RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 USP26Q9BXU7 913 aa17.7■□□□□ 0.42
CCNE1-202ENST00000357943 CTNNA3Q9UI47 895 aa17.7■□□□□ 0.42
CCNE1-202ENST00000357943 SERPINB13Q9UIV8 391 aa17.7■□□□□ 0.42
CCNE1-202ENST00000357943 ZNF213O14771 459 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 CYP21A2P08686 494 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 GABPAQ06546 454 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 PRKG1Q13976 671 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 NECTIN1Q15223 517 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 METTL16Q86W50 562 aaKnown RBP17.69■□□□□ 0.42
CCNE1-202ENST00000357943 SLC44A5Q8NCS7 719 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 NBPF3Q9H094 633 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 EHD4Q9H223 541 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 ZNF408Q9H9D4 720 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 IMMTQ16891 758 aaKnown RBP17.69■□□□□ 0.42
CCNE1-202ENST00000357943 FOXP4Q8IVH2 680 aaPredicted RBP17.69■□□□□ 0.42
CCNE1-202ENST00000357943 CRACR2BQ8N4Y2 399 aaPredicted RBP17.69■□□□□ 0.42
CCNE1-202ENST00000357943 BACH2Q9BYV9 841 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 INCENPQ9NQS7 918 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 ANAPC4Q9UJX5 808 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 TACC3Q9Y6A5 838 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 TAF6LQ9Y6J9 622 aa17.69■□□□□ 0.42
CCNE1-202ENST00000357943 SIPA1L1O43166 1804 aa17.68■□□□□ 0.42
CCNE1-202ENST00000357943 ROBO3Q96MS0 1386 aa17.68■□□□□ 0.42
CCNE1-202ENST00000357943 TBC1D12O60347 775 aa17.68■□□□□ 0.42
CCNE1-202ENST00000357943 MAP3K10Q02779 954 aa17.68■□□□□ 0.42
CCNE1-202ENST00000357943 C16orf86Q6ZW13 317 aa17.68■□□□□ 0.42
CCNE1-202ENST00000357943 TBC1D10CQ8IV04 446 aa17.68■□□□□ 0.42
CCNE1-202ENST00000357943 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCNE1-202ENST00000357943 HERC5Q9UII4 1024 aaKnown RBP17.68■□□□□ 0.42
CCNE1-202ENST00000357943 PASKQ96RG2 1323 aa17.67■□□□□ 0.42
CCNE1-202ENST00000357943 SLC27A2O14975 620 aa17.67■□□□□ 0.42
CCNE1-202ENST00000357943 CELF2O95319 508 aaKnown RBP17.67■□□□□ 0.42
CCNE1-202ENST00000357943 NF2P35240 595 aa17.67■□□□□ 0.42
CCNE1-202ENST00000357943 CREB3L3Q68CJ9 461 aa17.67■□□□□ 0.42
CCNE1-202ENST00000357943 HOOK2Q96ED9 719 aa17.67■□□□□ 0.42
CCNE1-202ENST00000357943 EPB41L2O43491 1005 aaKnown RBP17.66■□□□□ 0.42
CCNE1-202ENST00000357943 PRDM1O75626 825 aa17.66■□□□□ 0.42
CCNE1-202ENST00000357943 CDK8P49336 464 aa17.66■□□□□ 0.42
CCNE1-202ENST00000357943 FSTL1Q12841 308 aa17.66■□□□□ 0.42
CCNE1-202ENST00000357943 CST9Q5W186 159 aa17.66■□□□□ 0.42
CCNE1-202ENST00000357943 DCAF15Q66K64 600 aa17.66■□□□□ 0.42
CCNE1-202ENST00000357943 MOB2Q70IA6 237 aa17.66■□□□□ 0.42
CCNE1-202ENST00000357943 TRIM34Q9BYJ4 488 aa17.66■□□□□ 0.42
CCNE1-202ENST00000357943 PHF20L1A8MW92 1017 aa17.65■□□□□ 0.42
CCNE1-202ENST00000357943 PPP1R12BO60237 982 aaPredicted RBP17.65■□□□□ 0.42
CCNE1-202ENST00000357943 EIF5BO60841 1220 aaKnown RBP17.65■□□□□ 0.42
CCNE1-202ENST00000357943 USP2O75604 605 aaPredicted RBP17.65■□□□□ 0.42
CCNE1-202ENST00000357943 SHMT1P34896 483 aa17.65■□□□□ 0.42
CCNE1-202ENST00000357943 HSPA4P34932 840 aa17.65■□□□□ 0.42
CCNE1-202ENST00000357943 RRP1BQ14684 758 aaKnown RBP17.65■□□□□ 0.42
CCNE1-202ENST00000357943 LAMB1P07942 1786 aa17.65■□□□□ 0.42
CCNE1-202ENST00000357943 SLC3A2P08195 630 aaKnown RBP17.65■□□□□ 0.42
CCNE1-202ENST00000357943 AKNAD1Q5T1N1 836 aa17.65■□□□□ 0.42
CCNE1-202ENST00000357943 TATDN1Q6P1N9 297 aa17.65■□□□□ 0.42
CCNE1-202ENST00000357943 RASEFQ8IZ41 740 aa17.65■□□□□ 0.42
CCNE1-202ENST00000357943 STAG1Q8WVM7 1258 aa17.65■□□□□ 0.42
CCNE1-202ENST00000357943 KLRG1Q96E93 195 aa17.65■□□□□ 0.42
CCNE1-202ENST00000357943 ZNF341Q9BYN7 854 aa17.65■□□□□ 0.42
CCNE1-202ENST00000357943 SWAP70Q9UH65 585 aa17.65■□□□□ 0.42
CCNE1-202ENST00000357943 PDE4BQ07343 736 aa17.64■□□□□ 0.41
CCNE1-202ENST00000357943 TTLL12Q14166 644 aaPredicted RBP17.64■□□□□ 0.41
CCNE1-202ENST00000357943 STOX1Q6ZVD7 989 aa17.64■□□□□ 0.41
CCNE1-202ENST00000357943 NKX2-3Q8TAU0 364 aa17.64■□□□□ 0.41
CCNE1-202ENST00000357943 WRNIP1Q96S55 665 aa17.64■□□□□ 0.41
CCNE1-202ENST00000357943 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
CCNE1-202ENST00000357943 ANGEL1Q9UNK9 670 aaKnown RBP17.64■□□□□ 0.41
CCNE1-202ENST00000357943 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
CCNE1-202ENST00000357943 FGRP09769 529 aa17.63■□□□□ 0.41
CCNE1-202ENST00000357943 SHROOM1Q2M3G4 852 aaPredicted RBP17.63■□□□□ 0.41
CCNE1-202ENST00000357943 RNF20Q5VTR2 975 aa17.63■□□□□ 0.41
CCNE1-202ENST00000357943 MFSD6Q6ZSS7 791 aa17.63■□□□□ 0.41
CCNE1-202ENST00000357943 GBA2Q9HCG7 927 aaPredicted RBP17.63■□□□□ 0.41
CCNE1-202ENST00000357943 ZNF112Q9UJU3 913 aa17.63■□□□□ 0.41
CCNE1-202ENST00000357943 NEDD4P46934 1319 aa17.63■□□□□ 0.41
CCNE1-202ENST00000357943 E7EWF7 191 aa17.62■□□□□ 0.41
CCNE1-202ENST00000357943 GDF11O95390 407 aa17.62■□□□□ 0.41
CCNE1-202ENST00000357943 RASA1P20936 1047 aa17.62■□□□□ 0.41
CCNE1-202ENST00000357943 INPP5BP32019 993 aa17.62■□□□□ 0.41
CCNE1-202ENST00000357943 MAP3K11Q16584 847 aa17.62■□□□□ 0.41
CCNE1-202ENST00000357943 CERKLQ49MI3 558 aaPredicted RBP17.62■□□□□ 0.41
CCNE1-202ENST00000357943 RRP12Q5JTH9 1297 aaKnown RBP17.62■□□□□ 0.41
CCNE1-202ENST00000357943 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.62■□□□□ 0.41
CCNE1-202ENST00000357943 KCNB2Q92953 911 aa17.62■□□□□ 0.41
CCNE1-202ENST00000357943 ZKSCAN4Q969J2 545 aaPredicted RBP17.62■□□□□ 0.41
CCNE1-202ENST00000357943 RNF41Q9H4P4 317 aaPredicted RBP17.62■□□□□ 0.41
CCNE1-202ENST00000357943 TOMM22Q9NS69 142 aa17.62■□□□□ 0.41
CCNE1-202ENST00000357943 LAMA4Q16363 1823 aa17.62■□□□□ 0.41
CCNE1-202ENST00000357943 JAG1P78504 1218 aa17.61■□□□□ 0.41
CCNE1-202ENST00000357943 ARMC9Q7Z3E5 817 aa17.61■□□□□ 0.41
CCNE1-202ENST00000357943 ZNF287Q9HBT7 754 aa17.61■□□□□ 0.41
CCNE1-202ENST00000357943 TAOK2Q9UL54 1235 aa17.61■□□□□ 0.41
CCNE1-202ENST00000357943 SNX14Q9Y5W7 946 aa17.61■□□□□ 0.41
CCNE1-202ENST00000357943 UBE2Q2LH0YL09 131 aa17.61■□□□□ 0.41
CCNE1-202ENST00000357943 ZKSCAN1P17029 563 aaPredicted RBP17.61■□□□□ 0.41
CCNE1-202ENST00000357943 MCCP23508 829 aa17.61■□□□□ 0.41
CCNE1-202ENST00000357943 IREB2P48200 963 aaKnown RBP17.61■□□□□ 0.41
CCNE1-202ENST00000357943 COL9A3Q14050 684 aaPredicted RBP17.61■□□□□ 0.41
CCNE1-202ENST00000357943 ADCK5Q3MIX3 580 aa17.61■□□□□ 0.41
CCNE1-202ENST00000357943 TSGA10IPQ3SY00 556 aa17.61■□□□□ 0.41
CCNE1-202ENST00000357943 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms