RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 TNNT1P13805 278 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 CCT6AP40227 531 aaKnown RBP11.02□□□□□ -0.65
GABPA-201ENST00000354828 GNPTABQ3T906 1256 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 ARHGEF16Q5VV41 709 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 PIK3AP1Q6ZUJ8 805 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 MIGA2Q7L4E1 593 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 TESPA1A2RU30 521 aaPredicted RBP11.02□□□□□ -0.65
GABPA-201ENST00000354828 LPXNO60711 386 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 CYP19A1P11511 503 aaPredicted RBP11.02□□□□□ -0.65
GABPA-201ENST00000354828 EP400NLQ6ZTU2 488 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 IFNL3Q8IZI9 196 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 UIMC1Q96RL1 719 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 COPRSQ9NQ92 184 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 FRMPD1Q5SYB0 1578 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 CCNT1O60563 726 aaKnown RBP11.01□□□□□ -0.65
GABPA-201ENST00000354828 RFX1P22670 979 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 DNM2P50570 870 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 NLRX1Q86UT6 975 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 AOX1Q06278 1338 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 CIAO1O76071 339 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 TOP1P11387 765 aaKnown RBP11.01□□□□□ -0.65
GABPA-201ENST00000354828 CHRNA5P30532 468 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 EZH2Q15910 746 aaKnown RBP11.01□□□□□ -0.65
GABPA-201ENST00000354828 SLFN13Q68D06 897 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 IFT74Q96LB3 600 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 NBPF3Q9H094 633 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 BSDC1Q9NW68 430 aaPredicted RBP11.01□□□□□ -0.65
GABPA-201ENST00000354828 FRMPD2Q68DX3 1309 aaPredicted RBP11.01□□□□□ -0.65
GABPA-201ENST00000354828 CTNNA2P26232 953 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 AOC3Q16853 763 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 SPICE1Q8N0Z3 855 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 CCDC97Q96F63 343 aaPredicted RBP11.01□□□□□ -0.65
GABPA-201ENST00000354828 DLC1Q96QB1 1528 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 TMEM232C9JQI7 657 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 KIF4AO95239 1232 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 USP14P54578 494 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 NFIXQ14938 502 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 HSP90B2PQ58FF3 399 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 NCAPH2Q6IBW4 605 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 ZNF354CQ86Y25 554 aa11.01□□□□□ -0.65
GABPA-201ENST00000354828 IQCA1LA6NCM1 817 aa11□□□□□ -0.65
GABPA-201ENST00000354828 SPTLC2O15270 562 aa11□□□□□ -0.65
GABPA-201ENST00000354828 RPS6KB1P23443 525 aa11□□□□□ -0.65
GABPA-201ENST00000354828 SMTNP53814 917 aa11□□□□□ -0.65
GABPA-201ENST00000354828 GRIPAP1Q4V328 841 aa11□□□□□ -0.65
GABPA-201ENST00000354828 SMIM5Q71RC9 77 aa11□□□□□ -0.65
GABPA-201ENST00000354828 MARCH10Q8NA82 808 aaPredicted RBP11□□□□□ -0.65
GABPA-201ENST00000354828 TBC1D32Q96NH3 1257 aa11□□□□□ -0.65
GABPA-201ENST00000354828 GDF11O95390 407 aa11□□□□□ -0.65
GABPA-201ENST00000354828 TXKP42681 527 aa11□□□□□ -0.65
GABPA-201ENST00000354828 SPAG5Q96R06 1193 aa11□□□□□ -0.65
GABPA-201ENST00000354828 PRKAG2Q9UGJ0 569 aa11□□□□□ -0.65
GABPA-201ENST00000354828 hCG_1642624A0A1W2PR95 340 aa11□□□□□ -0.65
GABPA-201ENST00000354828 PSMA7O14818 248 aa11□□□□□ -0.65
GABPA-201ENST00000354828 YEATS4O95619 227 aa11□□□□□ -0.65
GABPA-201ENST00000354828 CTNNBL1Q8WYA6 563 aaPredicted RBP11□□□□□ -0.65
GABPA-201ENST00000354828 CCDC17Q96LX7 622 aa11□□□□□ -0.65
GABPA-201ENST00000354828 MRPL11Q9Y3B7 192 aaKnown RBP11□□□□□ -0.65
GABPA-201ENST00000354828 SPATA31A5Q5VU36 1347 aa11□□□□□ -0.65
GABPA-201ENST00000354828 SPATA31A7Q8IWB4 1347 aa11□□□□□ -0.65
GABPA-201ENST00000354828 ARHGEF35A5YM69 484 aa11□□□□□ -0.65
GABPA-201ENST00000354828 VWA3AA6NCI4 1184 aa11□□□□□ -0.65
GABPA-201ENST00000354828 ARID4AP29374 1257 aaPredicted RBP11□□□□□ -0.65
GABPA-201ENST00000354828 NONOQ15233 471 aaKnown RBP eCLIP11□□□□□ -0.655e-7■■■■□ 24.5
GABPA-201ENST00000354828 HAUS3Q68CZ6 603 aa11□□□□□ -0.65
GABPA-201ENST00000354828 PTPRUQ92729 1446 aa11□□□□□ -0.65
GABPA-201ENST00000354828 DNA2P51530 1060 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 PDE4DQ08499 809 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 LRSAM1Q6UWE0 723 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 BARGINQ6ZT62 677 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 MAEAQ7L5Y9 396 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 MRPS27Q92552 414 aaKnown RBP10.99□□□□□ -0.65
GABPA-201ENST00000354828 ECE2O60344 883 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 SORBS3O60504 671 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 SFPQP23246 707 aaKnown RBP eCLIP10.99□□□□□ -0.65
GABPA-201ENST00000354828 TTLL11Q8NHH1 800 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 TBC1D5Q92609 795 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 BRIP1Q9BX63 1249 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 CCPG1Q9ULG6 757 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 FMNL1O95466 1100 aaPredicted RBP10.99□□□□□ -0.65
GABPA-201ENST00000354828 DIXDC1Q155Q3 683 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 NCOA5Q9HCD5 579 aaKnown RBP10.99□□□□□ -0.65
GABPA-201ENST00000354828 MRVI1Q9Y6F6 885 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 N4BP3O15049 544 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 SEPT7Q16181 437 aaKnown RBP10.99□□□□□ -0.65
GABPA-201ENST00000354828 FBXO41Q8TF61 875 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 ERCC4Q92889 916 aaPredicted RBP10.99□□□□□ -0.65
GABPA-201ENST00000354828 PNMA2Q9UL42 364 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 ABCC4O15439 1325 aa10.99□□□□□ -0.65
GABPA-201ENST00000354828 SGSM2O43147 1006 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 CCDC172P0C7W6 258 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 PPP2R5BQ15173 497 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 STX1AQ16623 288 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 KRT25Q7Z3Z0 450 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 ATP8A2Q9NTI2 1148 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 PALD1Q9ULE6 856 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 ATP10DQ9P241 1426 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 STRN3Q13033 797 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 MCF2L2Q86YR7 1114 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms