000360019 TFAP4Q01664 338 aa21.84■■□□□ 1.09
CLN3-206ENST00000360019 NBPF9Q3BBW0 867 aa21.84■■□□□ 1.09
CLN3-206ENST00000360019 NFXL1Q6ZNB6 911 aa21.84■■□□□ 1.09
CLN3-206ENST00000360019 RAB11FIP4Q86YS3 637 aa21.84■■□□□ 1.09
CLN3-206ENST00000360019 DHX36Q9H2U1 1008 aaKnown RBP21.84■■□□□ 1.09
CLN3-206ENST00000360019 NCOA5Q9HCD5 579 aaKnown RBP21.84■■□□□ 1.09
CLN3-206ENST00000360019 TMOD2Q9NZR1 351 aa21.84■■□□□ 1.09
CLN3-206ENST00000360019 SERPINB13Q9UIV8 391 aa21.84■■□□□ 1.09
CLN3-206ENST00000360019 SMC3Q9UQE7 1217 aa21.84■■□□□ 1.09
CLN3-206ENST00000360019 SIPA1L1O43166 1804 aa21.84■■□□□ 1.09
CLN3-206ENST00000360019 HLA-DOAP06340 250 aa21.83■■□□□ 1.09
CLN3-206ENST00000360019 PKP1Q13835 747 aa21.83■■□□□ 1.09
CLN3-206ENST00000360019 ZNF444Q8N0Y2 327 aaPredicted RBP21.83■■□□□ 1.09
CLN3-206ENST00000360019 CNOT7Q9UIV1 285 aaKnown RBP21.83■■□□□ 1.09
CLN3-206ENST00000360019 TCP10L2B9ZVM9 353 aa21.83■■□□□ 1.08
CLN3-206ENST00000360019 EHD4Q9H223 541 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms