RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ORC4O43929 436 aa29.98■■■□□ 2.39
CLK2-201ENST00000355560 NTRK3Q16288 839 aa29.98■■■□□ 2.39
CLK2-201ENST00000355560 SLC4A8Q2Y0W8 1093 aa29.98■■■□□ 2.39
CLK2-201ENST00000355560 DEFB132Q7Z7B7 95 aa29.98■■■□□ 2.39
CLK2-201ENST00000355560 IQCA1Q86XH1 822 aa29.98■■■□□ 2.39
CLK2-201ENST00000355560 CERS3Q8IU89 383 aa29.98■■■□□ 2.39
CLK2-201ENST00000355560 PHKBQ93100 1093 aa29.97■■■□□ 2.39
CLK2-201ENST00000355560 SPATA32Q96LK8 384 aa29.97■■■□□ 2.39
CLK2-201ENST00000355560 GPR75-ASB3A0A0A6YYF3 556 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 CHRNA5P30532 468 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 OTUD7BQ6GQQ9 843 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 SLF2Q8IX21 1173 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 ZNF654Q8IZM8 581 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 ENAHQ8N8S7 591 aaPredicted RBP29.96■■■□□ 2.39
CLK2-201ENST00000355560 TGFBRAP1Q8WUH2 860 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 FBXW7Q969H0 707 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 CDK5RAP2Q96SN8 1893 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 SLX4Q8IY92 1834 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 MRE11P49959 708 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 PDE4BQ07343 736 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 FBXO18Q8NFZ0 1043 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 GRPEL1Q9HAV7 217 aa29.96■■■□□ 2.39
CLK2-201ENST00000355560 ECM29Q5VYK3 1845 aa29.95■■■□□ 2.39
CLK2-201ENST00000355560 DOK7Q18PE1 504 aa29.95■■■□□ 2.39
CLK2-201ENST00000355560 EYA3Q99504 573 aa29.95■■■□□ 2.39
CLK2-201ENST00000355560 IARSP41252 1262 aaKnown RBP29.95■■■□□ 2.38
CLK2-201ENST00000355560 RCAN1P53805 252 aa29.95■■■□□ 2.38
CLK2-201ENST00000355560 RTN1Q16799 776 aa29.95■■■□□ 2.38
CLK2-201ENST00000355560 C12orf60Q5U649 245 aa29.95■■■□□ 2.38
CLK2-201ENST00000355560 PDGFDQ9GZP0 370 aaPredicted RBP29.95■■■□□ 2.38
CLK2-201ENST00000355560 GAKO14976 1311 aa29.94■■■□□ 2.38
CLK2-201ENST00000355560 SYCE3A1L190 88 aa29.94■■■□□ 2.38
CLK2-201ENST00000355560 LEO1Q8WVC0 666 aaPredicted RBP29.94■■■□□ 2.38
CLK2-201ENST00000355560 FAM163AQ96GL9 167 aaPredicted RBP29.94■■■□□ 2.38
CLK2-201ENST00000355560 DLEC1Q9Y238 1755 aa29.94■■■□□ 2.38
CLK2-201ENST00000355560 XRCC6P12956 609 aaKnown RBP eCLIP29.93■■■□□ 2.381e-7■■■■■ 61.2
CLK2-201ENST00000355560 AMOTL1Q8IY63 956 aa29.93■■■□□ 2.38
CLK2-201ENST00000355560 NUP133Q8WUM0 1156 aa29.93■■■□□ 2.38
CLK2-201ENST00000355560 GJB4Q9NTQ9 266 aa29.93■■■□□ 2.38
CLK2-201ENST00000355560 CFAP45Q9UL16 551 aa29.93■■■□□ 2.38
CLK2-201ENST00000355560 G3V3G9 751 aa29.93■■■□□ 2.38
CLK2-201ENST00000355560 IFIT1BQ5T764 474 aaKnown RBP29.93■■■□□ 2.38
CLK2-201ENST00000355560 DCAF8Q5TAQ9 597 aa29.93■■■□□ 2.38
CLK2-201ENST00000355560 MAPKAPK5Q8IW41 473 aa29.93■■■□□ 2.38
CLK2-201ENST00000355560 ALG1Q9BT22 464 aa29.93■■■□□ 2.38
CLK2-201ENST00000355560 PLCG2P16885 1265 aa29.92■■■□□ 2.38
CLK2-201ENST00000355560 AIFM3Q96NN9 605 aa29.92■■■□□ 2.38
CLK2-201ENST00000355560 ILDR1Q86SU0 546 aaPredicted RBP29.92■■■□□ 2.38
CLK2-201ENST00000355560 CNKSR1Q969H4 720 aa29.92■■■□□ 2.38
CLK2-201ENST00000355560 SUGT1Q9Y2Z0 365 aa29.92■■■□□ 2.38
CLK2-201ENST00000355560 ROBO3Q96MS0 1386 aa29.92■■■□□ 2.38
CLK2-201ENST00000355560 STK36Q9NRP7 1315 aa29.91■■■□□ 2.38
CLK2-201ENST00000355560 IFNAR1P17181 557 aa29.91■■■□□ 2.38
CLK2-201ENST00000355560 FAM47AQ5JRC9 791 aa29.91■■■□□ 2.38
CLK2-201ENST00000355560 TEX11Q8IYF3 940 aa29.91■■■□□ 2.38
CLK2-201ENST00000355560 FANCBQ8NB91 859 aa29.91■■■□□ 2.38
CLK2-201ENST00000355560 ZNF219Q9P2Y4 722 aaPredicted RBP29.91■■■□□ 2.38
CLK2-201ENST00000355560 CCDC196A0A1B0GTZ2 297 aa29.9■■■□□ 2.38
CLK2-201ENST00000355560 CERS5Q8N5B7 392 aa29.9■■■□□ 2.38
CLK2-201ENST00000355560 SLC26A6Q9BXS9 759 aa29.9■■■□□ 2.38
CLK2-201ENST00000355560 RHBDL3P58872 404 aa29.9■■■□□ 2.38
CLK2-201ENST00000355560 SSRP1Q08945 709 aaKnown RBP29.9■■■□□ 2.38
CLK2-201ENST00000355560 DAGLAQ9Y4D2 1042 aa29.9■■■□□ 2.38
CLK2-201ENST00000355560 DDX60LQ5H9U9 1706 aaKnown RBP29.89■■■□□ 2.38
CLK2-201ENST00000355560 TSPY2A6NKD2 308 aa29.89■■■□□ 2.38
CLK2-201ENST00000355560 F8W031 263 aaPredicted RBP29.89■■■□□ 2.38
CLK2-201ENST00000355560 FMNL1O95466 1100 aaPredicted RBP29.89■■■□□ 2.38
CLK2-201ENST00000355560 RGS22Q8NE09 1264 aa29.89■■■□□ 2.38
CLK2-201ENST00000355560 SAP30BPQ9UHR5 308 aaKnown RBP29.89■■■□□ 2.38
CLK2-201ENST00000355560 NMT2O60551 498 aa29.89■■■□□ 2.37
CLK2-201ENST00000355560 CEBPZQ03701 1054 aaKnown RBP29.89■■■□□ 2.37
CLK2-201ENST00000355560 DYNLL2Q96FJ2 89 aa29.89■■■□□ 2.37
CLK2-201ENST00000355560 DBNDD1Q9H9R9 158 aa29.89■■■□□ 2.37
CLK2-201ENST00000355560 POLR3DP05423 398 aaPredicted RBP29.88■■■□□ 2.37
CLK2-201ENST00000355560 CCDC183Q5T5S1 534 aa29.88■■■□□ 2.37
CLK2-201ENST00000355560 LRSAM1Q6UWE0 723 aa29.88■■■□□ 2.37
CLK2-201ENST00000355560 CATIPQ7Z7H3 387 aa29.88■■■□□ 2.37
CLK2-201ENST00000355560 ZNF396Q96N95 335 aaPredicted RBP29.88■■■□□ 2.37
CLK2-201ENST00000355560 MXD3Q9BW11 206 aa29.88■■■□□ 2.37
CLK2-201ENST00000355560 FLT1P17948 1338 aa29.88■■■□□ 2.37
CLK2-201ENST00000355560 ATL3Q6DD88 541 aa29.87■■■□□ 2.37
CLK2-201ENST00000355560 FTOQ9C0B1 505 aaKnown RBP eCLIP29.87■■■□□ 2.37
CLK2-201ENST00000355560 TAOK2Q9UL54 1235 aa29.87■■■□□ 2.37
CLK2-201ENST00000355560 GOLGA6L4A6NEF3 574 aa29.87■■■□□ 2.37
CLK2-201ENST00000355560 TRIM22Q8IYM9 498 aa29.87■■■□□ 2.37
CLK2-201ENST00000355560 USP28Q96RU2 1077 aa29.87■■■□□ 2.37
CLK2-201ENST00000355560 TTF2Q9UNY4 1162 aaKnown RBP29.87■■■□□ 2.37
CLK2-201ENST00000355560 UBE2Q2LH0YL09 131 aa29.86■■■□□ 2.37
CLK2-201ENST00000355560 PLCD1P51178 756 aa29.86■■■□□ 2.37
CLK2-201ENST00000355560 PODNQ7Z5L7 613 aa29.86■■■□□ 2.37
CLK2-201ENST00000355560 KIF23Q02241 960 aaPredicted RBP29.86■■■□□ 2.37
CLK2-201ENST00000355560 PPP2R5BQ15173 497 aa29.86■■■□□ 2.37
CLK2-201ENST00000355560 KRT40Q6A162 431 aa29.86■■■□□ 2.37
CLK2-201ENST00000355560 CMTR1Q8N1G2 835 aaKnown RBP29.86■■■□□ 2.37
CLK2-201ENST00000355560 CCDC82Q8N4S0 544 aa29.86■■■□□ 2.37
CLK2-201ENST00000355560 FOCADQ5VW36 1801 aa29.85■■■□□ 2.37
CLK2-201ENST00000355560 GOLGB1Q14789 3259 aaKnown RBP29.85■■■□□ 2.37
CLK2-201ENST00000355560 BRAPQ7Z569 592 aa29.85■■■□□ 2.37
CLK2-201ENST00000355560 NBPF11Q86T75 865 aa29.85■■■□□ 2.37
CLK2-201ENST00000355560 PANK2Q9BZ23 570 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms