RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 PKP1Q13835 747 aa20.06■□□□□ 0.8
TPM1-205ENST00000357980 TMEM67Q5HYA8 995 aa20.06■□□□□ 0.8
TPM1-205ENST00000357980 SENP2Q9HC62 589 aa20.06■□□□□ 0.8
TPM1-205ENST00000357980 SMC3Q9UQE7 1217 aa20.06■□□□□ 0.8
TPM1-205ENST00000357980 UTRNP46939 3433 aa20.06■□□□□ 0.8
TPM1-205ENST00000357980 DICER1Q9UPY3 1922 aaKnown RBP20.06■□□□□ 0.8
TPM1-205ENST00000357980 KLF18A0A0U1RQI7 1052 aa20.06■□□□□ 0.8
TPM1-205ENST00000357980 IFIT3O14879 490 aaKnown RBP20.06■□□□□ 0.8
TPM1-205ENST00000357980 AGBL3Q8NEM8 1001 aa20.06■□□□□ 0.8
TPM1-205ENST00000357980 DYNLL2Q96FJ2 89 aa20.06■□□□□ 0.8
TPM1-205ENST00000357980 HPS5Q9UPZ3 1129 aa20.06■□□□□ 0.8
TPM1-205ENST00000357980 NT5C2P49902 561 aa20.05■□□□□ 0.8
TPM1-205ENST00000357980 RBM5P52756 815 aaKnown RBP eCLIP20.05■□□□□ 0.8
TPM1-205ENST00000357980 NUCB2P80303 420 aa20.05■□□□□ 0.8
TPM1-205ENST00000357980 SART3Q15020 963 aaKnown RBP20.05■□□□□ 0.8
TPM1-205ENST00000357980 CFAP100Q494V2 611 aa20.05■□□□□ 0.8
TPM1-205ENST00000357980 ZBTB12Q9Y330 459 aaPredicted RBP20.05■□□□□ 0.8
TPM1-205ENST00000357980 RANBP6O60518 1105 aaKnown RBP20.04■□□□□ 0.8
TPM1-205ENST00000357980 GJB2P29033 226 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 NFIAQ12857 509 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 PICALMQ13492 652 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 SEC23AQ15436 765 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 CIAPIN1Q6FI81 312 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 APOA5Q6Q788 366 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 ZKSCAN3Q9BRR0 538 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 SBF1O95248 1867 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 SIPA1L1O43166 1804 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 GOLGA8BA8MQT2 603 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 C16orf86Q6ZW13 317 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 UBAC1Q9BSL1 405 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 IDI2Q9BXS1 227 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 OSBPL5Q9H0X9 879 aaPredicted RBP20.04■□□□□ 0.8
TPM1-205ENST00000357980 NCOA5Q9HCD5 579 aaKnown RBP20.04■□□□□ 0.8
TPM1-205ENST00000357980 ZDHHC9Q9Y397 364 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 MYH8P13535 1937 aa20.04■□□□□ 0.8
TPM1-205ENST00000357980 DTNBO60941 627 aa20.03■□□□□ 0.8
TPM1-205ENST00000357980 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
TPM1-205ENST00000357980 CCT2P78371 535 aaKnown RBP20.03■□□□□ 0.8
TPM1-205ENST00000357980 SLC44A5Q8NCS7 719 aa20.03■□□□□ 0.8
TPM1-205ENST00000357980 PRMT6Q96LA8 375 aaPredicted RBP20.03■□□□□ 0.8
TPM1-205ENST00000357980 ZSCAN10Q96SZ4 725 aaPredicted RBP20.03■□□□□ 0.8
TPM1-205ENST00000357980 LLPHQ9BRT6 129 aaKnown RBP20.03■□□□□ 0.8
TPM1-205ENST00000357980 SYT17Q9BSW7 474 aa20.03■□□□□ 0.8
TPM1-205ENST00000357980 NAP1L2Q9ULW6 460 aaPredicted RBP20.03■□□□□ 0.8
TPM1-205ENST00000357980 TNKSO95271 1327 aa20.03■□□□□ 0.8
TPM1-205ENST00000357980 SPDYE2BA6NHP3 402 aa20.02■□□□□ 0.8
TPM1-205ENST00000357980 FZD9O00144 591 aa20.02■□□□□ 0.8
TPM1-205ENST00000357980 CTDNEP1O95476 244 aa20.02■□□□□ 0.8
TPM1-205ENST00000357980 SPDYE6P0CI01 402 aa20.02■□□□□ 0.8
TPM1-205ENST00000357980 WTAPQ15007 396 aa20.02■□□□□ 0.8
TPM1-205ENST00000357980 IQCA1Q86XH1 822 aa20.02■□□□□ 0.8
TPM1-205ENST00000357980 ENAHQ8N8S7 591 aaPredicted RBP20.02■□□□□ 0.8
TPM1-205ENST00000357980 TNPO1Q92973 898 aaKnown RBP20.02■□□□□ 0.8
TPM1-205ENST00000357980 HDAC9Q9UKV0 1011 aa20.02■□□□□ 0.8
TPM1-205ENST00000357980 NID2Q14112 1375 aa20.02■□□□□ 0.8
TPM1-205ENST00000357980 GABPAQ06546 454 aa20.02■□□□□ 0.79
TPM1-205ENST00000357980 TNIP1Q15025 636 aa20.02■□□□□ 0.79
TPM1-205ENST00000357980 OGFOD1Q8N543 542 aa20.02■□□□□ 0.79
TPM1-205ENST00000357980 NSUN7Q8NE18 718 aaKnown RBP20.02■□□□□ 0.79
TPM1-205ENST00000357980 SMARCC2Q8TAQ2 1214 aa20.02■□□□□ 0.79
TPM1-205ENST00000357980 FAM198AQ9UFP1 575 aa20.02■□□□□ 0.79
TPM1-205ENST00000357980 ERICH2A1L162 156 aa20.01■□□□□ 0.79
TPM1-205ENST00000357980 JAK2O60674 1132 aa20.01■□□□□ 0.79
TPM1-205ENST00000357980 BRD1O95696 1058 aa20.01■□□□□ 0.79
TPM1-205ENST00000357980 CACNB3P54284 484 aa20.01■□□□□ 0.79
TPM1-205ENST00000357980 FAM47AQ5JRC9 791 aa20.01■□□□□ 0.79
TPM1-205ENST00000357980 TMTC2Q8N394 836 aa20.01■□□□□ 0.79
TPM1-205ENST00000357980 MTMR14Q8NCE2 650 aa20.01■□□□□ 0.79
TPM1-205ENST00000357980 TDRD3Q9H7E2 651 aaKnown RBP20.01■□□□□ 0.79
TPM1-205ENST00000357980 RASA1P20936 1047 aa20■□□□□ 0.79
TPM1-205ENST00000357980 CDK8P49336 464 aa20■□□□□ 0.79
TPM1-205ENST00000357980 NFXL1Q6ZNB6 911 aa20■□□□□ 0.79
TPM1-205ENST00000357980 TTC6Q86TZ1 520 aa20■□□□□ 0.79
TPM1-205ENST00000357980 ZFPM1Q8IX07 1006 aa20■□□□□ 0.79
TPM1-205ENST00000357980 CHMP4CQ96CF2 233 aa20■□□□□ 0.79
TPM1-205ENST00000357980 MKNK2Q9HBH9 465 aa20■□□□□ 0.79
TPM1-205ENST00000357980 ZNF287Q9HBT7 754 aa20■□□□□ 0.79
TPM1-205ENST00000357980 COL2A1P02458 1487 aaPredicted RBP20■□□□□ 0.79
TPM1-205ENST00000357980 CCDC69A6NI79 296 aa19.99■□□□□ 0.79
TPM1-205ENST00000357980 TSPY2A6NKD2 308 aa19.99■□□□□ 0.79
TPM1-205ENST00000357980 SYT1P21579 422 aa19.99■□□□□ 0.79
TPM1-205ENST00000357980 NFKBIBQ15653 356 aa19.99■□□□□ 0.79
TPM1-205ENST00000357980 RAB11FIP4Q86YS3 637 aa19.99■□□□□ 0.79
TPM1-205ENST00000357980 SLC12A7Q9Y666 1083 aa19.99■□□□□ 0.79
TPM1-205ENST00000357980 ZBTB43O43298 467 aa19.99■□□□□ 0.79
TPM1-205ENST00000357980 RPS12P25398 132 aaKnown RBP19.99■□□□□ 0.79
TPM1-205ENST00000357980 TFAP4Q01664 338 aa19.99■□□□□ 0.79
TPM1-205ENST00000357980 DLGAP5Q15398 846 aa19.99■□□□□ 0.79
TPM1-205ENST00000357980 NMT2O60551 498 aa19.98■□□□□ 0.79
TPM1-205ENST00000357980 METAP2P50579 478 aaKnown RBP eCLIP19.98■□□□□ 0.79
TPM1-205ENST00000357980 RCAN1P53805 252 aa19.98■□□□□ 0.79
TPM1-205ENST00000357980 MICU3Q86XE3 530 aa19.98■□□□□ 0.79
TPM1-205ENST00000357980 ZBED3Q96IU2 234 aaPredicted RBP19.98■□□□□ 0.79
TPM1-205ENST00000357980 MYL10Q9BUA6 226 aa19.98■□□□□ 0.79
TPM1-205ENST00000357980 ATRNL1Q5VV63 1379 aa19.98■□□□□ 0.79
TPM1-205ENST00000357980 PTPDC1A2A3K4 754 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 STX6O43752 255 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 DHX16O60231 1041 aaKnown RBP19.97■□□□□ 0.79
TPM1-205ENST00000357980 MMP14P50281 582 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 TCP10Q12799 353 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms