RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 KRT71Q3SY84 523 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 ATP2A3Q93084 1043 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 ZMAT2Q96NC0 199 aaKnown RBP14.27□□□□□ -0.13
SMC4-202ENST00000357388 ZKSCAN3Q9BRR0 538 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 CAPS2Q9BXY5 557 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 SYNRGQ9UMZ2 1314 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 EFCAB8A8MWE9 144 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 STX10O60499 249 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 IDI1Q13907 227 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 WDR44Q5JSH3 913 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 SLC9C2Q5TAH2 1124 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 RASEFQ8IZ41 740 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 XAGE3Q8WTP9 111 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 FAM212AQ96EL1 285 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 EFCC1Q9HA90 598 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 DENND4BO75064 1496 aaPredicted RBP14.26□□□□□ -0.13
SMC4-202ENST00000357388 RASIP1Q5U651 963 aa14.26□□□□□ -0.13
SMC4-202ENST00000357388 RGS16O15492 202 aaPredicted RBP14.26□□□□□ -0.13
SMC4-202ENST00000357388 CALUO43852 315 aaPredicted RBP14.26□□□□□ -0.13
SMC4-202ENST00000357388 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
SMC4-202ENST00000357388 DKC1O60832 514 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMC4-202ENST00000357388 C8orf37Q96NL8 207 aa14.26□□□□□ -0.13
SMC4-202ENST00000357388 ASIC3Q9UHC3 531 aa14.26□□□□□ -0.13
SMC4-202ENST00000357388 DMTNQ08495 405 aa14.26□□□□□ -0.13
SMC4-202ENST00000357388 DBN1Q16643 649 aa14.26□□□□□ -0.13
SMC4-202ENST00000357388 AKAP4Q5JQC9 854 aa14.26□□□□□ -0.13
SMC4-202ENST00000357388 RBM26Q5T8P6 1007 aaKnown RBP14.26□□□□□ -0.13
SMC4-202ENST00000357388 CEBPAP49715 358 aaPredicted RBP14.25□□□□□ -0.13
SMC4-202ENST00000357388 CREB3L3Q68CJ9 461 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 DZIP3Q86Y13 1208 aaKnown RBP14.25□□□□□ -0.13
SMC4-202ENST00000357388 ACSBG1Q96GR2 724 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 CUTAO60888 179 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 KRT15P19012 456 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 RNASELQ05823 741 aaKnown RBP14.25□□□□□ -0.13
SMC4-202ENST00000357388 RPS6KA1Q15418 735 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 DPH6Q7L8W6 267 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 RBM17Q96I25 401 aaKnown RBP14.25□□□□□ -0.13
SMC4-202ENST00000357388 GPHNQ9NQX3 736 aaPredicted RBP14.25□□□□□ -0.13
SMC4-202ENST00000357388 LDHBP07195 334 aaKnown RBP14.25□□□□□ -0.13
SMC4-202ENST00000357388 PPP1R21Q6ZMI0 780 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 CBX8Q9HC52 389 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 MBIPQ9NS73 344 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 TMOD4Q9NZQ9 345 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 NSFL1CQ9UNZ2 370 aaKnown RBP14.25□□□□□ -0.13
SMC4-202ENST00000357388 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 TNRQ92752 1358 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 GRM8O00222 908 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 KSR2Q6VAB6 950 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 COPS6Q7L5N1 327 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 SMIM24O75264 130 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 FLOT1O75955 427 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 IL2RBP14784 551 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 PAK1Q13153 545 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 KIFC2Q96AC6 838 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 MCM9Q9NXL9 1143 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 STK38LQ9Y2H1 464 aa14.25□□□□□ -0.13
SMC4-202ENST00000357388 NMIQ13287 307 aaPredicted RBP14.24□□□□□ -0.13
SMC4-202ENST00000357388 PDCD2Q16342 344 aaPredicted RBP14.24□□□□□ -0.13
SMC4-202ENST00000357388 LMBR1LQ6UX01 489 aa14.24□□□□□ -0.13
SMC4-202ENST00000357388 TRAF5O00463 557 aa14.24□□□□□ -0.13
SMC4-202ENST00000357388 CEP104O60308 925 aa14.24□□□□□ -0.13
SMC4-202ENST00000357388 CCT6AP40227 531 aaKnown RBP14.24□□□□□ -0.13
SMC4-202ENST00000357388 MAGEA1P43355 309 aa14.24□□□□□ -0.13
SMC4-202ENST00000357388 PPP4R1Q8TF05 950 aa14.24□□□□□ -0.13
SMC4-202ENST00000357388 PICK1Q9NRD5 415 aa14.24□□□□□ -0.13
SMC4-202ENST00000357388 TPX2Q9ULW0 747 aaKnown RBP14.24□□□□□ -0.13
SMC4-202ENST00000357388 MAP3K1Q13233 1512 aa14.24□□□□□ -0.13
SMC4-202ENST00000357388 LPXNO60711 386 aa14.24□□□□□ -0.13
SMC4-202ENST00000357388 FBXO31Q5XUX0 539 aaPredicted RBP14.24□□□□□ -0.13
SMC4-202ENST00000357388 TACO1Q9BSH4 297 aaKnown RBP14.24□□□□□ -0.13
SMC4-202ENST00000357388 TIAM1Q13009 1591 aa14.24□□□□□ -0.13
SMC4-202ENST00000357388 STK32BQ9NY57 414 aa14.24□□□□□ -0.13
SMC4-202ENST00000357388 ZBTB24O43167 697 aaPredicted RBP14.23□□□□□ -0.13
SMC4-202ENST00000357388 PHBP35232 272 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 TRIM68Q6AZZ1 485 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 SAR1BQ9Y6B6 198 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 IVNS1ABPQ9Y6Y0 642 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 KRT3P12035 628 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 DCAF17Q5H9S7 520 aaPredicted RBP14.23□□□□□ -0.13
SMC4-202ENST00000357388 TRIM58Q8NG06 486 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 LRRC2Q9BYS8 371 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 DRC3Q9H069 523 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 GOLGA8QA0A0J9YX86 632 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 GOLGA8OA6NCC3 632 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 GOLGA8NF8WBI6 632 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 RNF113AO15541 343 aaKnown RBP14.23□□□□□ -0.13
SMC4-202ENST00000357388 CTNNA1P35221 906 aaKnown RBP14.23□□□□□ -0.13
SMC4-202ENST00000357388 CCDC84Q86UT8 332 aaPredicted RBP14.23□□□□□ -0.13
SMC4-202ENST00000357388 SIRT1Q96EB6 747 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 RILPQ96NA2 401 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 USP26Q9BXU7 913 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 GLT8D2Q9H1C3 349 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 HAUS2Q9NVX0 235 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 IQSEC3Q9UPP2 1182 aaPredicted RBP14.23□□□□□ -0.13
SMC4-202ENST00000357388 ARMC9Q7Z3E5 817 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 PPANQ9NQ55 473 aaKnown RBP14.23□□□□□ -0.13
SMC4-202ENST00000357388 WWC3Q9ULE0 1092 aa14.23□□□□□ -0.13
SMC4-202ENST00000357388 LRRC23Q53EV4 343 aaPredicted RBP14.22□□□□□ -0.13
SMC4-202ENST00000357388 CCDC93Q567U6 631 aa14.22□□□□□ -0.13
SMC4-202ENST00000357388 GRK7Q8WTQ7 553 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms