RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 MON2Q7Z3U7 1717 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 CCDC196A0A1B0GTZ2 297 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 IRS4O14654 1257 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 PRKAB2O43741 272 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 TADA3O75528 432 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 NLRP5P59047 1200 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 DNAJC21Q5F1R6 531 aaKnown RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 USP49Q70CQ1 688 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 DNAJC10Q8IXB1 793 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 C19orf44Q9H6X5 657 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 FHOD1Q9Y613 1164 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 RICTORQ6R327 1708 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 SYNRGQ9UMZ2 1314 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 H7C1W4 665 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 ZMYND10O75800 440 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 PDE6AP16499 860 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 CASP14P31944 242 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 GUCY1A2P33402 732 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 MCM7P33993 719 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 FMR1Q06787 632 aaKnown RBP eCLIP7.47□□□□□ -1.217e-7■■■■□ 24.8
CSDE1-203ENST00000358528 RBL2Q08999 1139 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 NCAPHQ15003 741 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 ENOX2Q16206 610 aaKnown RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 CCDC70Q6NSX1 233 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 CC2D1AQ6P1N0 951 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 MLKLQ8NB16 471 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 CCDC148Q8NFR7 591 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 RUFY1Q96T51 708 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 CRACR2AQ9BSW2 395 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 CSRNP2Q9H175 543 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 GREM2Q9H772 168 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 JADE2Q9NQC1 790 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 HPS5Q9UPZ3 1129 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 V9GY48 417 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.46□□□□□ -1.21
CSDE1-203ENST00000358528 ENC1O14682 589 aa7.46□□□□□ -1.21
CSDE1-203ENST00000358528 STARD3NLO95772 234 aa7.46□□□□□ -1.21
CSDE1-203ENST00000358528 CYP7A1P22680 504 aa7.46□□□□□ -1.21
CSDE1-203ENST00000358528 CDC25AP30304 524 aa7.46□□□□□ -1.21
CSDE1-203ENST00000358528 TXLNAP40222 546 aa7.46□□□□□ -1.21
CSDE1-203ENST00000358528 MCAMP43121 646 aa7.46□□□□□ -1.21
CSDE1-203ENST00000358528 UBXN1Q04323 297 aa7.46□□□□□ -1.21
CSDE1-203ENST00000358528 SLC35F6Q8N357 371 aa7.46□□□□□ -1.21
CSDE1-203ENST00000358528 RGS22Q8NE09 1264 aa7.46□□□□□ -1.21
CSDE1-203ENST00000358528 EPSTI1Q96J88 318 aa7.46□□□□□ -1.21
CSDE1-203ENST00000358528 ZSWIM5Q9P217 1185 aa7.46□□□□□ -1.21
CSDE1-203ENST00000358528 UTYO14607 1347 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 RIMBP3CA6NJZ7 1639 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 RIMBP3BA6NNM3 1639 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 RIMBP3Q9UFD9 1639 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 SPATA31D1Q6ZQQ2 1576 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 DIP2BQ9P265 1576 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 STX10O60499 249 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 TFRCP02786 760 aaKnown RBP7.46□□□□□ -1.22
CSDE1-203ENST00000358528 RABL6Q3YEC7 729 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-203ENST00000358528 RILPL1Q5EBL4 403 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 CERS3Q8IU89 383 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 CEP112Q8N8E3 955 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 TMEM87BQ96K49 555 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 SUGCTQ9HAC7 445 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 PIH1D3Q9NQM4 214 aaKnown RBP7.46□□□□□ -1.22
CSDE1-203ENST00000358528 ZNHIT6Q9NWK9 470 aaKnown RBP7.46□□□□□ -1.22
CSDE1-203ENST00000358528 JAG2Q9Y219 1238 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 DIP2AQ14689 1571 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 SLC5A1P13866 664 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 ADRA2BP18089 450 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 IBSPP21815 317 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-203ENST00000358528 KRT9P35527 623 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 KANK3Q6NY19 840 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 BICDL1Q6ZP65 573 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 HDXQ7Z353 690 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 DHX37Q8IY37 1157 aaKnown RBP7.46□□□□□ -1.22
CSDE1-203ENST00000358528 OXER1Q8TDS5 423 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 SDR42E1Q8WUS8 393 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 SMARCC1Q92922 1105 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-203ENST00000358528 PSMB7Q99436 277 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 DEF6Q9H4E7 631 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 L2HGDHQ9H9P8 463 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 PARP3Q9Y6F1 533 aa7.46□□□□□ -1.22
CSDE1-203ENST00000358528 NEDD4P46934 1319 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 SH2B2O14492 632 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-203ENST00000358528 PPP6R2O75170 966 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 H2AFXP16104 143 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-203ENST00000358528 PDE4CQ08493 712 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 REXO1L1PQ8IX06 675 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 KRT23Q9C075 422 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 CENPHQ9H3R5 247 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 MARCH6O60337 910 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 CTR9Q6PD62 1173 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 CATIPQ7Z7H3 387 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 IFNL3Q8IZI9 196 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 TRIM47Q96LD4 638 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 GBP3Q9H0R5 595 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 RASSF4Q9H2L5 321 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 MRPL44Q9H9J2 332 aaKnown RBP7.45□□□□□ -1.22
CSDE1-203ENST00000358528 FAN1Q9Y2M0 1017 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 ANKARQ7Z5J8 1434 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 MACROD2A1Z1Q3 448 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 FAM205CA6NFA0 338 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 RAD21O60216 631 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms