RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 CCDC150Q8NCX0 1101 aa22.5■■□□□ 1.19
COL13A1-201ENST00000354547 TIGD1Q96MW7 591 aa22.5■■□□□ 1.19
COL13A1-201ENST00000354547 ITGB4P16144 1822 aa22.5■■□□□ 1.19
COL13A1-201ENST00000354547 CYP2D7A0A087X1C5 515 aa22.49■■□□□ 1.19
COL13A1-201ENST00000354547 PRDM1O75626 825 aa22.49■■□□□ 1.19
COL13A1-201ENST00000354547 MMP1P03956 469 aa22.49■■□□□ 1.19
COL13A1-201ENST00000354547 IFNAR1P17181 557 aa22.49■■□□□ 1.19
COL13A1-201ENST00000354547 GYG1P46976 350 aa22.49■■□□□ 1.19
COL13A1-201ENST00000354547 CHRNDQ07001 517 aa22.49■■□□□ 1.19
COL13A1-201ENST00000354547 UBAC1Q9BSL1 405 aa22.49■■□□□ 1.19
COL13A1-201ENST00000354547 CABP5Q9NP86 173 aa22.49■■□□□ 1.19
COL13A1-201ENST00000354547 NUP98P52948 1817 aa22.49■■□□□ 1.19
COL13A1-201ENST00000354547 CCDC152Q4G0S7 254 aa22.49■■□□□ 1.19
COL13A1-201ENST00000354547 TRMT44Q8IYL2 757 aaKnown RBP22.49■■□□□ 1.19
COL13A1-201ENST00000354547 MYH3P11055 1940 aa22.48■■□□□ 1.19
COL13A1-201ENST00000354547 PRR29P0C7W0 189 aa22.48■■□□□ 1.19
COL13A1-201ENST00000354547 EIF5P55010 431 aaKnown RBP22.48■■□□□ 1.19
COL13A1-201ENST00000354547 INTS5Q6P9B9 1019 aaKnown RBP22.48■■□□□ 1.19
COL13A1-201ENST00000354547 USP49Q70CQ1 688 aa22.48■■□□□ 1.19
COL13A1-201ENST00000354547 FAM177A1Q8N128 213 aaPredicted RBP22.48■■□□□ 1.19
COL13A1-201ENST00000354547 SERTAD1Q9UHV2 236 aa22.48■■□□□ 1.19
COL13A1-201ENST00000354547 IKBKBO14920 756 aa22.48■■□□□ 1.19
COL13A1-201ENST00000354547 ADAMTS2O95450 1211 aa22.48■■□□□ 1.19
COL13A1-201ENST00000354547 BMP6P22004 513 aa22.48■■□□□ 1.19
COL13A1-201ENST00000354547 ELF2Q15723 593 aa22.48■■□□□ 1.19
COL13A1-201ENST00000354547 CCDC87Q9NVE4 849 aa22.48■■□□□ 1.19
COL13A1-201ENST00000354547 FAM205CA6NFA0 338 aa22.47■■□□□ 1.19
COL13A1-201ENST00000354547 NRDCO43847 1150 aa22.47■■□□□ 1.19
COL13A1-201ENST00000354547 SMAP1Q8IYB5 467 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-201ENST00000354547 ZNF654Q8IZM8 581 aa22.47■■□□□ 1.19
COL13A1-201ENST00000354547 PPARAQ07869 468 aa22.47■■□□□ 1.19
COL13A1-201ENST00000354547 BICDL1Q6ZP65 573 aa22.47■■□□□ 1.19
COL13A1-201ENST00000354547 SMIM5Q71RC9 77 aa22.47■■□□□ 1.19
COL13A1-201ENST00000354547 CRACR2BQ8N4Y2 399 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-201ENST00000354547 FANCBQ8NB91 859 aa22.47■■□□□ 1.19
COL13A1-201ENST00000354547 WASF1Q92558 559 aa22.47■■□□□ 1.19
COL13A1-201ENST00000354547 PKNOX2Q96KN3 472 aa22.47■■□□□ 1.19
COL13A1-201ENST00000354547 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.47■■□□□ 1.19
COL13A1-201ENST00000354547 SLIT2O94813 1529 aa22.46■■□□□ 1.19
COL13A1-201ENST00000354547 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.46■■□□□ 1.19
COL13A1-201ENST00000354547 CDK11BP21127 795 aaKnown RBP22.46■■□□□ 1.19
COL13A1-201ENST00000354547 KCNQ4P56696 695 aa22.46■■□□□ 1.19
COL13A1-201ENST00000354547 LRP6O75581 1613 aa22.46■■□□□ 1.19
COL13A1-201ENST00000354547 STAG1Q8WVM7 1258 aa22.46■■□□□ 1.19
COL13A1-201ENST00000354547 VPS54Q9P1Q0 977 aa22.46■■□□□ 1.19
COL13A1-201ENST00000354547 TOP1P11387 765 aaKnown RBP22.45■■□□□ 1.18
COL13A1-201ENST00000354547 DYNLL1P63167 89 aaKnown RBP22.45■■□□□ 1.18
COL13A1-201ENST00000354547 TMX1Q9H3N1 280 aa22.45■■□□□ 1.18
COL13A1-201ENST00000354547 LRRN4CLQ8ND94 238 aa22.45■■□□□ 1.18
COL13A1-201ENST00000354547 SLC4A8Q2Y0W8 1093 aa22.44■■□□□ 1.18
COL13A1-201ENST00000354547 TNKSO95271 1327 aa22.44■■□□□ 1.18
COL13A1-201ENST00000354547 AKAP17AQ02040 695 aaKnown RBP22.44■■□□□ 1.18
COL13A1-201ENST00000354547 POSTNQ15063 836 aa22.44■■□□□ 1.18
COL13A1-201ENST00000354547 ZHX1Q9UKY1 873 aaPredicted RBP22.44■■□□□ 1.18
COL13A1-201ENST00000354547 ABCA3Q99758 1704 aa22.44■■□□□ 1.18
COL13A1-201ENST00000354547 DEXIO95424 95 aa22.44■■□□□ 1.18
COL13A1-201ENST00000354547 ITPK1Q13572 414 aa22.44■■□□□ 1.18
COL13A1-201ENST00000354547 CGNQ9P2M7 1197 aaKnown RBP22.44■■□□□ 1.18
COL13A1-201ENST00000354547 DNAI1Q9UI46 699 aa22.44■■□□□ 1.18
COL13A1-201ENST00000354547 FBXO2Q9UK22 296 aaPredicted RBP22.44■■□□□ 1.18
COL13A1-201ENST00000354547 MAN1B1Q9UKM7 699 aa22.44■■□□□ 1.18
COL13A1-201ENST00000354547 MAGEB6P1A0A0J9YX57 407 aa22.43■■□□□ 1.18
COL13A1-201ENST00000354547 CAMTA2O94983 1202 aa22.43■■□□□ 1.18
COL13A1-201ENST00000354547 GNAT2P19087 354 aa22.43■■□□□ 1.18
COL13A1-201ENST00000354547 CASP1P29466 404 aa22.43■■□□□ 1.18
COL13A1-201ENST00000354547 BAZ2BQ9UIF8 2168 aaKnown RBP22.43■■□□□ 1.18
COL13A1-201ENST00000354547 STK36Q9NRP7 1315 aa22.43■■□□□ 1.18
COL13A1-201ENST00000354547 SLU7O95391 586 aaKnown RBP22.43■■□□□ 1.18
COL13A1-201ENST00000354547 ZSCAN20P17040 1043 aaPredicted RBP22.43■■□□□ 1.18
COL13A1-201ENST00000354547 AFMP43652 599 aa22.43■■□□□ 1.18
COL13A1-201ENST00000354547 FMR1Q06787 632 aaKnown RBP eCLIP22.43■■□□□ 1.18
COL13A1-201ENST00000354547 LOC102724428A0A0B4J2F2 783 aa22.42■■□□□ 1.18
COL13A1-201ENST00000354547 CBFA2T2O43439 604 aa22.42■■□□□ 1.18
COL13A1-201ENST00000354547 SIK1P57059 783 aa22.42■■□□□ 1.18
COL13A1-201ENST00000354547 CSRNP2Q9H175 543 aa22.42■■□□□ 1.18
COL13A1-201ENST00000354547 NFE2L3Q9Y4A8 694 aa22.42■■□□□ 1.18
COL13A1-201ENST00000354547 DDX60Q8IY21 1712 aaKnown RBP22.42■■□□□ 1.18
COL13A1-201ENST00000354547 EVX2Q03828 476 aa22.42■■□□□ 1.18
COL13A1-201ENST00000354547 RILPL1Q5EBL4 403 aa22.42■■□□□ 1.18
COL13A1-201ENST00000354547 KLHL10Q6JEL2 608 aa22.42■■□□□ 1.18
COL13A1-201ENST00000354547 PTPREP23469 700 aa22.41■■□□□ 1.18
COL13A1-201ENST00000354547 KMT5BQ4FZB7 885 aa22.41■■□□□ 1.18
COL13A1-201ENST00000354547 C3orf67Q6ZVT6 689 aa22.41■■□□□ 1.18
COL13A1-201ENST00000354547 SMARCE1Q969G3 411 aa22.41■■□□□ 1.18
COL13A1-201ENST00000354547 DHX58Q96C10 678 aa22.41■■□□□ 1.18
COL13A1-201ENST00000354547 RNF41Q9H4P4 317 aaPredicted RBP22.41■■□□□ 1.18
COL13A1-201ENST00000354547 V9GY48 417 aaPredicted RBP22.41■■□□□ 1.18
COL13A1-201ENST00000354547 CCDC196A0A1B0GTZ2 297 aa22.41■■□□□ 1.18
COL13A1-201ENST00000354547 MDM2Q00987 491 aaPredicted RBP22.41■■□□□ 1.18
COL13A1-201ENST00000354547 SYCP1Q15431 976 aa22.41■■□□□ 1.18
COL13A1-201ENST00000354547 DDB1Q16531 1140 aa22.41■■□□□ 1.18
COL13A1-201ENST00000354547 ERCC6LQ2NKX8 1250 aa22.41■■□□□ 1.18
COL13A1-201ENST00000354547 EARS2Q5JPH6 523 aaKnown RBP22.41■■□□□ 1.18
COL13A1-201ENST00000354547 FOXP1Q9H334 677 aaPredicted RBP22.41■■□□□ 1.18
COL13A1-201ENST00000354547 INTS13Q9NVM9 706 aa22.41■■□□□ 1.18
COL13A1-201ENST00000354547 HOOK1Q9UJC3 728 aaKnown RBP22.41■■□□□ 1.18
COL13A1-201ENST00000354547 JAG2Q9Y219 1238 aa22.41■■□□□ 1.18
COL13A1-201ENST00000354547 FAM237AA0A1B0GTK4 181 aa22.4■■□□□ 1.18
COL13A1-201ENST00000354547 NTSR2O95665 410 aa22.4■■□□□ 1.18
COL13A1-201ENST00000354547 ADKP55263 362 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms