RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 PFKFB1P16118 471 aa12.84□□□□□ -0.35
SEPSECS-201ENST00000358971 GNPTABQ3T906 1256 aa12.84□□□□□ -0.35
SEPSECS-201ENST00000358971 LONRF3Q496Y0 759 aa12.84□□□□□ -0.35
SEPSECS-201ENST00000358971 LINC00301Q8NCQ3 95 aa12.84□□□□□ -0.35
SEPSECS-201ENST00000358971 EZH1Q92800 747 aaPredicted RBP12.84□□□□□ -0.35
SEPSECS-201ENST00000358971 RRP36Q96EU6 259 aaKnown RBP12.84□□□□□ -0.35
SEPSECS-201ENST00000358971 C19orf44Q9H6X5 657 aa12.84□□□□□ -0.35
SEPSECS-201ENST00000358971 FAM184BQ9ULE4 1060 aa12.84□□□□□ -0.35
SEPSECS-201ENST00000358971 HSF2BPO75031 334 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 SRGAP2O75044 1071 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 USP4Q13107 963 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 TTMPQ5BVD1 217 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 FKBP15Q5T1M5 1219 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 C1QTNF12Q5T7M4 302 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 MSL1Q68DK7 614 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 TRIM58Q8NG06 486 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 MYCBPAPQ8TBZ2 947 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 KCNG4Q8TDN1 519 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 RNPC3Q96LT9 517 aaKnown RBP12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 PANX2Q96RD6 677 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 NOD2Q9HC29 1040 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 RTEL1Q9NZ71 1219 aa12.83□□□□□ -0.35
SEPSECS-201ENST00000358971 UGGT1Q9NYU2 1555 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 TARSL2A2RTX5 802 aaKnown RBP12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 PPFIA2O75334 1257 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 PPARDQ03181 441 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 NNTQ13423 1086 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 CCDC70Q6NSX1 233 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 RASGRP2Q7LDG7 609 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 B4GALNT2Q8NHY0 566 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 LMCD1Q9NZU5 365 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 NFE2L3Q9Y4A8 694 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 VWDEQ8N2E2 1590 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 ATP10BO94823 1461 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 DNM1LO00429 736 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 CHL1O00533 1208 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 SETSIPP0DME0 302 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 SYKP43405 635 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 HHATQ5VTY9 493 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 NECTIN2Q92692 538 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 GUCA1BQ9UMX6 200 aa12.83□□□□□ -0.36
SEPSECS-201ENST00000358971 PPP1R37O75864 691 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 AMPD2Q01433 879 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 RBL2Q08999 1139 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 MTA1Q13330 715 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 PTGISQ16647 500 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 SSH3Q8TE77 659 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 PUS7Q96PZ0 661 aaKnown RBP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 OSBPL9Q96SU4 736 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 PAGR1Q9BTK6 254 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 NAA15Q9BXJ9 866 aaKnown RBP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 ALDH8A1Q9H2A2 487 aaPredicted RBP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 SENP3Q9H4L4 574 aaPredicted RBP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 EMILIN1Q9Y6C2 1016 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 PAPOLAP51003 745 aaKnown RBP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 NSUN7Q8NE18 718 aaKnown RBP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 NEK1Q96PY6 1258 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 AHCYL1O43865 530 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 SMNDC1O75940 238 aaKnown RBP eCLIP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 ECEL1O95672 775 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 HIBCHQ6NVY1 386 aaPredicted RBP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 HDGFL2Q7Z4V5 671 aaPredicted RBP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 CUL5Q93034 780 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 NUP58Q9BVL2 599 aa12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 C14orf93Q9H972 538 aaKnown RBP12.82□□□□□ -0.36
SEPSECS-201ENST00000358971 ERICH2A1L162 156 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 ANP32DO95626 131 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 ATP6V1G2O95670 118 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 MARCKSP29966 332 aaPredicted RBP12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 TRMT44Q8IYL2 757 aaKnown RBP12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 EVI5LQ96CN4 794 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 TSC22D3Q99576 134 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 TSGA10Q9BZW7 698 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 PAPOLBQ9NRJ5 636 aaKnown RBP12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 C15orf41Q9Y2V0 281 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 SAR1BQ9Y6B6 198 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 ASXL2Q76L83 1435 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 SETD1AO15047 1707 aaKnown RBP12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 ARHGAP5Q13017 1502 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 FESP07332 822 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 MYBL1P10243 752 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 APBA1Q02410 837 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 PPP1R7Q15435 360 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 SPRED3Q2MJR0 410 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 CLASRPQ8N2M8 674 aaKnown RBP12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 OSBPL7Q9BZF2 842 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 ECHDC1Q9NTX5 307 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 TUBE1Q9UJT0 475 aa12.81□□□□□ -0.36
SEPSECS-201ENST00000358971 FAM107AO95990 144 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 PDE4BQ07343 736 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 OTUD7BQ6GQQ9 843 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 BRAPQ7Z569 592 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 EHBP1Q8NDI1 1231 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 GPATCH3Q96I76 525 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 LLPHQ9BRT6 129 aaKnown RBP12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 MYO1AQ9UBC5 1043 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms