RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 AMOTL1Q8IY63 956 aa13.91□□□□□ -0.18
SIRPA-201ENST00000356025 SETDB2Q96T68 719 aa13.91□□□□□ -0.18
SIRPA-201ENST00000356025 FAM208AQ9UK61 1670 aaKnown RBP13.91□□□□□ -0.18
SIRPA-201ENST00000356025 PALLDQ8WX93 1383 aa13.91□□□□□ -0.18
SIRPA-201ENST00000356025 TPM1P09493 284 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 CYP2D6P10635 497 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 EPSTI1Q96J88 318 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 XRN1Q8IZH2 1706 aaKnown RBP13.9□□□□□ -0.18
SIRPA-201ENST00000356025 MROH7-TTC4A0A0A0MT08 1334 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 EIF6P56537 245 aaKnown RBP13.9□□□□□ -0.18
SIRPA-201ENST00000356025 ERCC6LQ2NKX8 1250 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 SHC4Q6S5L8 630 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 GPKOWQ92917 476 aaPredicted RBP eCLIP13.9□□□□□ -0.18
SIRPA-201ENST00000356025 NLRP3Q96P20 1036 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 CPVLQ9H3G5 476 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 POLR3EQ9NVU0 708 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 MST1RQ04912 1400 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 MROH5Q6ZUA9 1318 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 GSG1L2A8MUP6 293 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 PLEKHA8P1O95397 391 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 SSBP05455 408 aaKnown RBP eCLIP13.9□□□□□ -0.18
SIRPA-201ENST00000356025 GOLGA8HP0CJ92 632 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 HEATR3Q7Z4Q2 680 aa13.9□□□□□ -0.18
SIRPA-201ENST00000356025 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.9□□□□□ -0.18
SIRPA-201ENST00000356025 RRAGBQ5VZM2 374 aa13.9□□□□□ -0.19
SIRPA-201ENST00000356025 ALDH8A1Q9H2A2 487 aaPredicted RBP13.9□□□□□ -0.19
SIRPA-201ENST00000356025 LY9Q9HBG7 655 aa13.9□□□□□ -0.19
SIRPA-201ENST00000356025 PAXBP1Q9Y5B6 917 aa13.9□□□□□ -0.19
SIRPA-201ENST00000356025 ZSCAN20P17040 1043 aaPredicted RBP13.89□□□□□ -0.19
SIRPA-201ENST00000356025 CSRNP2Q9H175 543 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 CSF1RP07333 972 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 DMTNQ08495 405 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 ATL3Q6DD88 541 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 CELF1Q92879 486 aaKnown RBP13.89□□□□□ -0.19
SIRPA-201ENST00000356025 VPS16Q9H269 839 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 SAMSN1Q9NSI8 373 aaKnown RBP13.89□□□□□ -0.19
SIRPA-201ENST00000356025 TOPAZ1Q8N9V7 1692 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 NEMFO60524 1076 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 IL6STP40189 918 aaPredicted RBP13.89□□□□□ -0.19
SIRPA-201ENST00000356025 POSTNQ15063 836 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 FILIP1LQ4L180 1135 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 MEX3CQ5U5Q3 659 aaKnown RBP13.89□□□□□ -0.19
SIRPA-201ENST00000356025 ENGASEQ8NFI3 743 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 MRFAP1L1Q96HT8 127 aa13.89□□□□□ -0.19
SIRPA-201ENST00000356025 SOS2Q07890 1332 aaPredicted RBP13.88□□□□□ -0.19
SIRPA-201ENST00000356025 DEXIO95424 95 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 KRBA2Q6ZNG9 492 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 IL17RAQ96F46 866 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 EPC1Q9H2F5 836 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 C6orf229H3BNL8 230 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 EVX2Q03828 476 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 PICALMQ13492 652 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 TSR1Q2NL82 804 aaKnown RBP13.88□□□□□ -0.19
SIRPA-201ENST00000356025 ZNF444Q8N0Y2 327 aaPredicted RBP13.88□□□□□ -0.19
SIRPA-201ENST00000356025 ZHX3Q9H4I2 956 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 KAT14Q9H8E8 782 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 CEP131Q9UPN4 1083 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 N4BP3O15049 544 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 ENOX2Q16206 610 aaKnown RBP13.88□□□□□ -0.19
SIRPA-201ENST00000356025 ARHGAP29Q52LW3 1261 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 CCDC150Q8NCX0 1101 aa13.88□□□□□ -0.19
SIRPA-201ENST00000356025 CCDC194A0A1B0GVG4 234 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 A0A1W2PQ27 194 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 A0A1W2PQ64 194 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 A0A1W2PQD8 194 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 FAM170AA1A519 330 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 FOXP2O15409 715 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 KLRK1P26718 216 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 PRDX5P30044 214 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 ANKRD20A12PQ8NF67 263 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 CCDC12Q8WUD4 166 aaPredicted RBP13.87□□□□□ -0.19
SIRPA-201ENST00000356025 DYNLL2Q96FJ2 89 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 NUP88Q99567 741 aaPredicted RBP13.87□□□□□ -0.19
SIRPA-201ENST00000356025 SLU7O95391 586 aaKnown RBP13.87□□□□□ -0.19
SIRPA-201ENST00000356025 KRT2P35908 639 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 MAPKAPK5Q8IW41 473 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 IGDCC4Q8TDY8 1250 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 SPTLC3Q9NUV7 552 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 PUF60Q9UHX1 559 aaKnown RBP13.87□□□□□ -0.19
SIRPA-201ENST00000356025 NALCNQ8IZF0 1738 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 CUTAO60888 179 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 DNA2P51530 1060 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 DIXDC1Q155Q3 683 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 CARD6Q9BX69 1037 aa13.87□□□□□ -0.19
SIRPA-201ENST00000356025 CRNKL1Q9BZJ0 848 aaKnown RBP13.87□□□□□ -0.19
SIRPA-201ENST00000356025 RIMBP2O15034 1052 aa13.86□□□□□ -0.19
SIRPA-201ENST00000356025 ITPK1Q13572 414 aa13.86□□□□□ -0.19
SIRPA-201ENST00000356025 NOM1Q5C9Z4 860 aaKnown RBP13.86□□□□□ -0.19
SIRPA-201ENST00000356025 NBPF3Q9H094 633 aa13.86□□□□□ -0.19
SIRPA-201ENST00000356025 HIBADHP31937 336 aaKnown RBP13.86□□□□□ -0.19
SIRPA-201ENST00000356025 TXLNAP40222 546 aa13.86□□□□□ -0.19
SIRPA-201ENST00000356025 RILPL1Q5EBL4 403 aa13.86□□□□□ -0.19
SIRPA-201ENST00000356025 DACH1Q9UI36 760 aa13.86□□□□□ -0.19
SIRPA-201ENST00000356025 CTNND2Q9UQB3 1225 aa13.86□□□□□ -0.19
SIRPA-201ENST00000356025 USP17L8P0C7I0 530 aa13.86□□□□□ -0.19
SIRPA-201ENST00000356025 CASQ1P31415 396 aa13.86□□□□□ -0.19
SIRPA-201ENST00000356025 ADGRA1Q86SQ6 560 aa13.86□□□□□ -0.19
SIRPA-201ENST00000356025 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
SIRPA-201ENST00000356025 TSPY3P0CV98 308 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms