RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 RFX7Q2KHR2 1363 aa4.84□□□□□ -1.63
CNOT4-202ENST00000356162 NAV1Q8NEY1 1877 aa4.84□□□□□ -1.63
CNOT4-202ENST00000356162 DDX60LQ5H9U9 1706 aaKnown RBP4.84□□□□□ -1.63
CNOT4-202ENST00000356162 WNT10BO00744 389 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 MYO1BO43795 1136 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 HSPA6P17066 643 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 PRDX5P30044 214 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 COPS2P61201 443 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 GSTO1P78417 241 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 GRIK5Q16478 980 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 MAP1SQ66K74 1059 aaPredicted RBP4.84□□□□□ -1.64
CNOT4-202ENST00000356162 ERICH6Q7L0X2 663 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 DZIP1Q86YF9 867 aaKnown RBP4.84□□□□□ -1.64
CNOT4-202ENST00000356162 SMC5Q8IY18 1101 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 CNTROBQ8N137 903 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 ZDHHC15Q96MV8 337 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 POLR2AP24928 1970 aaKnown RBP4.84□□□□□ -1.64
CNOT4-202ENST00000356162 MROH7-TTC4A0A0A0MT08 1334 aa4.84□□□□□ -1.64
CNOT4-202ENST00000356162 SMARCA5O60264 1052 aaPredicted RBP4.83□□□□□ -1.64
CNOT4-202ENST00000356162 MAP4K4O95819 1239 aaPredicted RBP4.83□□□□□ -1.64
CNOT4-202ENST00000356162 CFHP08603 1231 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 ATP5JP18859 108 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 IRX6P78412 446 aaPredicted RBP4.83□□□□□ -1.64
CNOT4-202ENST00000356162 TTF1Q15361 905 aaPredicted RBP4.83□□□□□ -1.64
CNOT4-202ENST00000356162 ANGEL2Q5VTE6 544 aaKnown RBP4.83□□□□□ -1.64
CNOT4-202ENST00000356162 PI16Q6UXB8 463 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 CDC37L1Q7L3B6 337 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 SULF1Q8IWU6 871 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 PHOX2BQ99453 314 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 TMOD2Q9NZR1 351 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 DAGLAQ9Y4D2 1042 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 PCDHB3Q9Y5E6 796 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 COL2A1P02458 1487 aaPredicted RBP4.83□□□□□ -1.64
CNOT4-202ENST00000356162 AOX1Q06278 1338 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 TTC41PQ6P2S7 1318 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 SALL3Q9BXA9 1300 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 LAMB1P07942 1786 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 OTOFQ9HC10 1997 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 ADM5C9JUS6 153 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 ACTN4O43707 911 aaKnown RBP4.83□□□□□ -1.64
CNOT4-202ENST00000356162 NEFLP07196 543 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 LDHCP07864 332 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 ZAP70P43403 619 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 RBM5P52756 815 aaKnown RBP eCLIP4.83□□□□□ -1.64
CNOT4-202ENST00000356162 TNFAIP1Q13829 316 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 NBPF9Q3BBW0 867 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 KMT5BQ4FZB7 885 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 KRT26Q7Z3Y9 468 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 HAUS7Q99871 368 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 GLIS2Q9BZE0 524 aaPredicted RBP4.83□□□□□ -1.64
CNOT4-202ENST00000356162 ECHDC1Q9NTX5 307 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 ZNF70Q9UC06 446 aaPredicted RBP4.83□□□□□ -1.64
CNOT4-202ENST00000356162 AK9Q5TCS8 1911 aa4.83□□□□□ -1.64
CNOT4-202ENST00000356162 ASTN2O75129 1339 aaPredicted RBP4.83□□□□□ -1.64
CNOT4-202ENST00000356162 CYP2E1P05181 493 aaPredicted RBP4.82□□□□□ -1.64
CNOT4-202ENST00000356162 MECOMQ03112 1051 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 FKBP1CQ5VVH2 108 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 USP48Q86UV5 1035 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 CERS3Q8IU89 383 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 NKX2-3Q8TAU0 364 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 NSUN4Q96CB9 384 aaKnown RBP4.82□□□□□ -1.64
CNOT4-202ENST00000356162 CDCA5Q96FF9 252 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 PIH1D3Q9NQM4 214 aaKnown RBP4.82□□□□□ -1.64
CNOT4-202ENST00000356162 SNRKQ9NRH2 765 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 RAI14Q9P0K7 980 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 LRP2BPQ9P2M1 347 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 DAXXQ9UER7 740 aaPredicted RBP4.82□□□□□ -1.64
CNOT4-202ENST00000356162 ABCF2Q9UG63 623 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 PCDHAC2Q9Y5I4 1007 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 SSC5DA1L4H1 1573 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 GOLGB1Q14789 3259 aaKnown RBP4.82□□□□□ -1.64
CNOT4-202ENST00000356162 CLRN2A0PK11 232 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 TMEM88BA6NKF7 163 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 ERC2O15083 957 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 GLRX3O76003 335 aaKnown RBP4.82□□□□□ -1.64
CNOT4-202ENST00000356162 TNNI2P48788 182 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 NUCB1Q02818 461 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 DIXDC1Q155Q3 683 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 ANKRD45Q5TZF3 282 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 NAA16Q6N069 864 aaPredicted RBP4.82□□□□□ -1.64
CNOT4-202ENST00000356162 APOBEC3HQ6NTF7 200 aaKnown RBP4.82□□□□□ -1.64
CNOT4-202ENST00000356162 BLOC1S3Q6QNY0 202 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 PRMT6Q96LA8 375 aaPredicted RBP4.82□□□□□ -1.64
CNOT4-202ENST00000356162 DNAJC2Q99543 621 aaKnown RBP4.82□□□□□ -1.64
CNOT4-202ENST00000356162 NOL10Q9BSC4 688 aaKnown RBP4.82□□□□□ -1.64
CNOT4-202ENST00000356162 VEZTQ9HBM0 779 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 PAG1Q9NWQ8 432 aa4.82□□□□□ -1.64
CNOT4-202ENST00000356162 GPR75-ASB3A0A0A6YYF3 556 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 TRAF5O00463 557 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 CELF2O95319 508 aaKnown RBP4.81□□□□□ -1.64
CNOT4-202ENST00000356162 IGHDP01880 384 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 MX1P20591 662 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 NF2P35240 595 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 BTDP43251 543 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 FKBP1BP68106 108 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 MAP3K12Q12852 859 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 MAP2K5Q13163 448 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 PPP1R18Q6NYC8 613 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 TBC1D9Q6ZT07 1266 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms